Urines Flashcards

(44 cards)

1
Q

What tests are done on urine samples

A

Sedimax analysis for wcc, rcc, epi count
HCG/Pregnancy Test
Listeria rapid antigen test

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2
Q

How does the SediMax work

A

On board the analyser, urine is mixed until homogenised

0.2ml of the sample is taken up and transferred ino a special disposable cuvette by a pipette

The pipette is then rinsed with instrument feed water (IFW) to avoid cross-contamination

Cuvettes containing sample are then centrifuged at 2000 RPM for 10 seconds which forces all the particles in the urine to sediment onto a single plane on the bottom of the cuvette, this is where the camera focuses on

The built-in camera then takes both bright-field and phase-contrast pictures through a microscope at 10 different points across the specimen

A high-performance image evaluation software then processes all of the images to detect and classify and particles

All the images are then stored on the analysers memory which can hod 10000 records

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3
Q

What is the principle behind the SediMax

A

A fully automated urine analyser

Uses bright-field and phase-contrast microscopy to visualise and recognise formed elements of urine

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4
Q

What cells can the SediMax identify?

A

Red Blood Cells (RBC);
White Blood Cells (WBC);
White Blood Cell clumps (WBCc);
Hyaline Casts (HYA);
Pathological Casts (PAT);
Squamous Epithelial Cells (EPI);
Non-Squamous Epithelial Cells (NEC);
Bacteria (BAC); Bacteria Rods(BACr);
Bacteria Cocci(BACc)
Yeast (YEA);
Crystals (CRY):
Calcium-oxalate monohydrate (CaOxm),
Calcium-oxalate dihydrate (CaOxd),
Uric acid (URI),
Triple phosphate (TRI);
Mucus (MUC),
Sperm (SPRM),
Amor­phous material (AMO)

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5
Q

How is the SediMax maintained?

A

Run Milton disinfectant once every day first thing in the morning
QC ran twice a day, once in morning, once in afternoon -> Two controls, a high and a low control

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6
Q

What urines are cultured

A

Any urines with a white cell count greater than 20
Urines are also cultured upon request or if the patient is immunocompromised i.e. from St. Vincent’s ward etc

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7
Q

What will you have to do if the white cell count is very high on a urine sample?

A

If WCC is very high you will have to dilute the sample 1 in 10 in saline

You then run the sample as normal but change the dilution factor so that the correct result goes across

If wcc still too high then repeat the dilution to create a 1 in 100 dilution

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8
Q

What is the name of the tubes used on the SediMax?

A

Sedivette tubes

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9
Q

How much urine is needed for analysis of urine?

A

At least 2 mls -> if less urine then this than a manual will have to be done using a cell counter

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10
Q

How many pictures does the SediMax take of a sample?

A

SediMax will take 10 pictures of different areas on the sample

If wccs too high in a certain picture the SediMax will not count this: 9/10 pictures taken

7/10 pictures or less will have to be diluted

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11
Q

Do you culture a urine if the bacterial count or rcc is high?

A

No -> only if wccs also high

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12
Q

What would a high urine bacteria count without a raised white cell count mean?

A

Poorly taken sample
Urine is meant to be a midstream urine
Bacteria without wcc = commensal bacteria
Patient could also be immunocompromised

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13
Q

What would a raised red cell count without wcc mean?

A

Patient could be menstruating
It would be up to the consultant to determine the cause of the raised rbcs, the urine can be cultured if requested

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14
Q

When would you carry out a manual urine

A

Only done when there is very little sample i.e. less than 2mls

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15
Q

How would you carry out a manual urine?

A

Carried out using a cell counter
Cell counter composed of six squares broken down into 16 squares
Manually count the ebcs, rbcs and epis in one of the sets of 16 squares
If too many cells in sample you can carry out a dilution just make sure to multiply results up to account for the dilution factor

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16
Q

How did you deal with casts and crystals in urine

A

There is no quantitative measurement of either
They are detected through microscopy
Detection is qualitative
Detection is not diagnostic, only really informs the consultant on the patient’s diet

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17
Q

Talk about the HCG pregnancy test

A

One of our urgent tests as the patient is usually due to go for surgery
A negative pregnancy test is required prior to surgery for females
It’s a simple antigen test which only takes 3 minutes
If there is any feint line showing any positivity then a second test should be carried out
If still unsure then ask another scientist

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18
Q

Talk about the legionella or pneumococcal antigen tests

A

Specific antigen tests done upon request
Pneumococcal antigen test usually done if query pneumoniae -> detects S. pneumo in urine
Legionella antigen test only done for patients in A&E or HDU/CHDU but can be added on by the consultants if required

19
Q

What agar are positive urines put up on?

A

Chromagar Orientation Plates

20
Q

What is the Chromagar Orientation plate?

A

a non-selective chromogenic culture medium intended for use in the qualitative direct detection, differentiation and presumptive identification of uropathogens to aid in the diagnosis of urine tract infection

21
Q

What are the most common urinary pathogens?

A

E. Coli (majority)
Enterobacter (Ents)
Staphylococcus Saprophyticus in young women

22
Q

What colour will an E. Coli grow on urine chromagar?

A

E. Coli = pink

23
Q

What colour will GNBs grow on brilliance chromagar

A

GNBS = large and blue but some can also be colourless

24
Q

What colour will your Ents grow on Brilliance chromagar

A

Ents = bright blue (smaller than GNBS and not as dark)

25
What colour will S. saprophyticus grow on brilliance?
Light pink -> not as bright as E. Coli
26
How will Pseudomonas grow on Brilliance
Pseudomonas will have a greeny metallic sheen to the colonies
27
For how long are the agars incubated?
At least 16 hours Preferably 16 - 24 hours but GNBs usually grow in a few hours
28
How do you carry out a colony count for urines
1-9 colonies = <10^4 cfu/ml 10-100 colonies = 10^4-10^5 cfu/ml >100 colonies = >10^5 cfu/ml
29
Why do we carry out a colony count for urines?
Less than 5 colonies/scanty growth is rarely every causative of infection Unless the organism is a query GNB then we don't pick a scanty growing organism i.e. less than 5 10 colonies
30
How is growth reported for urines
Pure growth Predominant growth - 2 different organisms -> usually ID both Mixed growth - 3+ colonies -> don't ID these
31
What would you do with if a query E. coli and a uery Pseudo grew on the plate
Put up a purity plate for each ID both organisms Sens for both?
32
What would cause a very mixed growth on a plate?
Mostly just an incorrectly taken sample i.e. not a mid stream urine -> contains commensals
33
How could you tell if a sample was poorly taken?
Raised epithelial cells Raised bacterial cells Normal white blood cells Mixed growth on plate if cultured
34
What would you do if there was predominant growth of E. Coli but the other organisms was a coag neg staph?
You can ignore the coag neg staph as this is probably just a commensal and just ID the E. Coli
35
What would you do if there was predominant growth of an E. Coli but the other organism was a query GNB
You must ID both organisms Unlike with a coag neg staph you cannot assume the GNB is not the infectious agent - it probably isnt but just to be safe you must put up both
36
Why might there be no growth on a plate but urine was positive
Patient is probably on antibiotics i.e. the wccs and bacteria are high because they have an infection but the bacteria cannot grow just to the presence of antibiotics in the sample The bacteria causing the infection could also be fastifious e.g. TB (rare) or Chlamydia
37
What would you do with a scanty growing organism where there is less than 10 colonies on the plate?
Less than 10 colonies is rarely ever infectious so unless it is a GNB we don't pick it
38
Talk about E. Colis in urine
E. Coli is the most frequently seen bacteria causing UTIs Grow as pinky/purple colonies on Chromagar Query E. Colis don't need to be Maldi'd before going for sens Some E. Coli's may be pale if they havent been able to produce their pink colour yet
39
What would you do with a white colony on a Brilliance chromagar
Query Staph/Query Yeast S. aureus will be yellow coloured but a coag neg staph maybe white Colonies will look spiky if query yeast Staphyslide -> Staphaurex agglutination test -> S. aureus is coag pos, CNS or Yeast will be negative Wet prep for yeast to look for budding
40
What is a wet prep?
Looking for budding yeast cells Add 1 drop of saline to a glass slide Pick up the query colonies with a glass coverslip and smear onto the slide
41
How will lactobacillus appear on Orientation agar
Lactobacillus can usually seen as a pink haze in the background agar The lactobacillus is just a commensal The background will be pink, colonies will not be pink (Not like E. Coli), pale colonies
42
What organisms do you send for Maldi ID?
All organisms other than E. Coli
43
What do you do after Maldi has ID'd your organism
See if the preliminary ID matches the Maldi ID -> if not then why Write the ID of the organism on the plate Will have to merge PID and Maldi ID for results e.g. ?GNB to Klebsiella etc
44