Module 1 Flashcards
(39 cards)
Biochemistry is
Study of life at molecular level
Application of the principles of Chemistry to explain biology
Common sets of reactions and principles that underlie all living organisms
Study of molecular logic of life
All organisms use
Building Blocks to create common categories of biomolecules
Foundations of life
Chemical
Energy
Genetic
Evolutionary
Chemical Foundations
Carbon
Oxygen
Hydrogen
nitrogen
All life forms are composed of
Carbon
What is the limiting regnant of the biosphere
Nitrogen because its availability limits growth of plants, limiting the amount of food we produce
Why is all life carbon based
It is extremely versatile in terms of the number and variety of chemical bonds that it can form.
Enables creation of a wide array of complex molecules
Why is carbon better than silicon
Carbon - Carbon bonds are stronger than silicon to silicon bonds (Carbons are more stable)
More energy released on combustion of carbon to carbon bonds (More energy from carbon based nutrients)
Combustion products of carbon (CO2) are more soluble and recyclable
For all biomolecules structure dictates?
Function
Conformation
Flexible spatial arrangement of atoms within a molecule (Can be changed without breaking bonds)
Configuration
Fixed Spatial arrangement of atoms within a molecule (Cannot be changed without breaking covalent bonds)
Types of Configuration
Double Bonds
Chiral Centers
Geocentric (cis-trans) Isomers
Have the same chemical formula but differ in the configuration of groups with respect to a non - rotating double bond
Cis
on this side (On the same side)
Trans
Across (Groups of opposite sides)
Chiral Carbon
Has four different substituents attached
These groups may be arranged in different ways in space yielding two stereoisomers in their configuration
Construction
Biomolecules often constructed exclusively from one stereoisomer. For Example: Proteins are built entirely from L- Amino Acids
Interactions
Interactions between biomolecules, as well as between biomolecules and small molecules are stereospecific
Advantages of creating biomolecules are polymers
Simplicity, Recycling Diversity
Simplicity
Simple and conserved reactions for synthesis and degradation
Recycling
Biomolecules can be digested back to component building blocks which are reusable
Diversity
Incredibly complex molecules can be generated
4 Major classes of Biomolecules
Proteins
Carbohydrates
Nucleic Acids
Lipids
Proteins
Linear Polymers of Amino Acids
20 different Amino Acids
Amino Acids link together to form linear chains that fold into complex patterns with distinct biological activities