Microbial genetics Flashcards

(75 cards)

1
Q

Resistance plasmids

A
  • have resistance genes related to antibiotics and heavy metals that would kill ordinary bacteria.
  • R genes
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2
Q

Resistance bacteria are ______ through ____

A

passed from bacterium to bacterium through conjugation

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3
Q

transfer of resistance plasmids occurs between

A

Occur between closely related genera

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4
Q

exaple of closely related genera

A

Escherichia Klebsiella Salmonella Serratia, Shigella and Yersinia

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5
Q

Vertical gene transfer

A

Gene transfer from mother to daughter cells

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6
Q

horizontal/lateral gene transfer

A

gene transfer between unrelated cells

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7
Q

Due to lateral gene transfer _____

A

organisms with similar genes may NOT have evolved from a common ancestor

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8
Q

Prokaryotic reproduction ______ requires _____

A

never requires gene exchange

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9
Q

Many euks reproduce ____ which requires ____

A

sexually, which requires meiosis and fusion of gametes

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10
Q

Prokaryotes reproduce ____ by _____

A

asexually by binary fission or budding

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11
Q

what makes a small amount of transferred DNA propagated?

A

if it integrates into a chrom or plasmid, or if it is a plasmid itself

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12
Q

propagated

A

replicated and handed down to progeny cells

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13
Q

euks are diploid or haploid

A

diploid

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14
Q

proks are diploid or haploid

A

haploid

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15
Q

because proks are haploid, what genes are expressed

A

recessive alleles or mutations are expressed in proks

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16
Q

genetic exchange among euks is done by

A

gamete fusion

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17
Q

Proks have 3 different mechanisms for gene exchange:

A

transformation
transduction
conjugation

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18
Q

Transformation

A

gene transfer by taking up soluble DNA from the environment

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19
Q

Conjugation, and what does it include?

A

Gene transfer that requires cell-cell contact
includes R plasmid, F plasmid, Hfr transfer

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20
Q

Transduction

A
  • gene transfer by means of bacteriophages
  • can be generalized or specialized
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21
Q

Griffith’s experiment, and the conclusion he found

A
  • an experiment with pneumococcal infections in mice
  • something from the dead S cells had “transformed” the R cells, making them smooth and virulent
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22
Q

Transformation requires _____ cells, which ______

A

Competent cells which can take up DNA from the environment

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23
Q

_______ transformations is ______

A

natural transformations is rare

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24
Q

natural transformations is observed in

A

S.Pneumoniae, B.Subtillis and H.influenzae

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25
Artificial transformation
chemically competent cells
26
what are the 2 possible fates of linear DNA after entry in bacterial cell
- it can degrade in the cell cytoplasm - it can undergo homologous recombination and becomes part of the chromosome
27
RECA
if homologous sequence is present, RECA catalyzes it and lets recombination occur
28
how does the Linear DNA go into chromosome
Through the use of nucleases
29
plasmid DNA can exist ___
on its own as long as it has its own origin of replication
30
generalized transduction
any of the host bacterium's genes can be transferred
31
specialized transduction
only certain genes can be transferred
32
virulent phages
always replicate using the lytic cycle
33
temperate phages
can replicate using the lytic or the lysogenic cycle
34
lambda phages
can do lytic or lysogenic
35
all viruses can do ___ only some can do ____
lytic, lysogenic
36
Linear DNA must be _____
recombinated
37
only ____ cells can take in DNA, which is _____
confluent, random
38
an error in the assembly stage of phage replication causes
generalized transduction
39
an error in the prophage excision stage in the chromosome of phage replication causes
specialized transduction
40
lysogenic cycle exists
indefinetly (forever)
41
If specialized transduction occurs, _______ are always excised
same genes
42
gene exchange happens because of ______
mistakes done by bacterophages
43
Lederberg and Tatum discovered _____
conjugation
44
how was conjugation discovered?
Through mixing 2 different auxotrophs and recovered prototrophs
45
conjugation
requires cell-cell contact facilitated by sex pilli. Occurs in gram (-) bacteria
46
What gene does conjugation need
"tra" genes (transfer genes), this includes genes encoding proteins in sex pili
47
in gram (+) the mechanism for conjugation is ____
unknown
48
common types conjugation
F plasmic Hfr F' plasmid R plasmid Virulence plasmids
49
rolling circle replication
A single strand of the F plasmid enters the F-cell
50
OriT
marks the region on F plasmid that enters the recipient cell first - origin transfer
51
T/F A Hfr cell has the F plasmid integrated into the chrome
T
52
Hfr conjugation
Is genetically identical to F+ cell except its plasmid is not separate from the chromosome
53
the amount of DNA transferred in Hfr conjugation depends on ___
the amount of time the conj lasts
54
F+ cell and Hfr cell ....
can turn into or reverse back to each other
55
F' conjugation is
Begins with Hfr cell, F plasmid excides itself, but it doesn't do it percicley and takes some chromosomal genes with it, it is a mistake. - this makes it F'
56
F' plasmid
carries some chromosomal genes
57
genes on F' plasmif are transferred to reci[ient F-cell during ____
conjugation
58
R-plasmids
responsible for the transfer of antibiotic resistance genes - transferred like F-plasmids
59
What requires homologous recombination for the transferred genes to be inherited by progeny
Transformation, Hfr conj, generalized transduction
60
Mutation
any change in a cells DNA seq
61
small change in DNA
point mutations
62
Large change in DNA
deletions, insertions
63
mutations can be described by their ______
phenotypes
64
auxotrophic
defect in biosynthesis pathway so the mutant cell requires exogenous building blocks for growth
65
temperature sensitive
mutation that causes loss of a particular function at high or low temp
66
reversion (back mutation)
changes a mutated seq back to the original WT seq
67
Mutations can be induced by _____
mutagens
68
Transposon
mobile genetic seq that has genes for transposition - often has R genes - present in prok and euk
69
what can transpons do to DNA? what does this lead to?
they can randomly insert themselves into DNA, causing mutations and conferring antibiotic resistance
70
transposon mutagenesis
used to generate mutants for genetic studies
71
advantages of transposon mutagenesis
- mutations are marked by tn and antibiotic resist gene, the location of the must can be identified rapidly
72
disadvantaged of transposon mutagenesis
they only make insertion mutations, so mutations in essential genes may not be recovered
73
why would scientists do a genetic screen?
to discover genes involved in a process you're interested in
74
how to do genetic screen
1) determine pheno of mut 2)mutinogize 3) let mut grow in permissive conditions 4) replica grow in restrictive conditions, this identifies mut with wanted pehno
75
CRISPR-cas
protects prok from repeat viral infections