Module 1 Flashcards

(39 cards)

1
Q

Biochemistry is

A

Study of life at molecular level
Application of the principles of Chemistry to explain biology
Common sets of reactions and principles that underlie all living organisms
Study of molecular logic of life

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2
Q

All organisms use

A

Building Blocks to create common categories of biomolecules

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3
Q

Foundations of life

A

Chemical
Energy
Genetic
Evolutionary

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4
Q

Chemical Foundations

A

Carbon
Oxygen
Hydrogen
nitrogen

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5
Q

All life forms are composed of

A

Carbon

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6
Q

What is the limiting regnant of the biosphere

A

Nitrogen because its availability limits growth of plants, limiting the amount of food we produce

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7
Q

Why is all life carbon based

A

It is extremely versatile in terms of the number and variety of chemical bonds that it can form.
Enables creation of a wide array of complex molecules

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8
Q

Why is carbon better than silicon

A

Carbon - Carbon bonds are stronger than silicon to silicon bonds (Carbons are more stable)
More energy released on combustion of carbon to carbon bonds (More energy from carbon based nutrients)
Combustion products of carbon (CO2) are more soluble and recyclable

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9
Q

For all biomolecules structure dictates?

A

Function

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10
Q

Conformation

A

Flexible spatial arrangement of atoms within a molecule (Can be changed without breaking bonds)

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11
Q

Configuration

A

Fixed Spatial arrangement of atoms within a molecule (Cannot be changed without breaking covalent bonds)

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12
Q

Types of Configuration

A

Double Bonds
Chiral Centers

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13
Q

Geocentric (cis-trans) Isomers

A

Have the same chemical formula but differ in the configuration of groups with respect to a non - rotating double bond

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14
Q

Cis

A

on this side (On the same side)

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15
Q

Trans

A

Across (Groups of opposite sides)

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16
Q

Chiral Carbon

A

Has four different substituents attached
These groups may be arranged in different ways in space yielding two stereoisomers in their configuration

17
Q

Construction

A

Biomolecules often constructed exclusively from one stereoisomer. For Example: Proteins are built entirely from L- Amino Acids

18
Q

Interactions

A

Interactions between biomolecules, as well as between biomolecules and small molecules are stereospecific

19
Q

Advantages of creating biomolecules are polymers

A

Simplicity, Recycling Diversity

20
Q

Simplicity

A

Simple and conserved reactions for synthesis and degradation

21
Q

Recycling

A

Biomolecules can be digested back to component building blocks which are reusable

22
Q

Diversity

A

Incredibly complex molecules can be generated

23
Q

4 Major classes of Biomolecules

A

Proteins
Carbohydrates
Nucleic Acids
Lipids

24
Q

Proteins

A

Linear Polymers of Amino Acids
20 different Amino Acids
Amino Acids link together to form linear chains that fold into complex patterns with distinct biological activities

25
Polysaccharides
Monosaccharides linked together to form linear or branched polymers higher order Polysaccharides serve many important biological roles including structural, energy storage and cellular recognition
26
Nucleic Acids
Linear polymers of nucleotide blocks (5 building blocks for DNA and RNA) Involved in all aspects of storage and utilization of genetic information
27
Lipids
Lipids are aggregates of building blocks Lipids serve in energy storage, formation of membranes and signalling
28
Prokaryotes
Small Rapid growth allows quick adaptation Single Compartment, the nuclei which contains nucleic acid
29
Eukaryotes
Large Make up multicellular organisms Membrane Bound Organelle Differentiation of cells to unique and specialized cell types
30
In Vitro
In glass (Studies in Lab)
31
In Vivo
In the living organism
32
First Law of Thermodynamics
In any physical or chemical change, the total amount of energy in the universe remains constant, altho the forms of the energy may change
33
Second Law of Thermodynamics
Tendency in nature is toward ever greater disorder: Total entropy of the universe is continually increasing
34
Enthalpy (H)
Reflects the number and kinds of bonds
35
Entropy (S)
Degree of Radomness
36
Temperatues
In Degress Kelvin
37
Formula of Free Energy
G = H - TS
38
G > 0
Endergonic Non Spontaneous Process Needs Free energy to proceed
39
G < 0
Exergonic Spontaneous processs Release of free energy