enzymes Flashcards
(37 cards)
catalysts
enhance rate of reaction by a factor of millions relative to an uncatalysed reaction. not permanently altered
where does the substrate bind to the enzyme?
the active site
are enzymes specific?
enzymes are highly specific. they discriminate between substrates with similar structures
how do enzymes accelerate reaction rates?
by decreasing the activation energy
what are catalytic groups?
amino acid side chains that line the active site actively participate in the catalytic process
is the active site big?
no its a small site on the protein. most of amino acids in an enzyme are not in contact with substrate
what is the active site formed by?
amino acids that come from different parts of the linear amino acid sequence
what weak attractions bind the substrate to the active site?
ionic, H-bonds , hydrophobic
induced fit model
enzyme conformation changes to accomodate the substrate
what changes the structure of the active site?
non-covalent interactions between enzyme and substrate
does proximity and orientation of S to catalytic groups matter?
YES
hydrolysis of sucrose by the enzyme sucrase
sucrase is a digestive enzyme that catalyses the hydrolysis of sucrose to fructose and glucose. The glycosidic bond is broken by hydrolysis
example of a natural antibacterial agent
lysozyme
what does lysozyme do?
breaks the glycosidic bond between sugar D and E. enzyme is breaking up cell wall of bacteria so it is destroyed and all contents are released.
what factors affect the rate at which enzymatic reactions proceed?
temperature, pH , enzyme concentration, substrate concentration , the presence of inhibitors or activators
effect of temp on enzyme-catalysed reactions
enzymes are sensitive to temp
optimum temp- operates at max efficiency
optimum temp close to normal temp of organism it comes from
optimum pH of pepsin
2
optimum pH of trypsin
8
what is denaturation?
loss of a proteins native structure
can a denatured protein work?
no it is biologically inactive
what structure does an enzyme loose if it is denatured ?
secondary and tertiary
enzyme inhibitors
enzyme reaction rates can be inhibited or decreased by enzyme inhibitors
example of an inhibitor?
Rifampicin: binds to RNA pol in bacteria- prevents initiation of transcription
competitive inhibitors
bind to the active site of an enzyme, competing with the substrate - structurally similar to S