Nucleotides Flashcards

(47 cards)

1
Q

Contains D ribose or 2 deoxy D ribose
Linked ro N1 of a pyrimidine
Or N-9 of purine
By B-N-glycosidic bond

A

Nucleoside

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2
Q

In nucleotides, the phosphoryl group is usually attached to C-5 of the

A

Pentose

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3
Q

Polynucleotides are written in what direction

A

5’ to 3’

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4
Q

Rate limitjng enzyme of purine synthesis

A

PRPP glutamyl amidotransferase

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5
Q

Rate limiting enzyme of pyrimidine synthesis

A

Carbamoyl phosohate II

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6
Q

Donors of atoms in purine synthesis

A

GAC GN

Glutamine
Aspartate
Carbon dioxide

Glycine
N10-formyltetrahydrofolate

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7
Q

Donors of atoms in pyrimidine synthesis

A

GAC

Glutamine
Aspartate
Carbon dioxide

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8
Q

Sequence of steps in purine synthesis

A

Ribose 5P —-> purine ring construction

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9
Q

Sequence of steps in pyrimidine synthesis

A

Pyrimidine ring formation —-> attachment to ribose 5phosphate

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10
Q

Parent molecule purine synthesis

A

Inosine monophosphate

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11
Q

Parent molecule pyrimidine synthesis

A

Orotidine monophosphate

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12
Q

Products of of purine synthesis (2)

A

GMP (requires ATP)

AMP (requires GTP)

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13
Q

Products of PYR synthesis (2)

A

CTP, TMP, UDP

UMP—> UTP —> CTP

UMP —-ribonucleotide reductase —> dUMP
dUMP—-thymidylate synthase—> TMP

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14
Q

Enzyme that activates r5p

A

PRPP syntetase

R5P—>5-PRPP

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15
Q

Energy requirement for prpp reaction

A

ATP to AMP

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16
Q

Donor of R5P of nucleotides, whether synthesized de novo or through salvage pathways

A

PRPP

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17
Q

Inhibits PRPP synthetase

A

ADP

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18
Q

Inhibits PRPP —-> 5 phosphoribosylamine

Enzyme glutamine PRPP amidotransferase

A

AMP IMP

GMP

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19
Q

Pyrimidine synthesis

Multisubunit enzyme that reduces nucleoside diphosohates to their deoxy forms

A

Ribinucleotide reductase

20
Q

Ribinucleotide reductase facilitate redox reactions that require ____ and ____

A

Thioredoxin

NADPH

21
Q

Pyr synthesis

Enzyme that converts dUMP to thymine

A

Thymidilate synthase

22
Q

Cofactor for thymidilate synthase in pyr synthesis

A

N5, N10 methylene tetrahydrofolate

Inhibited by 5-fluorouracil

23
Q

Purine/pyrimidine

Ring cannot be cleaved in human cells

24
Q

Purine/pyrimidine

Ring can be opened and degraded ro water soluble products

25
Product of purine degradatiom
Uric acid
26
Product of pyr degradation (2)
Beta alanine (precursor for acetyl CoA) Beta aminoisobutyrate (precursor for succinyl CoA)
27
Disease associated with accumulation of purine, pyrimidine
Gout | Orotic aciduria, respectively
28
Conversion of purines, ribonucleotides, and their deoxyribonucleotides to mononucleotides
Salvage purine pathway
29
Requires LESSenergy than de novo synthesis
Salvage pathway
30
2 irreversible enzymes in salvage pathway of purine
APRT and HGPRT Adenine phosphoribosyltransferase Hypoxanthine guanine phosphoribosyltransferase
31
Source of ribose 5 phosphate in purine salvage pathway
PRPP
32
Drugs that inhibit nucleotide metabolism | Inhibits xanthine oxidase
Allopurinol
33
Drugs that inhibit nucleotide metabolism Structural analog of PABA Competitively inhibits dihydripteroate synthase (Conversion of PABA to folate)
Sulfonamides
34
Drugs that inhibit nucleotide metabolism Stuctural analog of folate Slectively inhibits bacterial dihydrofolate reductase (Conversion of THF from folate)
Trimethoprim
35
Drugs that inhibit nucleotide metabolism Metbolically converted to 5 FdUMP which inhibits thymidilate synthase (DTMP to dUMP)
5 FU
36
Inhibits dihydrofolate reductase which reduces the tetrahydrofolate supply for the synthesis of thymine
Methotrexate
37
Drugs that inhibit nucleotide metabolism Reversible inhibitor of IMP dehydrogenase Depriving T and B lymphocytes of nucleic acids (Fglu rxns)
Mycophenolate
38
Enzyme deficiency | Lesch nyhan
HGPRT (inc PRPP and uric acid)
39
Enzyme deficiency | SCID
Adenosince deaminase | Inc dATP inhibits ribonucleotide synthase
40
Enzyme deficiency | Von Gierke
Glucose 6 phosphatase | Inc ribose 5 phosphate
41
Enzyme deficiency | Orotic aciduria
Orotidine phosphate decarboxylase or | Orotate phosphoribosyl transferase
42
Enzyme deficiency | Beta hydroxybutyric aciduria
Dihydropyridine dehydrigenase
43
X linked | Gout, self-mutilation, mental retardation
Lesch nyhan
44
Lymphocytipenia Death before age because of overwhelming infection Treat with BM transplant Gene therapy
SCID
45
Purine overproduction and hyperuricemia
Von Gierke
46
Poor growth Megaloblastic anemia Orotate in urine Treat with uridine
Orotic aciduria
47
Combined uraciluria-thyminuria | Impaired formation of beta alanine and of bet aminoisobutyrate
Beta hydroxybutyric aciduria