Lecture 1: introduction Flashcards

(39 cards)

1
Q

What is a virus?

A

a virus is a filterable, small obligate intracellular parasite that is inert outside of a host cell

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2
Q

what does propagation of viruses depend on

A

specialized host cells that supply the metabolic and biosynthetic machinery of eukaryotic or prokaryotic cells

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3
Q

T/F: viruses lack organelles

A

True. the only pseudo-exception to this is Arenavirus, which acquires ribosomes from the host cells. These ribosomes are not functional

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4
Q

If you wanted to observe a virus, which of the following strategies could you use?
a) electron microscopy
b)nanoscopy
c) light microscopy
d) naked eye

A

Electron microscopy and/or nanoscopy

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5
Q

What is the biggest virus, and what is the smallest?

A

pithovirus sibericum is the largest, at 1.5 micrometers.

Circovirus is the smallest at 17 nm

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6
Q

what was the pasteur-chamberland filter?

A

A filter created in 1890 that allowed for bacteria and other cells to be removed from a lliquid. It worked by having pores of 100-1000 nm for filtering purposes

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7
Q

What are the three structural components of a virus?

A
  1. the genome
  2. capsid coat made 100% of protein
  3. +/- an envelope consisting of a lipid bilayer
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8
Q

Describe viral envelop formation

A

modified host cell membranes surrounds the capsid.

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9
Q

what is the viral envelop made of

A

lipid bilayer that is studded with virus-coded glycosylated membrane proteins

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10
Q

what do budding viruses carry?

A

certain host cell proteins that form integral constituents of the viral envelope

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11
Q

what is a bacteriophage?

A

a virus that infects bacteria. It consists of a head made from protein and DNA, and a tail of solely protein

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12
Q

What virus is commonly used as a vector to deliver antigens?

A

poxvirus

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13
Q

what is the largest animal virus?

A

poxviruses

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14
Q

70% of all viruses are ___ viruses

A

RNA

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15
Q

What are the two types of viral genomes?

A

Single-coil and fragmented

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16
Q

what is the implication of having a segmented genome in a virus?

A

mispackaging and subtypes from replication of the fragments

17
Q

Give an example of a virus with a single-coil genome

A

Respiratory syncytial virus

18
Q

give an example of a virus with a fragmented genome

19
Q

Go review the central dogma if you’ve forgotten it

20
Q

what was the first classification system for viruses

A

Linnaean hierarchical system

21
Q

What did the international committee on taxonomy of viruses (ICTV) deem was wrong with using the Linnaean system for viruses?

A

Viruses have small genomes and a high mutation rate, making it difficult to classify them beyond order. Because of this, viruses should not be classified on phylum or class

22
Q

how many orders of viruses have been established by the ICTV

23
Q

Of the 7 orders of viruses described by the ICTV, which are the 3 that you should know?

A

Caudovirales-tailed dsDNA bacteriophages

Ligamenvirales-linear, dsDNA archaean viruses

Tymovirales-monopartite (+) ssRNA viruses that infect plants

24
Q

What does the Baltimore classification base its classification system on

A

the mechanism of mRNA production

25
Name the seven groups of viruses in Baltimore classification
1. dsDNA 2. ssDNA 3. dsRNA 4. (+) ssRNA 5. (-)ssRNA 6. ssRNA-RT 7. dsDNA-RT
26
Pathogenesis of mRNA synthesis in dsDNA viruses (excepting pox)
dsDNA -> cellular RNA polymerase 2 -> mRNA (+)
27
what is the only dsDNA virus that uses virion transcriptase as opposed to cellular RNA poly 2?
asfa, irido, and (most importantly) pox
28
describe the pathway of mRNA synthesis for pox viruses
Pox dsDNA -> virion transcriptase -> mRNA (+)
29
describe the pathway of mRNA synthesis in ssDNA
ssDNA->cellular DNA polymerase -> dsDNA -> cellular RNA polymerase 2 -> mRNA (+)
30
what are some examples of dsDNA viruses
Adeno Hepadna Herpes Papilloma polyoma Asfa Irido Pox
31
what are some examples of ssDNA
Anello Circo parvo
32
describe the pathway of primary mRNA synthesis by ssRNA (+) (excepting retroviruses)
the ssRNA (+) acts as the mRNA (+), and doesn't have to undergo any transformation
33
describe the pathway of mRNA synthesis by retroviruses (ssRNA (+))
retro -> virion reverse transcriptase -> ssDNA -> integrates with host genome -> cellular poly 2 -> mRNA (+)
34
describe the pathway of mRNA synthesis by dsRNA
dsRNA -> virion RdRp -> mRNA (+)
35
describe the pathway of mRNA by ssRNA (-) (excepting delta)
ssRNA (-) ->virion RdRp ->mRNA (+)
36
pathway of mRNA by deltaviruses
Delta ->cellular RNA poly 2 -> mRNA (+)
37
what are some examples of ssRNA (+)
picona Flavi calici astro corona retro
38
what are some examples of dsRNA viruses
reo birna
39
What are some examples of ssRNA (-) viruses
rabdo filo borna paramyxo orthomyxo bunya delta