Exam 3: Ch 13 Targeting of Proteins to Mitochondria, Chloroplasts, Peroxisome Flashcards

(40 cards)

1
Q

structure of mitochondria and chloroplasts

A

2 phospholipid bilayers

outer membrane, inner mebrane, intermembrane space, internal matrix (lumen)

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2
Q

structure of peroxisome

A

single membrane and single luminal matrix

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3
Q

proteins encoded by mitochondrial or chloroplast DNA are…

A

synthesized on ribosomes within the organelles and directed to the correct subcompartment immediately

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4
Q

the majority of proteins in mitochondria and chloroplasts are encoded by genes in the…

A

nucleus, and imported into the organelles after synthesis in cytosol by free ribosomes

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5
Q

do proteins targeted to the mitochondria, chloroplast, and peroxisome have a signal sequence?

A

yes, part of the mature protein

cleaved in mitochondria and chloroplast

not cleaved in peroxisome

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6
Q

in mitochondria and chloroplasts, protein import requires ____ and occurs where

A

energy

occurs at points where the outer and inner membranes are close together

may need 2 targeting sequences and 2 translocon systems

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7
Q

import to matrix requires

A

a matrix-targeting sequence

goes to outer mitochondrial memb. import receptor –> import pore (outer memb)

simultaneous transport occurs through TIM through the inner membrane into the matrix

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8
Q

are chaperonins found in the matrix?

A

yes, help final folding of matrix proteins

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9
Q

studies with ______ proteins show important features of mitochondrial import

A

chimeric

a precursor must be unfolded to enter import pores

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10
Q

_ energy inputs are needed to import proteins into mitochondria

A

3

ATP hydrolysis by chaperone proteins

molecular motor of chaperone + TIM

proton-motive force (H+ electrochemical gradient)

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11
Q

targeting of proteins to areas other than the matrix of the mitochondria require..

A

more than 1 signal sequence

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12
Q

targeting to inner membrane

A

3 pathways

1: same as targeting to matrix + stop-transfer sequence
2: insertion into inner membrane
3: incorporates multiple segments into inner membrane

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13
Q

targeting to intermembrane space

A

2 pathways

1: matrix targeting sequence + sequence that blocks translocation of protein across inner membrane
2: direct transport to intermembrane space without a matrix targeting sequence

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14
Q

targeting to outer-membrane

A

beta barrel structure

interact with general import pore

transfer to SAM

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15
Q

targeting of chloroplast _____ proteins is similar to import of mitochondrial matrix proteins

A

stromal

ex. enzymes of calvin cycle (rubisco)

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16
Q

stromal import sequence

A

similar to matrix import sequence

transport entirely ATP hydrolysis dependent

involves a receptor and import pore

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17
Q

thylakoid

A

series of interconnected membranous sacs

proteins in thylakoids carry out photosynthesis

18
Q

many proteins in thylakoids are synthesized in the…

A

cytosol as precursors with multiple targeting sequences

stromal import sequence, thylakoid lumen sequence

19
Q

_ pathways for transporting proteins from the stroma to the thylakoid have been identified

A

4

closely related to translocation across bacterial membrane

20
Q

4 pathays of thylakoid transport

A

1: involves an SRP with a translocon
2: ATP hydrolysis
3: related to Oxa1 protein
4: metal-containing cofactors, H+ electrochemical gradient

21
Q

as peroxisomes are enlarged by addition of protein and lipid, they eventually…

A

divide to form new ones

22
Q

peroxisomes use what types of enzymes

A

ones that use molecular oxygen to oxidize substates

generates hydrogen peroxide

abundant in liver cells

23
Q

what sequence targets proteins to the peroxisome (matrix)

A

SKL at the c terminus

peroxisomal targeting sequence 1 (PTS1)

24
Q

peroxisomal protein import mechanism

A

protein with PTS1 binds to soluble carrier protein in cytosol

carried and binds to receptor in peroxisome matrix

protein imported

carrier protein recycled

25
is a different set of proteins required to embed proteins into the peroxisomal membrane?
yes
26
nuclear envelope
two membranes that separate the nucleus from the cytoplasm continuous with ER membrane
27
nuclear pores
span both membranes of nuclear envelope allow transport of proteins and other molecules into and out of the nucleus made of nuclear pore complex made from nucleoporins
28
imported nuclear proteins have what sequence
nuclear localization sequence
29
do proteins enter the nucleus in a folded state?
yes
30
environment of the nuclear pore
aqueous pore
31
3 types of nuclearporins
structural: form scaffold membrane: highly curved region FG: line channel of NPC
32
what receptor is needed for nuclear transport
a nuclear transport receptor
33
two required cytosolic components for nuclear transport
Ran nuclear transport receptor
34
Ran
small monomeric G protein (GTP/GDP)
35
nuclear transport receptor
binds the NLS on a cargo protein and to FG nucleoporins in nucleoplasm, interacts with Ran-GTP which goes back to the cytoplasm then Ran turns GTP --> GDP and releases the nuclear transport receptor back into cytoplasm
36
what is exported from the nucleus to cytoplasm
proteins tRNA ribosomal subunits
37
nuclear export requires what signal
a nuclear export signal (NES)
38
what receptor is needed for nuclear export
exportin 1 interacts with Ran-GTP and NES
39
most mRNAs are exported from the nucleus by a ___-independent mechanism
Ran-independnt
40
mRNA export from nucleus
mRNA associated with an hnRNP forming an mRNP uses mRNP exporter that interacts with FG nucleoporins uses ATP hydrolysis driven by a concentration gradient