Chapter 3 (Cell Structure & Function) Flashcards

1
Q

What are the characteristics of living things?

A

Cellularity: organized membrane bound structure that
performs life fxns
Growth: ↑ in size by assimilation (taking in nutrients & using
compounds to make new cell parts)
accumulation: packing material onto cell to make
bigger ex: like build snowman
Metabolism: ability to take in nutrients & use them to provide
energy & build structures
Reproduction: ↑ in number; asexual: prokaryotes single cell
(budding)
Sexual: 2 parental cells
Responsiveness: make changes due to environment
Short term: taxis, enzyme concentrations, transport
Long term: adaptation and evolution of species

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2
Q

What is natural selection?
How does natural selection lead to change in a species? (Hint: think about the antibiotic-resistance example)

A

some individuals will produce more offspring. Traits of those that reproduce more will predominate in future generation
Natural selection leads to adaptation & evolution of species
When apply antibiotics to a population you get chance to see which cells are resistant to antibiotics

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3
Q

Describe the cell theory

A

-the cell is the basic unit of like
-all living things are composed of one or more cells
-all cells come from other cells

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4
Q

Prokaryote Cells
o Size
o Nucleus? Organelles?
o Cell wall chemistry
o Ribosomes
o External structures
o DNA

A

Size: smaller
No Nucleus & organelles
Cell Wall: provide structure & shape protect from osmotic forces
Bacterial cell wall: composed of peptidoglycan- long strings
of alternating N- acetylglucosamine
(NAG) & N-acetylmuramic(NAM)
Ribosome: 70S
External Structures:

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5
Q

Eukaryote cells
o Size
o Nucleus? Organelles?
o Cell wall chemistry
o Ribosomes
o External structures
o DNA

A

Size: bigger than prokaryotes
Nucleus & organelles: yes
Ribosomes: 80S
External structures:

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6
Q

Eukaryote flagellum
o Structure (basal body-hook-filament vs. 9+2 or 9+0 arrangements)
o Function – how does the flagellum move? How does the organism move?

A

Basal body & filament, no hook b/c don’t rotate
Basal body: 9+0 (none in center) arrangement in 3s
Filament: 9+2 (2 in middle) arrangement in pairs
Function: Moves in undulation (waving) no run and tumble

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7
Q

Prokaryote flagellum
o Structure (basal body-hook-filament vs. 9+2 or 9+0 arrangements)
o Function – how does the flagellum move? How does the organism move?

A

Basal body: extend into the cell through cell membrane
through cell wall. Operates like motor
Hook: ridged hook creates bend in flagellum & filament- spins
around & around drives cell a lot better
Filament: majority of the structure
Function: “run & tumble”
Run- move straight line flagellum (CCW)- tufts of
flagella bundle & rotate together
Tumble- abrupt movement of flagellum (CW)- tufts
of flagella become unbundled

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8
Q

What do these words mean?
Monotrichous, lophotrichous, amphitrichous (these are all polar)

A

Monotrichous: one flagellum (@ one end of cell)
Lophotrichous: tuft/multiple flagella together (@one end of
cell)
Amphitrichous: one or more flagellum @ both end of the cell

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9
Q

What do these words mean?
o Peritrichous

A

cover the cell

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10
Q

What do these words mean?
o Taxis, chemotaxis, phototaxis, geotaxis, magnetotaxis

Define: Positive taxis & Negative taxis

A

Taxis: movement in response to stimulus (dif. external
environment stimulus)
-Postive taxis: movement toward stimulus ↑ # of Runs
(CCW)
-Negative taxis: movement away stimulus ↑ # of tumbles
(CW)
Chemotaxis: chemicals
Phototaxis: light
Geotaxis: gravity
Magnetotaxis: magnetic field

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11
Q

Phospholipid bilayer cell membranes:
o Describe the structure of a biological membrane.
o What can cross?
o What cannot cross?

A

-proteins up to 50%
-Fluid mosaic model: uneven distribution of proteins ( adding
& removing Proteins & phospholipids)
Functions:
1) barrier: separates inside of the cell from the outside
-semi-permeable –> not everything can cross the
bilayer
2) Respiration: location for the conversion of chemical energy
to cellular energy in some prokaryotes
-in order for respiration in membrane need to
have ETC: protons move electrons between one another
- e- get passed on to proteins in the membrane & some
proteins move a proton( hydrogen ion) across
membrane lots of changes on one side of membrane
What CAN cross: (all small & ionic, not too strongly charged)
-water
- small lipid soluble compounds (steroids)
- oxygen & CO2
What CANNOT cross:
-most hydrophilic substances
-charged compounds & ions
-ions

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12
Q

Phospholipid bilayer cell membranes:
 Diffusion, facilitated diffusion, osmosis, active transport

A

Passive Transports: doesn’t require energy, just use
concentration (DFO)
Diffusion: no energy occurs across membrane from high–>low
concentration
Facilitated Diffusion: requires protein
Carrier (permease): specific to chemical
Pore(channel): general, multiple chemicals can cross the
membrane
Osmosis: diffusion of water across membrane w/ or w/o a
pore
Active Transport: use cell energy=ATP to move material from
low to high concentration(ATP broken down
to ADP + phosphate
-Uniport: just 1 molecule move across membrane
-Antiport: 1 molecule in 1 direction other
molecule in other direction against ea. other
-Symport: moves both molecules in same direction
-Coupled transport: 2 transport working together to achieve
active transport (ex: uniport & symport)

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13
Q

What is group translocation? Who does it?

A

Only occurs in bacteria- chemical is altered as it crosses the membrane (EX: E. coli & glucose)

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14
Q

Describe the Bacterial structures (describe structure and function)
o Glycocalyx

A

EXTERNAL STRUCTURE
sugar cup
function: to protect cell/allow for attachment
composed of: polysaccharides, proteins or both
2 types of glycocalyces:
1) Capsule- firmly attached to cell surface in some
pathogens protects from immune cells
2) Slime layer- loosely attached- hold more H2O used
to attach to surface & protect against
dehydration

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15
Q

Describe the Bacterial structures (describe structure and function)
o Flagellum

A

EXTERNAL STRUCTURE
Motility: ability to move through the environment

Basal body: extend into the cell through cell membrane
through cell wall. Operates like motor
Hook: ridged hook creates bend in flagellum & filament- spins
around & around drives cell a lot better
Filament: majority of the structure
Function: “run & tumble”
Run- move straight line flagellum (CCW)- tufts of
flagella bundle & rotate together
Tumble- abrupt movement of flagellum (CW)- tufts
of flagella become unbundled

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16
Q

Describe the Bacterial structures (describe structure and function)
o Fimbria

A

EXTERNAL STRUCTURE
-nonmotile structures used for attachment
-short, numerous bristle-like surface projections, made of
protein
-stick cells to one another or to a surface( biofilms) or to a host
cell(pathogen)

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17
Q

Describe the Bacterial structures (describe structure and function)
o Pilus

A

EXTERNAL STRUCTURE
- longer than fimbriae( shorter than flagella)
-hollow tube: allow DNA to be transferred donor to receptor
- “sex pilus” (conjugation pilus): DNA transfer from one cell to
another

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18
Q

Describe the Bacterial structures (describe structure and function)
o Cell wall

A

EXTERNAL STRUCTURE
Gram +: Thick- many layers of peptidoglycan
-Teichoic acids: help ions pass through wall
-Lipoteichoic acids: link cell wall to cell membrane
-Some can be acid-fast bacteria (mycobacterium)
-additional layer of mycolic acid: hydrophobic waxy
material, prevents staining with crystal violet
Gram - : Thin cell wall of peptidoglycan
-extra membrane –> outer membrane
-From inside—> out: cell membrane->thin cell wall->outer
membrane (periplasmic space-periplasm-)
-Outer membrane: phospholipids, channel proteins,
LPS: lipopolysaccharide (lipid A+ polysaccharide)
-lipid A: also an endotoxin- when gram - bacteria are killed
endotoxin is releases into body which cause fever,
vasodilation, shock, blood clotting
-antibiotics: w/gram- infection want to stop
infection but antibiotic complicated

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19
Q

Describe the Bacterial structures (describe structure and function)
o Cytoplasm

A

INTERNAL STRUCTURE
- the liquid & structures inside the plasma membrane
Cytosol: the liquid portion of cytoplasm contains:
water, ions, carbs, proteins, lipids, waste

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20
Q

Describe the Bacterial structures (describe structure and function)
o Nucleoid

A

INTERNAL STRUCTURE (cytoplasm)
Contains DNA + proteins usually forms on single circular chromosome

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21
Q

Describe the Bacterial structures (describe structure and function)
o Inclusions

A

INTERNAL STRUCTURE
Storage deposits; varies with species
-contains : starches, lipids, sulfur (energy storage for
metabolism of cell), magnetic (allow organism to
figure out magnetic field & figure where to move),
gases, bouncy allow to float
-Polyhyroxybutyrate: PHB= lipid material used to make
biodegraded plastic

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22
Q

Describe the Bacterial structures (describe structure and function)
o Ribosomes

A

INTERNAL STRUCTURE (cytoplasm)
Site of protein synthesis
-Location throughout cytoplasm
-Size:70S s=sedimentation (how dense)
-Structure: 2 subunits (large & small: made of protein +
ribosomal RNA rRNA -rRNA backbone to subunit-)

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23
Q

Describe the Bacterial structures (describe structure and function)
o Cytoskeleton

A

INTERNAL STRUCTURE
-simple network of fibers beneath cell membrane- provide shape to cell
-not all bacteria have this structure

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24
Q

Describe the Bacterial structures (describe structure and function)
o Endospores

A

INTERNAL STRUCTURE
-made during period of starvation
-extremely resistant to: desiccation ,heat ,radiation, chemicals
-can survive for decades
-once food is available, they “wake up” or germination
-Bacillus & Clostridium
-Start as vegetative cells then starve and endospores then when nutrient available germinate and back to vegetative cells

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25
Q

Describe the Bacterial structures (describe structure and function)
o DNA

A

nucleoid

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26
Q

Describe the Bacterial structures (describe structure and function)
o thylakoids

A

INTERNAL STRUCTURE
membrane sac w/ ETC required to make chemical energy from light
-only bacteria that use sunlight as energy source ex: spirulina
-infolding the cell membrane = more SA of ETC

27
Q

Compare/contrast a Gram-negative bacterium and a Gram-positive bacterium
Be able to draw what these look like (membrane, cell wall, periplasm, teichoic acids, LPS, etc.)

A
28
Q

Describe the process of binary fission. Who does this? Why?

A

all reproduce asexually–> no true sexual reproduction
asexual reproduction occurs in most prokaryotes by binary fission(split in two)–> cytokinesis

29
Q

Describe the process of endospore formation. Who does this? Why?
o Why do we care if endospores exist?

A

1) DNA is replicated –>vegetative cell
2) Cytoplasmic membrane invaginates to form forespore
3) Cytoplasmic membrane grows & engulfs forespore within a
second membrane vegetative cell denigrates
4) a cortex of peptidoglycan is deposited between the
membranes ,meanwhile dipicolinic acid & calcium ions
accumulate within the endospore
5) spore coat forms around endospore
6) endospore matures. Completion of spore coat ↑ in
resistance to heat & chemicals by unknown processes
7) endospore is released from original cell
Allows the bacterium to produce a dormant and highly resistant cell to preserve the cell’s genetic material in times of extreme stress. Survive for decades

30
Q

Know the meaning of these words:
coccus, bacillus, spirillum, spirochete, vibrio, pleomorphic
tetrads, sarcinae, palisade, “V shaped”

A

Coccus: spherical
Bacillus: rod-like
Spirillum: spiral stiff
Spirochete: spiral flexible
Vibrio: curved (moon like)
Pleomorphic: varies in shape & size
Tetrads: four (cocci)
Sarcinae: eight-cube (cocci)
Palisade: side by side (bacilli)
V shaped: (bacilli)

31
Q

Know what these prefixes mean:
diplo-, strepto-, staphylo-

A

Diplo- : pairs (2) (bacilli & cocci)
Strepto- : a chain (bacilli & cocci)
Staphylo- : a bunch (cocci)

32
Q

Describe the Archaeal structures (describe structure and what they are for)
o Glycocalyx

A

EXTERNAL STRUCTURE
similar to bacteria; functions in biofilm formation
Capsule & slime layer

33
Q

Describe the Archaeal structures (describe structure and what they are for)
o Flagellum

A

EXTERNAL STRUCTURE
-Hook, basal body, filament- built dif. proteins & assembles dif.
-Built dif. smaller, slower than bacteria
-Dif. power source= ATP ( H+ in bacteria)

34
Q

Describe the Archaeal structures (describe structure and what they are for)
o Fimbriae & Pili

A

EXTERNAL STRUCTURE
Used for attachment

35
Q

Describe the Archaeal structures (describe structure and what they are for)
o Hami

A

EXTERNAL STRUCTURE
attachment structure unique to archaeal cells
1) grappling hook
2) Prickles: helps attach to cells to surfaces

36
Q

Describe the Archaeal structures (describe structure and what they are for)
o Cell wall

A

-Most have cell wall but NOT made of peptidoglycan
-Composed pf polysaccharides or proteins (or both)
-structure varies-

37
Q

Describe the Archaeal structures (describe structure and what they are for)
o Cell membrane

A

-functionally similar to bacteria , sometimes one layer (not
bilayer)
-Use dif. phospholipids than other organisms
-fatty acids can be branched
- either covalent bond between fatty acid & glycerol (not
ester linkage)

38
Q

Describe the Archaeal structures (describe structure and what they are for)
o Cytoplasm

A

INTERNAL STRUCTURE
liquids & structures inside the plasma membrane
-cytosol: dissolved minerals, gases
-histones- beads & string (like eukaryotes)

39
Q

Describe the Archaeal structures (describe structure and what they are for)
o Cytoskeleton

A

INTERNAL STRUCTURE (cytoplasm)
yes

40
Q

Describe the Archaeal structures (describe structure and what they are for)
o Nucleoid

A

INTERNAL STRUCTURE (cytoplasm)
DNA
-one circular chromosome (like bacteria) with structure similar to eukaryotes
-histones (proteins)/ nucleosome=beads on string/ proteins
that DNA winds around

41
Q

Describe the Archaeal structures (describe structure and what they are for)
o Ribosomes

A

INTERNAL STRUCTURE (cytoplasm)
Same size as bacteria (70S)

42
Q

Describe the Archaeal structures (describe structure and what they are for)
o DNA

A

nucleoid histones

43
Q

Compare and contrast Archaea and Bacterial cells (what’s the same? What’s different?)

A

SAME: glycocalyces, flagella, fimbriae, pili
DIFFERENT: -Hami,
-cell wall not made of peptidoglycan
(polysaccharides & proteins instead)
-cell membrane sometimes 1 layer,
-use dif. phospholipids & covalent bonds between
-fatty acid & glycerol (not ester linkage)
-ribosome same size dif. bacteria
-nucleoid histones (proteins)

44
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Glycocalyx

A

EXTERNAL STRUCTURE
-not as organized as prokaryotes
-only found in cells w/o cells walls(animals)
-anchored to cell membrane by covalent bonds to membrane
proteins & lipids
PROVIDES
-protection against dehydration(holds H2O)
-attachment
-reinforcement of cell membrane
-communication (traps chemical signals)

45
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Cell wall

A

plants, algae, fungi cells have walls (not animals)
FUNCTIONS:
-protection from environment
-shape the cell
-support against osmotic pressure
Composed of: various polysaccharides–> not peptidoglycan
-plants=cellulose
- fungi= chitin
-algae= various –> cellulose, agar, carrageenan

46
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Cell membrane

A

-semi-permeable phospholipid bilayer; fluid mosaic model
-contains STERIOD LIPIDS (animals=cholesterol) to help keep membrane fluids
-passage of materials: diffusion, facilitated diffusion, osmosis,
and active transport
-no group translocation
- Vesicular transport: moving materials in & out around
the cells w/ vesicles (spheres of membranes
- endocytosis (in) & exocytosis (out)
(not a lot of eukaryotes can do this )

47
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Flagellum

A

INTERNAL STRUCTURES (organelles; nonmembranous)
-moves by undulation (waving motion), no run & tumble
-basal body & filament no hook b/c no rotation
STRUCTURE:
-tubulin forms hollow tubes–> microtubules
-basal body: 9+0 (arrangement in triplets & none in center)
-filament: 9+2 (arrangement in pairs & 2 in center)

48
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Cilia

A

INTERNAL STRUCTURES (organelles; nonmembranous)
-cover the surface of the cell
-same structure as flagellum but short & numerous
-used in unison to move the organism forward

49
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Ribosome

A

INTERNAL STRUCTURES (organelles; nonmembranous)
-Site of protein synthesis
-LOCATION: cytoplasm, rough endoplasmic reticulum
-SIZE: 80S
-STRUCTURE: 2 subunits (large & small)
made of proteins & rRNA

50
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Cytoskeleton

A

INTERNAL STRUCTURES (organelles; nonmembranous)
-extensive network of internal fibers
-anchors or moves organelles, membrane changes for
vesicular transport, amoeboid movement, maintains cell
shape
-made of 3 types pf filaments
1) Microtubule (largest)
-tubulin
2) Microfilament (smallest)
-actin
3) Intermediate filament
- protein

51
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Centrosome & centriole

A

INTERNAL STRUCTURES (organelles; nonmembranous)
CENTROSOME: functions during cell division (mitosis &
cytokinesis) of many eukaryotes (not in
fungi/plants)
-one centrosome = 2 centrioles @ right angles to ea.
other, near the nucleus
CENTRIOLE: made up of microtubules “9+0” arrangement of
triplets

52
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Nucleus

A

INTERNAL STRUCTURE (organelles; membranous)
-nucleoplasm: liquid portion of nucleus
-contains one or more nucleoli (sing: nucleous->make
ribosome subunits)
-Chromatin: DNA + histones protein
-DNA wound around histones proteins from nucleosome
-Nuclear envelope:
-made up of 2 membranes that fuse together at locations
called nuclear pores

53
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Nucleolus

A

INTERNAL STRUCTURE (organelles; membranous)
-In nucleus makes ribosome subunits

54
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Endoplasmic reticulum (smooth and rough)

A

INTERNAL STRUCTURE (organelles; membranous)
ER: network of membranous tubes; continuous w/ the outer membrane of the nuclear envelope
- rough ER: protein synthesis occurs here b/c there are
attached ribosome
-smooth ER: No ribosomes, site of lipid synthesis
- lipids & proteins made in the ER are transported to other
parts of the cell by vesicular transport

55
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Golgi body

A

INTERNAL STRUCTURE (organelles; membranous)
-series of flat membranous sacs
-“post office of the cell”
-receives vesicles of stuff (proteins & lipids)
-packages (+ chemical groups)
-sends packaged stuff to other parts of the cell or out of the
cell
-vesicular transport: moving material around the cell using
membranous vesicle

56
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Lysosome

A

INTERNAL STRUCTURE (organelles; membranous)
VESICLE ORGANELLES
-in animal cell (“recycle bins”)
- contain enzymes that break down cell parts
-destroy an invading prokaryotes
- open into the cytoplasm for “suicide” (apoptosis)

57
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Peroxisome

A

INTERNAL STRUCTURE (organelles; membranous)
VESICLE ORGANELLES
-specific type of lysozome (“toxin neutralizer”)
-enzymes destroy poisonous metabolic waste (hydrogen
peroxide free radicals)

58
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Vacuole

A

INTERNAL STRUCTURE (organelles; membranous)
VESICLE ORGANELLES
-plants & algae store starch, lipids, water, etc.
-usually the largest part of a cell

59
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Mitochondria

A

INTERNAL STRUCTURE (organelles; membranous)
Site of cellular respiration
-found in respiratory eukaryotes (animals & cells that are
photosynthetic
-two phospholipid bi layer membranes
1) inner membrane: has many fluids(cristae)- create more SA
-Cristae contain ETC to convert chemical energy to
ATP(respiration)
2) outer membrane: fairly permeable important for getting
ATP made in mitochondria-> have their own DNA &
ribosomes (70S); make few proteins the rest are coded by
the cell’s DNA

60
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o Chloroplasts

A

INTERNAL STRUCTURE (organelles; membranous)
-harvest light for photosynthesis
-Two phospholipid bilayer membranes (outer & inner)
- found in photosynthetic eukaryotes (algae, green plants)
-contains thylakoids: membranous sacs which contain the
pigments & ETC to convert light to ATP (photosynthesis)
- outer membrane -> inner membrane -> stroma: synthesis
part occurs, used to move sugars -> Granum: all inter-
connected (each individual is a thylakoid)
-light rxns are in granum & thylakoids

61
Q

Describe these Eukaryotic structures (describe structure and what they are for)
o DNA

A

nuclei

62
Q

What is vesicular transport?

A

moving materials in & out around the cells w/ vesicles (spheres of membranes
- endocytosis (in) & exocytosis (out)
(not a lot of eukaryotes can do this )

63
Q

Compare/contrast exocytosis and endocytosis.
What is phagocytosis? Pinocytosis?

A

ENDOCYTOSIS:
1)phagocytosis (“eating cell”): import solid materials into the
cell
2) Pinocytosis (“drinking cell”): liquid into cell

EXOCYTOSIS: eliminating wastes from cell using a vesicle to
fuse w/ cell membrane