Exam 2 Flashcards

(53 cards)

1
Q

amorphic alleles

A

produces no or very little proteins, usually recessive

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2
Q

Hypomorphic Alleles

A

Produce Reduced Level or Activity of Otherwise Normal Protein. Usually Recessive.

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3
Q

Hypermorphic Alleles

A

Produce Higher Level or Activity of Otherwise Normal Protein. Usually Dominant.

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4
Q

Antimorphic Alleles

A

Produce Proteins That Reduce the Level or Activity of Protein Made by Wild-type Allele. Usually Dominant in Presence of Wild-type Allele. Extremely Rare “Dominant/Negative” Human Alleles.

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5
Q

Spatiotemporal Alleles

A

Heterochronic (Difference in Timing of Expression) or Ectopic (Difference in Location of Expression) Alleles Could be Hypo/Hyper/Amo/

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6
Q

Neomorphic Alleles

A

Produce Protein That No Longer Perform the Wild-type Gene Function, but Instead Have a New Function. Jokers Wild, Shows No, Co, or Complete Dominance.

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7
Q

Mullerian Allelomorphy

A

Mutant Specrtrum Caused by Mutagenesis

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8
Q

A DNA sequence produces a mutant protein in which several amino acids in the middle of the protein differ from the normal protein. What kind of mutation could have occurred?

A

An addition and a deletion mutation

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9
Q

Shine- Dalgaro sequence

A

AGGAGG, a sequence which preceded the AUG start codon, facilitating initiation

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10
Q

initiation complex

A

small ribosomal subunit + initiation factors + mRNA at codon AUG

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11
Q

Translation of mRNA: 3 steps

A

Initiation: binding of ribosome to mRNA

Elongation: Sequential addition of amino acid to COOH end by many charged tRNA

Termination: Release factors bind when stop codon are found at the ribosome A site. Ribosome, Polypeptide and mRNA disassociate.

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12
Q

Sickle- cell anemia

A

recessive genetic disease in which afflicted individuals are homozygous for the HbS hemoglobin allele

(Heterozygotes are carriers of the affected gene but are largely unaffected)

an example of “Hypomorphy”

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13
Q

Sickle- cell anemia is caused by:

A

The difference of a single peptide. Glu #6 becomes Val #6.

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14
Q

Hypomorphy (Partial Loss
of Function)

A

Point Mutation
Changes Identity of One or
a Few Amino Acids, Resulting
in a Damaged Protein that
Still Retains Some Wild-type
Function.

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15
Q

Amorphic (Null or
Complete Loss of Function)

A

Allele Produces Little
Or No Wild-type Gene
Function

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16
Q

Neomorphic
(Gain of Function)

A

Allele Produces a Novel Protein
That May Have Little or No
Function in Common With
the Wild-type Allele

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17
Q

one gene encodes:

A

one polypeptide

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18
Q

Alkaptonuria and phenylketonuria(2 genetic diseases) are the result of:

A

mutations that lead to metabolic blocks

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19
Q

phenylketonuria

A

results when phenylalanine is not converted to tyrosine

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20
Q

Stop Codons:

A

No Normal tRNA Will Bind to Stop Codons.

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21
Q

peptidyl transferase

A

catalyzes peptide bond formation between the amino acid on the tRNA at the A site and the growing peptide chain bound to the tRNA in the P site

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22
Q

a peptide bond is formed by:

A

a dehydration reaction between the carboxyl group of one amino acid and the amino group of another

23
Q

Initiation of translation(3 steps):

A
  1. mRNA binds to small ribosomal subunit along with initiation factors(IF 1 2 3)
  2. Initiatior tRNA binds to mRNA codon in P site, IF 3 is released
  3. Large ribosomal subunit binds to complex, IF 2 and 3 are released, EF- Tu binds to tRNA, facilitating entry into A site.
24
Q

Elongation during translation(6 steps):

A
  1. 2nd charged tRNA enters A site, facilitated by EF- Tu, first elongation step commences
  2. Peptide bond forms, uncharged tRNA moves to the E site and subsequently out of the ribosome, the mRNA has been translocated three bases to the left, causing the tRNA bearing the dipeptide to shift to the left in to the P site.
  3. the first elongation step in complete, facilitated by EF-G. The third charged tRNA is ready to enter the A site.
  4. Third charged tRNA has entered A site facilitated by the EF- Tu, 2nd elongation step begins.
  5. Tripeptide formed, 2nd elongation step completed, uncharged tRNA moves to E site.

MORE ELONGATION

  1. Polypeptide chain synthesized and exiting ribosome
25
Termination of translation(2 steps)
1. tRNA and polypeptide chain released 2. GTP- dependent termination factors stimulate the release of tRNA and the disassociation of the ribosomal subunits. The polypeptides fold into a protein.
26
TATAAT (Pribnow's box)
A consensus sequence, which is an essential part of promoter site, for DNA transcription. (-10 sequence) other consensus sequence is TTGACA
27
inducible enzymes
enzymes produced by bacteria to adapt to their environment, only when specific substrates are present- "on and off" in cells
28
constitutive enzymes
enzymes continuously produced regardless of chemical makeup of environment- always precent in cells
29
negative control
genetic expression occurs unless it is shut off by some form of a regulator molecule
30
positive control
transcription occurs only is a regulator molecule directly stimulates RNA production
31
Mutation results in abnormal protein structure from:
Mutation in coding region Mutation of RNA splicing
32
Mutation with normal protein structure from:
Mutation affecting gene regulation or dosage Mutation of RNA splicing Mutation disrupting RNA stability
33
MAJOR cause of disease(from mutation):
Loss of protein function
34
Biological Information Processing: Central Dogma is
Code stored in DNA is transcribed into a code, a codon sequence in mRNA , which is translated into an amino acid sequence in protein. Protein is the phenotype.
35
regulatory protein bind only int he presence of:
effector
36
effector molecules:
bind to regulatory proteins, to promote or prohibit RNA binding to promoter, acting as sensors
37
The Operon:
Bacterial Transcripts encode information for more than one protein
38
Catabolism of Lactose:
Glucose and Galactose are Carbon Sources for Bacterial Chemosynthesis via Glycolytic and Other Pathways
39
repressor molecule
The lacI gene regulates transcription of the structural genes by producing a repressor molecule
40
allosteric repressor
it interacts reversibly with another molecule, causing both a conformational change in three-dimensional shape and a change in chemical activity
41
catabolite-activating protein (CAP)
involved in repressing expression of the lac operon when glucose is present Binds to cAMP and CAP site(on operon)
42
catabolite repression
inhibition of expression of the lac operon when glucose is present
43
The Lac Promoter:
is Under Positive and Negative Regulation
44
The Lactose Sensing System:
is a Negative Regulatory System.
45
CAP Binding
Sensing Starvation for Glucose
46
Disassociation of O and Repressor
Senses Availability of Lactose
47
The Tryptophan (trp) Operon in 
E. coli Is a:
Repressible Gene System
48
In the presence of tryptophan:
the operon is repressed and none of the enzymes are produced
49
corepressor
tryptophan to trp operon, represses system and block enzymes from being made
50
attenuator
a regulatory site in the leader sequence, which preceeds trp structural genes
51
attenuation
Transcription of the leader region of the trp operon can occur even when the operon is repressed in the presence of tryptophan In the absence of tryptophan, transcription is not terminated in the leader region and proceeds through the entire operon
52
terminator
In the presence of tryptophan, the hairpin structures formed act as a transcriptional terminator
53