lecture 9 Flashcards

1
Q

what are the two steps that misfolded protein will trigger

A

stop any further protein synthesis
result in an expression of a particular set of proteins to help with the problem

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2
Q

what causes translation factor elF2a to bind to a small ribosomal subunit to inhibit function of translating protein

A

phosphorylation by PERK

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3
Q

what does pathway 2 in unfolded protein response do

A

ATF6 gets transported to Golgi and proteins will be transcribed to help with the overwhelming situation of misfolded proteins

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4
Q

where does the ER bud to create vesicles

A

RER where there are no ribosomes

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5
Q

whats the first step in vesicular transport

A

budding

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6
Q

what is the endoplasmic reticulum Golgi intermediate compartment

A

a compartment where all the vesicles can fuse and go to the Golgi together

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7
Q

whats the structure of Golgi complex

A

stack of flattened cisternae

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8
Q

what face of the golgi complex faces the ER

A

Cis Face

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9
Q

what side of the Golgi complex faces the opposite side of the stack

A

trans face

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10
Q

what modifies, stores, and secretes molecules that it receives from the ER

A

Golgi complex

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11
Q

what part of the Golgi is the protein sorting station

A

cis Golgi network

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12
Q

what part of the Golgi is the part that packages proteins into vesicles

A

trans Golgi network

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13
Q

whats the movement of protein through the golgi

A

cis to trans

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14
Q

what direction is the current model for vesicle transport ?

A

retrograde

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15
Q

what are the 2 functions of protein coating

A

causes membrane to curve and form budding vesicles
selects components to be carried by vesicle

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16
Q

what direction do COPII coated vesicles travel

17
Q

what direction do COPI coated protein travel

18
Q

where do clattering coated vesicles travel and what do they become

A

from the transgolgi network to becoming endosomes and lysosomes

19
Q

what induces curvature in the membrane (vesicle formation)

A

COPII proteins and Sar1

20
Q

what terminal signals where coated vesicles belong

A

C terminal

21
Q

what kind of protein is Sar 1

A

G protein (requires GTP)

22
Q

what do “sec” do

A

induce more curvature for vesicle formation

23
Q

what are the 2 layers of transport vesicles

A

outer scaffold of proteins
inner layer of adaptor proteins

24
Q

what is COPII created by? whats its lattice like?

A

sec13 and sec 31
no overlap of lattice

25
what is the structure of clatherin
3 legged clatherin that overlap extensively
26
which coated vesicle contains coatamer
COPI
27
what do rogue protein get transferred back to the ER in?
COPI coasted vesicles
28
what receptor on the Golgi apparatus recognizes specific rogue sequences and sends it back to the ER?
KDEL receptor
29
what sequence does a KDEL receptor recognize
KDEL in amino acid lysine aspartic acid glutamic acid leucine
30
what kind of protein does a KDEL receptor send back to ER?
ER resident proteins
31
what terminus contains sequences that are usually recognized on polypeptides
C terminus
32
what does transportation at the TGN occur in
clatherin coated vesicles
33
where are proteins tagged in the golgi network?
the cis Golgi
34
explain the process of lysosomal enzymes
they are synthesized in ER tagged with a mannose 6 phosphate tag in the cis Golgi and transported to the Transgolgi where they get made into a clatherin vesicles the vesicle gets bound by a mannose 6 phosphate receptor which knows the tagged enzymes need to be delivered to the lysosome once at lysosome, the mannose receptor gets recycled
35
what initiates membrane curvature for clatherin coated vesicles
Arf1-GTP (G protein)