Topic 3 Review - Archaea Flashcards

(39 cards)

1
Q

What were the first archaea discovered?

A

methanogens

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2
Q

Where would you find Halobacterium salinarium?

A

“salt lovers”
- Dead sea

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3
Q

Where would you find Pyrococcus furiosus?

A

Pyro = temperature
- hydrothermal vents

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4
Q

Where would you find Picrophilus oshmiae?

A

Picro = acid
- volcanic regions

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5
Q

Where would you find methanogenium frigidum?

A

Methan = methane generator
Frigid = low temp
- Antarctica

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6
Q

Typical size?

A

0.5-5um

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7
Q

Shapes of archaeal cells

A
  • rods, cocci, spirals
  • pleomorphic (irregular)
  • Thermoproteus (Rectangles)
  • Haloquadratum (squares)
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8
Q

What are characteristics of the cytoplasm?

A
  • single circular chromosomes and lack a mem. bound nucleus
  • hitsones
  • microcompartments/inclusion bodies like bacteria
  • DNA enzymes similar to euk.’s
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9
Q

What are histones?

A

Positively charged proteins that DNA wrap around

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10
Q

Do archaeal cells have an outer membrane?

A

No

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11
Q

Do archaeal cells have a plasma membrane?

A

Yes

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12
Q

How is the plasma membrane bilayer constructed in Archaea?

A
  • Glycerol-1-phosphate
  • Phytanyl side chains
  • ether linkages
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13
Q

Why is the monolayer for Archaea so important?

A

Stability

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14
Q

What linkages do archaea cells have that euk.’s and bacteria dont?

A

Ether linkages

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15
Q

What properties would you see of Archaea living in high-temperature environments?

A

Biphytanyl monolayer

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16
Q

What are archaea cell walls composed of?

17
Q

What is the difference between bacterial and archaeal cell walls?

A

Bacteria:
- NAG/NAM
- beta 1-4 linkages

Archaea:
-NAG/NAT
- beta 1-3 linkages

18
Q

What is the function of cannulae in archaea?

A

link cells together

19
Q

What is the main difference between bacterial and archaeal flagellum?

A

Bacteria:
- PMF as energy

Archaea:
-ATP

20
Q

What are the four major phyla of Archaea?

A
  1. Euryarchaeota
  2. Crenarchaeota
  3. Thaumarchaeota
  4. Nanoarchaeota
21
Q

Where do Crenarchaeota live?

A

Extreme envrionments:
- thermophiles (high temp.)
- acidophiles (low pH)
- barophiles (high pressure)

22
Q

What adaptations do archaea possess to sustain high temperatures?

A
  • tetraether lipid monolayers
  • modified proteins
  • chaperone protein complexes
  • thermostable DNA-binding proteins
23
Q

What do these modified proteins in Archaea consist of?

A
  • alpha-helical regions
  • salt bridges
  • more arginine/tyrosine
  • less cysteine/serine’s
24
Q

What are euryarchaeota?

A

Halophiles (salt lovers)

25
What does it mean to be phototrophic?
without chlorophyll or electron transport chain
26
What does bacteriorhodopsin do?
harnesses light energy and produces PMF (trans and cis)
27
What are Euryarchaetoa?
Methanogens
28
How can you tell bacteriorhodopsin is in effect?
A red hue is produces
29
What are methanogens and what do they do?
- anaerobes (no O2) - reduce CO2 with H2, produce CH4 and H2O
30
Where can you find methanogens?
- anoxic sediments (swamps) - animal GI tracts - hydrothermal vents - biodegradation facilities - In the guts of termites
31
What comprises TACK superphylum?
Thaum-, Aig-, Cren-, Kor- archaeota
32
Thaumarchaeota is most known for...
its ability to oxidize ammonia (autotrophic)
33
What are two types of thaumarchaeota?
1. mesophiles 2. psychrophiles
34
What is the key member of the DPANN superphylum?
Nanoarchaeota - piggy back on ignicoccus hosts
35
Nanoarchaeota are considered to be....
...the smallest living organisms on earth
36
What are some key features of DPANN?
-small cell size -small genomes -restricted metabolism -interspecies interaction
37
What is the name of the archaeota phylum thats derived from a fantastically mythical world?
Asgard superphylum
38
What does the asgard superthylum contain?
Lokiarchaeota and thorarchaeota
39
What archaeota is thought to be the closest relative to all complex life?
Lokiarchaeota