Genetics Flashcards

1
Q

____ are the foundation for all cellular structure and function

A

Proteins

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2
Q

How many genes in the human genome

A

50,000

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3
Q

What percent of DNA is used to make proteins?

A

10%

8% is regulatory and 2% is the actual code for the protein

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4
Q

Exons

A

Portion of gene that is transported out of the nucleus and translated into a protein

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5
Q

Different types of introns

A

Portion of gene removed from RNA transcript before translation.

  • Non coding part
  • No translation to protein (RNA splicing)
  • Regulation of gene expression
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6
Q

What factors may effect transcription?

A

External factors such as toxins and medicine
Internal factors such as cytokines

Both can elicit or inhibit RNA transcription.

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7
Q

Epigenetics and examples

A

Extra-DNA modifications to the genome. Influences phenotype. Does not change the DNA sequence and is not encoded in the DNA sequence.

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8
Q

Examples of epigenetics that can affect genome

A

Chemical compounds. Methylation silences.
Can be inherited
Can be acquired by external factors such as diet, pollutants.

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9
Q

How does methylation affect the genome

A

It silences the gene. No transcription.

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10
Q

Autosome vs allosome

A

Autosome: Homologous pairs (1-22)
Allosome: Sex chromosomes (23)

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11
Q

How is DNA wound?

A

Double helix organized by histones into nucleosomes. Condensed into chromatin that make up chromatids.

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12
Q

Locus

A

Location of a gene/marker on a chromosome.

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13
Q

Diploid cells have ___ loci per gene

A
  1. One per chromosome
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14
Q

Allele:

A

Gene variant at a particular locus.

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15
Q

Homozygous vs heterozygous

A

Homo: Both alleles are the same on each gene locus.
Hetero: different alleles. Some genes have few alleles, other have thousands.

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16
Q

Non-mendelian genetics

A

Penetrance (complete and incomplete) and expressivity.

Both can be affected by lifestyle/environmental factors.

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17
Q

Penetrance

A

Likelihood of manifesting a particular phenotype given the same genotype.

Complete- everyone with the same genotype manifests the same phenotype.

Incomplete (variable)- Everyone has the same genotype, but some do not manifest the same phenotypes.

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18
Q

Expressivity

A

Degree to which the phenotype is expressed.

Variable expressivity: Degree of phenotype expression varies between individuals with the same genotype.

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19
Q

Mendelian Inheritance (6 patterns of inheritance are observed)

A
Co-dominant 
Autosomal dominant 
Autosomal recessive 
X-linked dominant 
X- linked recessive 
Mitochondrial
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20
Q

Autosomal dominant disorder passing down rate

A

Each child has a 50% chance of inheriting the disorder.

Affects male and females in each generation

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21
Q

Ocular examples of autosomal dominant disorders

A

Retinitis Pigmentosa. Progressive vision loss.

Dominant Optic Atrophy. Progressive vision loss.

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22
Q

Retinoblastoma

A

Rb1 gene mutation.
90% of patients who have the gene will develop the condition.

Considered autosomal dominant with reduced penetrance.

Usually unilateral.

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23
Q

Autosomal recessive disorder passing down rate.

A

Each child has a 25% chance of being affected.
Both parents must be at least heterozygous (carriers) to transmit the disorder.
Appears equally in male and female children of unaffected parents.

24
Q

Autosomal recessive disorder almost always associated with the _____ of the affected gene.

A

Loss of function.

25
Ocular examples of autosomal recessive
Retinitis pigmentosa | Congenital stationary night blindness
26
Sickle Cell disease | What kind of mutation is it?
``` Point mutation on chromosome 11 Missense mutation (1 change in BP) ```
27
What happens in patients that have sickle cell anemia?
Lowered levels of oxygen cause crisis. | Cells sickle and become sticky, blocking blood flow and can cause clot formation.
28
__% of african americans have sickle cell traits.
9 | 1 in 600 AA have sickle cell anemia.
29
Ocular manifestations of
Ischemia causes retinopathy "sea fan" neovascularization Vitreous hemorrhages Retinal detachements
30
Codominant inheritance
One gene has more than one allele that can be expressed. Phenotype is influenced by both inherited alleles. Ex: ABO locus
31
X-linked dominant disorders inheritance
Affected males pass the disorder to all daughters, but no sons. Affected heterozygous female pass condition down to half their sons and daughters.
32
Ocular example of x linked dominant disorder
Ocular albinism
33
Fragile X syndrome
``` Tri-nucleotide repeat disorder Variable penetrance Variable expression -males express more than females -Ocular manifestations (strabismus and refractive errors) ```
34
X-linked recessive disorders affect males or females more?
Males. Asymptomatic female carriers transmit the disorder to 50% of their male offspring. Ex: red-green colorblindness. Retinitis pigmentosa.
35
X linked ocular disorders
Red-green color blindness. Congenital stationary night blindness. Retinitis pigmentosa Choroideremia- nyctalopia
36
Mitochondrial inheritance disorders
Only passed down by mothers. Disorders appear in every generation of a family Males = females, but expressivity can change between males and females. Usually affects males more. Ex: lebers Hereditary optic neuropathy (Apoptosis of RGC)
37
Chromosomal disorders. When do they occur?
Reflect events that occur at the time of meiosis as gametes are being formed. Ex: Nondisjunction or breakage of chromosome with loss or translocation of genetic material (translocation/deletion)
38
Two types of nondisjunction
Results in unequal separation of chromosomes during meiosis (chromosomal disorders) or mitosis (mosaicism). Manifestations will be different for each.
39
Results of nondisjunction
Results in 22 or 24 chromosomes in the egg or sperm. Turner syndrome: 22 + 23 = 45 chr Down Syndrome: 24 + 23 = 47 chr
40
Karyotype
Family photograph of chromosomes
41
Ocular manifestations of down syndrome
Epicanthic folds Brushfield spots (circle around iris) Refractive error Early onset cataracts
42
Klinefelter's syndrome
Nondisjunction of sex chromosome (23) Person ends up with 47 chromosomes (XXY)
43
How to diagnose Klinefelters syndrome
One barr body (condensation of one of the X chromosomes)
44
Signs and symptoms of Klinefelters
XXY. Phenotypical male. Hypogonadism. Female secondary sex characteristics at puberty.
45
Turner Syndrome
Non-disjunction of 23 45, X karyotype.
46
Most common monosomy
Turner syndrome. 45, X
47
Signs and symptoms of X
Short stature, shield chest, webbed neck, reproductive sterile. Heart and kidney defects.
48
Ocular manifestations of Turners syndrome
45, X | Many binocular vision problems.
49
Chromosomal translocation
Transfer of chromosome parts between non-homologous chromosomes.
50
Robertson translocation
Unbalanced chromosomal translocation. Unequal parts of chromosomes are exchanged. Additional cause of down syndrome.
51
Example of chromosomal deletion
Cri du chat syndrome. Loss of the short arm of Chromosome 5.
52
Two chromosomal deletions that affect the eye
WAGR (chr 11- aniridia) | Retinoblastoma (chr 13 deletion) Due to loss of tumor suppressor gene.
53
Ocular manifestations of Cri-du-chat syndrome
Hypertelorism- broadly spaced eyes Epicanthal folds Down slanting palpebral fissures Strabismus
54
Hypertelorism
Broadly spaced eyes. Seen in Cri du chat syndrome.
55
Mosaicism
Could be due to non-disjunction or point mutations during mitosis. After fertilization, but early in development. Ex; heterochromia.
56
Polygenic/multigenic disordres
Disease incidence is affected by multiple genes in addition to lifestyle and environmental factors.