Session 9: Post-translational Modification and Protein Targeting Flashcards

1
Q

What is post-translational modification?

A

The processing that some proteins undergo following their production via translation

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2
Q

Where are some common subcellular locations of protein targeting for sorting?

A

Endoplasmic reticulum
Lysosomes
Mitochondria
Nucleus

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3
Q

What 4 things are required for protein sorting?

A

A signal
A receptor that recognises the signal and directs to the correct membrane
Translocation machinery
Energy to transfer the protein to its new place

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4
Q

What is the nature of signal targeting proteins to the ER?

A

A signal sequence that is recognised by SRP during translation

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5
Q

What is the location of the signal within the primary sequence of proteins destined for the ER?

A

N- terminus

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6
Q

Is the protein folded or unfolded during transfer to the ER?

A

Unfolded

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7
Q

What specialist proteins are involved in targeting proteins to the ER?

A

Signal Recognition Protein (SRP)

SRP receptor

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8
Q

Is the signal retained or cleaved once it reaches the ER?

A

Cleaved by signal peptidase

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9
Q

Does the process of targeting proteins to the ER require energy?

A

Yes. the hydrolysis of GTP by SRP

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10
Q

What is the nature of the targeting signal needed to direct proteins to the nucleus?

A
Nuclear Localising Signal (NLS)
Basic sequence (Arg/Lys)
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11
Q

Where is the primary sequence of the targeting signal located on proteins destined for the nucleus?

A

On the surface of folded protein

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12
Q

Are the proteins that are destined for the nucleus folded or unfolded during transfer?

A

Folded

They pass through large pores in the nuclear membrane

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13
Q

What specialist proteins are involved in the trafficking of proteins to the nucleus?

A

Carrier protein: Importin

RanGTP

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14
Q

Is the signal retained or cleaved once it reaches the nucleus?

A

Retained

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15
Q

Does the process of targeting signals to the nucleus require energy?

A

Yes, the hydrolysis of GTP

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16
Q

What is the nature of the targeting signal that sends proteins to mitochondria?

A

It is an amphipathic signal that targets proteins to the matrix

17
Q

What is the location of the signal within the primary sequence of proteins destined for mitochondria?

A

N-terminus

18
Q

Are the proteins that are destined for mitochondria folded or unfolded during transfer?

A

They are held partially folded by chaperones

19
Q

What specialist proteins are involved in the trafficking of proteins to the mitochondria?

A

MSF

Tom and Tim

20
Q

Is the signal retained or cleaved once the protein has been delivered to mitochondria?

A

The signal is cleaved

21
Q

Does the process of targeting signals to mitochondria require energy?

A

Yes, requires ATP

22
Q

What is the nature of the targeting signal needed to direct proteins to lysosomes?

A

Post translational addition of Mannose-6-Phosphate

Phosphate is added to 6th carbon on mannose sugar in the golgi

23
Q

Where is the primary sequence of the targeting signal located on proteins destined for lysosomes?

A

Must be signal patch to distinguish lysosomal proteins from other mannose-labelled proteins

24
Q

Are the proteins that are destined for the nucleus folded or unfolded during transfer to lysosomes?

A

Folded (delivered via vesicle)

25
What specialist proteins are involved in the trafficking of proteins to the lysosomes?
M6P receptor in the trans-golgi
26
Is the signal retained or cleaved once the protein has been delivered to lysosomes?
Phosphate is removed by phosphatase
27
Does the process of targeting signals to lysosomes require energy?
The process requires INDIRECT use of ATP to remove the phosphate
28
What is the nature of the targeting signal needed to retain proteins in the ER?
KDEL
29
Where is the primary sequence of the targeting signal located on proteins destined to be retained in the ER?
C-terminus
30
Are the proteins that are destined for the nucleus folded or unfolded during ER retention?
Folded (delivered via vesicle)
31
What specialist proteins are involved in the trafficking of proteins to be retained in the ER?
KDEL and KDEL receptor in cis-golgi
32
Is the signal retained or cleaved once the protein is retained in the ER?
Retained
33
Does the process of retaining proteins in the ER require energy?
No, no energy is required