enzymes Flashcards

(37 cards)

1
Q

catalysts

A

enhance rate of reaction by a factor of millions relative to an uncatalysed reaction. not permanently altered

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2
Q

where does the substrate bind to the enzyme?

A

the active site

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3
Q

are enzymes specific?

A

enzymes are highly specific. they discriminate between substrates with similar structures

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4
Q

how do enzymes accelerate reaction rates?

A

by decreasing the activation energy

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5
Q

what are catalytic groups?

A

amino acid side chains that line the active site actively participate in the catalytic process

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6
Q

is the active site big?

A

no its a small site on the protein. most of amino acids in an enzyme are not in contact with substrate

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7
Q

what is the active site formed by?

A

amino acids that come from different parts of the linear amino acid sequence

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8
Q

what weak attractions bind the substrate to the active site?

A

ionic, H-bonds , hydrophobic

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9
Q

induced fit model

A

enzyme conformation changes to accomodate the substrate

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10
Q

what changes the structure of the active site?

A

non-covalent interactions between enzyme and substrate

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11
Q

does proximity and orientation of S to catalytic groups matter?

A

YES

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12
Q

hydrolysis of sucrose by the enzyme sucrase

A

sucrase is a digestive enzyme that catalyses the hydrolysis of sucrose to fructose and glucose. The glycosidic bond is broken by hydrolysis

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13
Q

example of a natural antibacterial agent

A

lysozyme

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14
Q

what does lysozyme do?

A

breaks the glycosidic bond between sugar D and E. enzyme is breaking up cell wall of bacteria so it is destroyed and all contents are released.

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15
Q

what factors affect the rate at which enzymatic reactions proceed?

A

temperature, pH , enzyme concentration, substrate concentration , the presence of inhibitors or activators

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16
Q

effect of temp on enzyme-catalysed reactions

A

enzymes are sensitive to temp
optimum temp- operates at max efficiency
optimum temp close to normal temp of organism it comes from

17
Q

optimum pH of pepsin

18
Q

optimum pH of trypsin

19
Q

what is denaturation?

A

loss of a proteins native structure

20
Q

can a denatured protein work?

A

no it is biologically inactive

21
Q

what structure does an enzyme loose if it is denatured ?

A

secondary and tertiary

22
Q

enzyme inhibitors

A

enzyme reaction rates can be inhibited or decreased by enzyme inhibitors

23
Q

example of an inhibitor?

A

Rifampicin: binds to RNA pol in bacteria- prevents initiation of transcription

24
Q

competitive inhibitors

A

bind to the active site of an enzyme, competing with the substrate - structurally similar to S

25
non-competitive inhibitors
bind to another part of an enzyme, causing the enzyme to change shape and even if the S can bind the active site is less effective
26
what happens in feedback inhibition
the end product of a metabolic pathway is the enzyme inhibitor and shuts down the pathway
27
what does feedback inhibition prevent
prevents a cell from wasting chemical resources by synthesising more product than is needed
28
covalent modification
reversible interconversion between active site and inactive forms
29
what does phosphorylation of a protein by a protein kinase do
can either increase or decrease the proteins activity
30
what are proenzymes or zymogens ?
several enzymes stored as inactive precursors, activated by irreversible cleavage of 1 or a few peptide bonds
31
what is prothrombin?
a blood-clotting enzyme
32
what triggers the conversion of prothrombin to thrombin ?
injury to a blood vessel
33
what does thrombin convert
fibrinogen to fibrin
34
enzymes catalytic groups are always beside each other in the linear polypeptide chain
false
35
ES are stabilised by covalent interactions
false
36
the structure of an enzyme is changed following a catalytic reaction
false
37
the active site if an enzyme and the substrate fit exactly together
false