Exam 2: Ch 7 Control of Gene Expression in Bacteria Flashcards

(30 cards)

1
Q

in cancer, genes that restrain cell growth are ________ repressed and genes that encode proteins that promote cell growth and replication are ________ activated

A

abnormally, inapropriately

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

regulation of gene expression can occur at various steps

A

transcription initiation and elongation

RNA processing

mRNA export from nucleus

translation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

control of gene expression at which two steps are most important for determining whether most genes are expressed and how much protein is produced?

A

transcription initiation and elongation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what is pax6

A

transcription factor that regulates transcription of genes involved in eye development

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what do repressor and activator proteins do

A

recognize and bind to specific regions of DNA to control the transcription of a nearby gene

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

transcription control region

A

sequences of DNA that serve as binding sites for repressor and activator proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

the structure and function of a cell are determined by …

A

the proteins it contains

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

by controlling _____ a cell can regulate which proteins it produces, and how rapidly

A

transcription

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

when transcription of a gene is ______, the corresponding mRNA and encoded protein is synthesized at low rates. Opposite of this is…

A

repressed

activated

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

operons in E. coli

A

make up half the genes

encode enzymes involved in metabolic pathways or multiple proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what do the lac and trp operon encode?

A

lac: 3 proteins required for metabolism of lactose
trp: 5 pp needed for biosynthesis of tryptophan

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

coordinate regulation

A

all genes in an operon are activated or repressed to the same extent

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

transcription of operons and isolated genes is controlled by interplay between…

A

RNA polymerase and specific repressor and activator proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

to initiate transcription, E. coli RNA polymerase must be associated with…

A

a sigma factor

σ70 binds RNA polymerase and to promoter DNA sequences

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

σ70 is…

A

an initiation factor

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

synthesis of the lac operon is repressed when….

A

there is no lactose around: to conserve energy

when there is glucose around: preferential glucose metabolism

17
Q

transcription of lac operon under different conditions is controlled by…

A

lac repressor

catabolite activator protein (CAP)

both bind to a specific DNA sequence in the lac transcription control region called the operator and CAP site

18
Q

when no lactose is present where does the lac repressor bind

A

to the lac promoter, blocking σ70 from initiating transcription

19
Q

when glucose falls, E. coli synthesizes a lot of…

A

cyclic AMP that binds to CAP protein allowing it to bind to the CAP site, stimulating rate of transcription initiation

20
Q

what makes a strong/weak promoter

A

rate of transcription

21
Q

what regulates expression of many bacterial genes via DNA-binding repressors and activators

A

small molecules

cAMP, phosphorylation

22
Q

how many σ factors are there

23
Q

enhancer

A

binding sites in DNA located 80-160bp upstream from start site

24
Q

σ54

A

sigma factor found in E. coli

binds to RNA polymerase to start transcription initiation

25
NtrC protein
stimulates transcription of glnA gene that encodes enzyme glutamine synthetase binds to enhancer after being phosphorylated by NrtB
26
many bacterial responses are controlled by..
two-component regulatory systems like NtrC and NtrB
27
control of transcription elongation example
trp operon
28
trp operon is repressed by
trp repressor when concentration of trp in cytoplasm is high
29
when there is low concentration of tRNAtrp...
the ribosome stalls at the 2 Trp codons in region 1
30
riboswitch
RNA tertiary structures that bind small molecules when present at high concentration form hairpins that lead to early termination of transcription