metabolism Flashcards

1
Q

what is metabolism

A

process where organisms acquire and use free energy for different functions

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2
Q

what is a metabolite

A

small molecule intermediate used in degradation and synthesis of polymers

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3
Q

what is catabolism

A

degradative pathways ( exergonic oxidation)

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4
Q

what is anabolism

A

biosynthetic pathway ( engergonic proceses)

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5
Q

what compound supports ATP synthesis

A

NADH

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6
Q

what compound is used for anbolism

A

NADPH

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7
Q

is a metabolic pathway reversible or irreversible

A

irreversible overall but there are some steps that are reversible individually

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8
Q

what step is highly exergonic in metabolic pathway

A

the first step, regulated step, cannot go back

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9
Q

the remaining steps in a metabolic pathway are close to what

A

equilibrium

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10
Q

what steps in glycolysis are regualated and how do you know

A

steps 1,3,10 because the arrow is not reversible

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11
Q

what free energy does the regulated steps have in a metabolic pathway
ex. glycolysis

A

negative free energy

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12
Q

why cant irreversible pathways run at equilbrium

A

they have a negative free energy

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13
Q

if 2 pathways are irreversible what does it mean

A

the pathways are somewhat different

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14
Q

what does an independent route mean

A

independent control so you need to control the amounts of either 1 or 2 together

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15
Q

what is feedback inhibition

A

end product inhibits an enzyme further upstream in the pathway usually the first enzyme

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16
Q

is feedback inhibition negative of positive feedback

A

negative

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17
Q

what is product inhibition

A

product of an enzyme catalysis reaction binds to it inhibiting activity

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18
Q

what is feed forward activation

A

metabolite early in the pathway activates an enzyme further down the pathway

19
Q

where do almost all metabolic pathways feed in to

A

the central reaction og glycolysis

20
Q

cells can use the energy generated from oxidizing what

A

carbon with O2 to do owrk/make ATP

21
Q

what bonds do both fatty acids and glucose get energy from

A

C-C, C-H, C-OH

22
Q

what is the energy carrier for most biological reactions

23
Q

where is most of the energy in ATP stored

A

phosphoanhydride bonds

24
Q

why are phosphoanhydride bonds used in ATP hydrolysis

A
  1. relieves electrostatic repulsion
  2. Pi released by hydrolysis has better resonance stabilization
  3. greater degree of solvation of products
25
what is the free energy of ATP and H2O
-45.6
26
what is the free energy for ADP and H2O
-30.5
27
opposite rxns give what of the formation
opposite Delta Gs
28
what does a large delta g mean
energy rich compound, high energy phosphate bond high phosphate transfer potential it means that the reaction is spontaneous
29
what compounds do not spontaneously hydrolyze but contain large amounts of stored free energy
Pi (phosphoryl)
30
what does a small delta g of hydrolysis mean
- energy poor compound - low energy phosphate bond - low phosphate transfer potential
31
what is the relationship between a compound with large delta g and smaller delta g of hydrolysis
LARGE CAN TRANSFER TO SMALL
32
what is the amount considered for a energy rich compound
-25 kj/mol or more - ve
33
what is the delta g standzard for energy poor compounds
0 to -25kj/mol
34
what is substrate level phosphorylation
production of ATP (from ADP) by direct transfer of a high energy phosphate from a high energy Pi compound whose delta g hydrolysis is more negative than that of ATP
35
what can ATP be formed by and what compounds can it be formed from
SLP and from compounds like PEP and 1,3 BPG
36
what compound has a phosphate gp transfer potentinal and it has more -ve than ATP and it can also be used to make ATP
acyl phosphate
37
what is this structure
acyl phosphate
38
what is PEP
compound that can make ATP - has a huge delta G
39
why does PEP have a huge delta g hydrolysis
due to enol to keto tautomerization
40
why is creatine phosphate considered a high energy compound and what is it used for
- creates a high energy p-N bond - occurs in cardiac and skeletal muscle and brain
41
what is a high cenergy compound used in Acetyl CoA
thioesters
42
free energy changes are dependent on what
concentration
43
what compound has 2 high energy electrons
NADH
44
what are some isotopic tracers
glycine, glutamate, proline, leucine