Very Much Flashcards

(32 cards)

1
Q

Inhibitors of DNA polymerase

A

nitrate, crystals, hemoglobin, and beta-human chorionic gonadotropin

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2
Q

critical for monitoring reagents for carry-over contamina- tion.

A

Reagent blank or contamination controls

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3
Q

aimed at a target that is always present can be incorporated into an amplification assay.

A

amplification control

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4
Q

are amplification controls that mon- itor particular steps of an amplification method

A

Internal controls

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5
Q

FDA-Approved/Cleared Test Methods

Methicillin Resistant Staphylococcus aureus

A

Real-time PCR

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6
Q

Mycoplasma pneumoniae

A

16S rDNA
P1 adhesion gene

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7
Q

Chlamydophila pneumoniae

A

Cloned Pst I fragment
16S rRNA
MOMP

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8
Q

Legionella

A

5S rRNA mip gene

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9
Q

Bordetella pertussis

A

IS 481

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10
Q

Streptococcus pneumoniae

A

lytA (autolysin)
pbp2b

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11
Q

Mycobacterium tuberculosis

A

16S rRNA

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12
Q

test takes 6.5–8 hours to complete

A

AMPLICOR MTB

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13
Q

Treponema pallidum

A

polA

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14
Q

Mycoplasma genitalium

A

rDNA gene

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15
Q

Ureaplasma urealyticum

A

Urease gene

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16
Q

Haemophilus ducreyi

A

groEL gene
p27

17
Q

Neisseria gonorrhoeae

18
Q

Chlamydia trachomatis

19
Q

Inhibits protein synthesis

A

Macrolides (erythromycin)

20
Q

Staphylococcus aureus

A

Oxacillin - mecA

21
Q

Streptococcus pneumoniae

A

Penicillin - pbp1a and pbp1b

22
Q

Enterococcus

A

Vancomycin - vanA

23
Q

Salmonella

A

Quinolones - gyrA

24
Q

Mycobacterium
tuberculosis

A

Rifampin - rpoB

25
This method has been used for typing numerous species, including strains of Pseudomonas aeruginosa, Mycobacterium avium, Escherichia coli, N. gonorrhoeae, VRE, and MRSA.
Pulsed Field Gel Electrophoresis
26
Criteria for PFGE Pattern Interpretation Closely related '
1 2–3. Test isolate is closely related to the outbreak strain
27
This method is performed by cutting DNA with restriction enzymes, resolving the resulting frag- ments by gel electrophoresis, and then transferring the separated fragments to a membrane for probing with a specific probe.
Restriction Fragment Length Polymorphism Analysis
28
Performance Comparison of Representative Molecular Epidemiology Methods Plasmid analysis
Good -> Good -> Good -> High -> Good
29
Performance Comparison of Representative Molecular Epidemiology Methods PFGE
High -> High -> High -> Moderate -> Good-Moderate
30
Performance Comparison of Representative Molecular Epidemiology Methods Chromosomal RFLP
High -> Good -> Good -> High -> Moderate-poor
31
Performance Comparison of Representative Molecular Epidemiology Method PCR-RF LP
Good -> Moderate -> Good -> High -> High
32
Performance Comparison of Representative Molecular Epidemiology Method Sequencing
High -> High -> High -> Moderate -> Good-High