wk 5 Flashcards
(18 cards)
: ability to separate nucleic acids
based on their size or other properties
Resolution
: ability to visualize or identify
nucleic acids after separation
Detection
are the most
practical and commonly used methods
Gel and capillary electrophoresis
DNA can also be spotted and detected using
specific hybridization probes
refers to the movement of
molecules under an electric current.
Electrophoresis
charge properties
phosphate is negative
dna and rna is positive
Used in bacterial culture dishes and electrophoresis.
AGAROSE GELS
what does high and low concentration of agarose gel indicate or do
Higher concentration: Resolves smaller DNA fragments.
Lower concentration: Resolves larger DNA fragments.
Used for very large DNA fragments
PULSED-FIELD GEL ELECTROPHORESIS (PFGE)
Alternates positive and negative electrodes.
Field-Inversion Gel Electrophoresis (FIGE) 1.
Applies uniform field strength.
Contour-Clamped Homogeneous Electric Field (CHEF) 2.
Uses transverse reorientation.
Transverse Alternating-Field Electrophoresis (TAFE) 3.
Rotates the gel for better separation.
Rotating Gel Electrophoresis (RGE) 4.
Used for small DNA fragments, RNA, and proteins.
POLYACRYLAMIDE GELS
Commonly used for:
DNA sequencing.
Mutation analysis.
Nuclease protection assays.
POLYACRYLAMIDE GELS
is widely used for separating organic and inorganic
substances.
Capillary electrophoresis (CE)
Used in pharmaceuticals, carbohydrates, metal ions, and nucleic acid analysis.
CAPILLARY ELECTROPHORESIS