Lecture 15: How Cells Become Different Flashcards

Understand that gene expression can be regulated at many different levels • Understand the concept of promoter • Understand that transcriptional regulators are DNA binding proteins that can act as activators or repressors • Understand how the Lac operon is regulated in bacteria • Appreciate the complexity of eukaryotic transcriptional regulation • Understand the definition of enhancers and their roles in transcriptional regulation

1
Q

gastrulation in a nutshell

A

zygote -> cleavage (morula) -> blastula -> gastrula

intially totipotent -> later become less potent, more specified

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2
Q

how do cells become different

A

step-wise restriction of “cell fate potential”
-cell intrinsic (cell autonomous) - making cells different, asymmetric cell divsion
-cell extrinsic (non-cell autonomous) - cell-cell communuication w/ outside env. (signals)

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3
Q

what makes cells different

A

differential gene expression

terminally differentiated: potential is reached, cannot become anything else

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4
Q

cell fate

A

describes what cells will normally develop into

differentiated cell:
cell thst has become specialized (e.g. liver)
usually refers to terminal state of a cell but can also refer to intermediate states (mesoderm, endoderm, etc.)

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5
Q

commitment

A

cells may have become committed to a particular fate even though they may not look differentiated

the process of commitment can be divided into two phases:
specification: commitment to a particular fate, but in a lanile or reversible manner
determination: irreversible commitment to a particular fate

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6
Q

test of specification (isolation experiment)

A

put the cell or tissue in isolation in a neutral environment (e.g. tissue culture) what does the cell become?

  1. if it expresses a different fate than it would normally, it was NOT specified and NOT determined
  2. if it expresses its normal fate, it is specified but may or may not be determined.

must do peturbation to know if differentiated

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7
Q

in vitro (in a dish) test for determination

A

put the cell or tissue in a new environment. what does the cell become?

  1. if it still expresses its normal fate, then it is determined
  2. if not, then it is not determined
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8
Q

in vivo test for determination

A

cells are DETERMINED if transplantation from their normal position to a new position in the embryo does not change their normal fate

ask tutor for help

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9
Q

commitment to a particular fate is progressive

A

each step is irreversible -> cells have memory
cell fate becomes increasingly restricted during development

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10
Q

is the genome changing during development?

test: nuclear transplantation

A
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11
Q

first animal cloning experiment

A

Gurdon (!962) showed that the nucleus from fully differentiated tadpole skin cell can direct normal frog development

clone frogs look like donor frogs
nucleus contains all info needed to develop

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12
Q

differential gene expression theory

A
  1. the genome is contant in all somatic cells
  2. only a small proprotion of the gneome in any cell type is expressed
  3. different cell types express different groups of genes that confer unique cellular characteristics
  4. unused genes that are not transcribed are not mutated or destroyed; they retain potential to be expressed (skin cells can be reactivated/reprogrammed)
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13
Q

differential gene expression makes cells different

A

ask tutor to explain

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14
Q

cell autonomous (ASYMMETRIC cell divsion)

A

cell intrinsic mechanism
sister cells are born different
asymmetric cell divsion

1 cell -> 2 different cells

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15
Q

non-cell autonomous

A

cell extrinsic mechanism
involves “cell signaling”
sister cells become different as a result of influences acting on them after their birth

inductive signaling; lateral inhibition

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16
Q

cell signaling is …

A

a major cell EXTRINSIC mechanism of cell diversification and organismal development

17
Q

extracellular signaling molecule examples

A

proteins, peptides, amino acids, nucleotides, steroids, fatty acid derivatives, gases

signaling molecule could be: part of the extracellular space, attached to another cell, flowing through the circulatory system

18
Q

cell signaling diagram

A

intracellular: relay, amplify, integrate, distribute

effector may alter: gene expression, metabolism, cytoskeleton

response: cell division, growth, survival, migration, secretion, contraction, differentiation

ask tutor

19
Q

inductive signaling

A

some inductive signals function in an all-or-none manner

some inductive signals function in a concentration-dependent manner- morphogens

20
Q

signaling molecules can function as morphogens (what are they?)

A

a morphogen is…
a diffusable molecule secreted from a source (Signaling cell or cells)

forms a graded distribution (concnetration gradient: higher near the ource and lower farther away)

produces specific cellular responses depending on its local concentration

provides a mechanism to specify fates in a reproducible pattern

21
Q

example of a morphogen gradient

A

inappropriate expression of Shh or Shh signaling causes extra digit form

ask tutor

22
Q

lateral inhibition

A

cells born as equivalent cells can adopt different fates in the absence of tissue asymmetries ( due to cell-cell communication)

both cells produce the same amount of X, and inhibit the production of X in their neighbor equally

a transient increase in X produced by cell 1 causes a stronger inhibition of X production by cell 2

a decrease in X produced by cell 2, allows cell 1 to make more X

23
Q

how does lateral inhibtion work?

A

group of equivalent cells, cells compete by inhibiting neighbors, some cells predominate

lateral inhibtion works between two neighboring cells that are directly adjacent to each other

24
Q

in sum - how do cels become different?

A
25
Q

cell-cell communication in animal development is mediated by only a small number of conserved cell-cell signaling pathways, including

A

transforming growth factor-B (TGFB)
Wnt
Hedgehog (Hh)
Notch
Receptor tyrosine kinase (RTKs)

yet, there is enormous cell diversity in animals

26
Q

the same inductive signal can…

A

generate different responses

initally identical but receive diff. signals due to location

27
Q

sequential induction

A

initially 2 groups of cells that can generate a lot of cell diversity from signals