Module 2 Flashcards

1
Q

1 micrometer (μm) =

A

10^-6 m

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2
Q

1 nanometer (nm) =

A

10^-9 m

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3
Q

What makes a good microscope

A

adequate magnifying power
high resolving power
serves your purpose
provides good contrast

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4
Q

two main types of microscopes

A

light and electron

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5
Q

microscope that use light waves and mirrors

A

light microscopes

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6
Q

types of light microscopes

A

simple, compound/complex, bright-field, dark-field, phase contrast, differential interference contrast, fluorescence, confocal, two-photon

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7
Q
  • use electron beams as energy source
  • has higher magnification and resolving power
  • for objects smaller than 0.2 mm in diameter
  • in vacuum
  • should have mo water when used
A

electron microscope

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8
Q
  • objects under study are darker
  • microscopic field is brightly lit
  • gross morphology
  • can be used stained or unstained
A

BRIGHT FIELD

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9
Q
  • microscopic field is dark
  • objects under study are luminous
  • for specimens that are:
    • invisible in the ordinary light microscope
    • cannot be stained by standard methods
    • distorted by staining
  • has opaque disc that blocks light
A

DARK FIELD

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10
Q
  • principle is based on variations in the refractive indices
    (measure of bending or refracting of a beam of light on
    entering a denser medium)
  • not necessary to fix or stain cells
  • detailed examination of internal structure
A

PHASE CONTRAST

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11
Q
  • principle is based on variations in the refractive indices
  • advantage: no diffraction halo associated with phase contrast
  • disadvantage: the three-dimensional appearance may not represent reality
A

DIFFERENTIAL INTERFERENCE CONTRAST

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12
Q
  • makes use of fluorochromes
  • visualizes specimens that fluoresce
  • detection of immunological reactions
  • can be direct (primary antibody fluorochromes) and indirect (secondary antibody is attached to primary antibody)
A

FLUORESCENCE

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13
Q
  • useful for thick specimens like biofilms
  • used to visualize structures
A

CONFOCAL

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14
Q
  • useful for examining living cells within intact tissues
  • currently limited to advanced clinical and research laboratories
A

TWO-PHOTON

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15
Q

types of electron microscopes

A

TRANSMISSION ELECTRON MICROSCOPE (TEM),
SCANNING ELECTRON MICROSCOPE (SEM),
SCANNING TUNNELING MICROSCOPE (STM),
ATOMIC FORCE MICROSCOPE (AFM)

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16
Q
  • ultrastructure in thin section of the cells
  • can project images in a much higher resolution—up to the
    atomic level of thinner objects
  • examine viruses
  • cells should be killed
  • 100,000 X and above magnification
A

TRANSMISSION ELECTRON MICROSCOPE (TEM)

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17
Q
  • surface features of viruses and cells
  • reveals a 3-D image
A

SCANNING ELECTRON MICROSCOPE (SEM)

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18
Q

for observing materials like Pure Gold Surface

A

SCANNING TUNNELING MICROSCOPE (STM)

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19
Q

for observing Nanocellulose

A

ATOMIC FORCE MICROSCOPE (AFM)

20
Q

advantages of examining organisms in living or natural state

A
  • observation of unaltered/undistorted characteristics
  • cellular processes can be studied
  • motility can be observed
  • simple to prepare
21
Q

disadvantages of examining organisms in living or natural state

A
  • refractive index of cells almost similar to that of water
22
Q

advantages of examining organisms in stained organisms

A
  • provides contrast
  • slides can be preserved
  • specimens are killed
23
Q

disadvantages of examining organisms in stained organisms

A
  • more complicated and tedious to prepare
  • expensive
24
Q

Three basic steps in staining microorganisms:

A
  1. Smear Preparation
  2. Fixation
  3. Staining
25
a thin, dry film of microorganisms
Smear
26
STEP 1: Smear Preparation
spread culture in thin film over slide -> dry in air
27
purpose of fixation
* kills the cells * makes the cells sticky * increases apparent diameter of cells
28
types of fixation
1. Heat Fixation 2. Chemical Fixation
29
* fixation through direct flame or steam
Heat Fixation
30
* fixation using alcohols
Chemical Fixation
31
* application of biological dyes
Staining
32
* organic compounds carrying chromophoric ions * make cell’s internal and external structures more visible with the increased contrast with the background
Dyes (Stains)
33
Types of Stains:
1. Basic or Positively-Charged Dye 2. Acidic or Negatively-Charged Dye 3. Neutral
34
staining which only uses one dye
SIMPLE STAINING
35
types of simple staining
Positive / Direct Negative / Indirect
36
* cells are the same color as the dye * crystal violet, malachite green, methylene blue, safranin
Positive / Direct
37
* cells are colorless or luminous * acid fuchsin, eosin, rose bengal, india ink, nigrosin
Negative / Indirect
38
* two or more dyes and/or reagents are used
DIFFERENTIAL STAINING
39
examples of DIFFERENTIAL STAINING
Gram Staining Acid-Fast Staining
40
* used in finding gram-positive / gram-negative
Gram Staining
41
* used in diagnosis of tuberculosis
Acid-Fast Staining
42
Gram staining process
1: crystal violet (primary stain) -> stain cells turn purple or blue 2: iodine (mordant makes dye less soluble so it adheres to cell walls) -> cells remain blue or purple 3: alcohol (decolorizer washes away stain from gram-negative cell wall) -> gram positive remains the same color, gram negative turns colorless 4: safranin (counterstain allows dye adherence to gram-negative cells) -> gram positive remains the same color, gram negative turns pink/ red
43
methods used in Acid-Fast Staining
* Ziehl-Neelsen Technique * Kinyoun Technique
44
types of staining
simple staining differential staining structural staining
45
* two or more dyes and/or reagents to emphasize structures
STRUCTURAL STAINING
46
structural staining is used for:
* Capsules * Endospores * Flagella * Storage Granules