Steve Martin's Manic Micro Material Flashcards

(506 cards)

1
Q

Peptidoglycan

A

Gives rigid support, protects against osmotic pressure

sugar backbone with peptide side chains cross lnked by transpeptidase.

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2
Q

Cell wall/Cell membrane of gram positive bacteria

A

Major surface antigen
peptidoglycan for support
lipoteichoic acid induces TNF and IL-1

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3
Q

Outer membrane of gram negatives

A

Site of endotoxin (lipopolysaccharide (LPS))
major surface antigen
Lipid A induces TNF and IL-1
O polysaccharide is the atnigen

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4
Q

Ribosome subunits of bacteria

A

Have 30s and 50s subunits

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5
Q

Giemsa Stains

A

Chlamydia, Borrelia, Rickettsiae, Trypanosomes, Plasmodium

clams, ticks, worms, and mosquitos

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6
Q

PAS periodic acid-Schiff

A

Stains glycogen, mucopolysaccharides: used to diagnose Whipple disease
PAS the Sugar

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7
Q

Ziehl-Neelsen (Carbol Fuchsin)

A

Acid fast organisms Nocardia and mycobacterium

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8
Q

India Ink

A

Cryptococcus neformans (mucicarmine can also be used to stain thick polysaccharide capsule red)

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9
Q

Silver Stain

A

Fungi luke pneyocystis
Legionella
Helicobacter pylori

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10
Q

Culture for H. Influenza

A

Chocolate agar with factors V (NAD+) and X (hematin)

When you have the flu, you go to the five (V) and dime (X) to buy chocolate

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11
Q

Culture for N. Gonorrhoeae and N meningitidis

A

Thayer Martin, AKA VPN media
Vanco to inhibit gram +
Polymixin to inhibit gram negative except neisseria
Nystatin inhibits fungi

to connect to neisseria, please use your VPN client

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12
Q

Culture for B pertussis

A

Bordet-Gengou agar

also Regan-lowe

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13
Q

Culture for C Diptheria

A

Tellurite agar loffler medium

country tom has a DIP in and he says “I’ll tell you right!”

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14
Q

Culture for M tuberculosis

A

Lowenstein-Jensen agar

tuberculowenstein-jensen

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15
Q

Culture for M pneumoniae

A

Eaton agar, requires cholesterol

mycoplasma pneumonia eats away your lungs

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16
Q

Culture for Lactose-fermenting enterics

A

Pink colonies on MacConkey agar (fermentation produces acid, turning colony pink)
E Coli is grown on eosin-methylene blue (EMB) agar as colonies with green metallic sheen

Citrobacter, Klebsiella,
E. coli, Enterobacter, and Serratia

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17
Q

Culture for Legionaella

A

Charcoal yeast extract agar buffered with cysteine and iron

A french legionnaire wears a silver helmet, an iron dagger, has a charcoal bonfire and is not a sissy (cysteine)

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18
Q

Culture for fungi

A

Sabouraud agar
Sab is a fun guy!
Sab is also cryptic when he goes to india……. (india ink used for cryptococcus neoformans)

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19
Q

Obligate Aerobes

A

Use O2 dependent system to generate ATp
Nocardia, Pseudomonas, MycoBacterium tuberculosis

Know Pseudomonas Must Breath

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20
Q

Obligate anaerobes

A

Actinomyces, Fusobacterium, Bacteroides, and Clostridium

“Can’t Breath or Act if you are Fused to the Back of the Closet”

Lack catalase and or superoxide dismutase therefore they are susceptible to oxidative damage
Generally foul smelling due to short fatty acids
are difficult to culture
produce gas in tissue (CO2 and H+)

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21
Q

Obligate intracellular bugs

A

Rickettsia, Chlamydia, Coxiella
Can’t make own ATP
“Rick is Clammy and Cocky inside”

the rick from rick and morty

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22
Q

Facultative intracellular

A

Salmonella, Neisseria, Brucella, Mycobacterium, Listeria, Francisella, Legionella, Yersinia pestis
“Some Nasty Bugs May Live FacultiveLY”

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23
Q

Encapsulated Bacteria

A

“SHiNE SKiS”
Strep pneumoniae
Haemophilus influenzae type B, Neisseria meningitidis, Escherichia coli, Salmonella, Klebsiella pneumoniae, and group B Strep
Capsules have antiphagocytic virulence factors
Capsule + protein conjugate serves as an atigen in vaccines
Bugs are opsonized, cleared by spleen
No spleen, big risk of infection

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24
Q

Catalase-Positive Bugs

A

Catalase degrades H202 before it can be converted to microbicidal products by the enzyme myeloperozidase
People with chronic granulomatous disease (NADPH ozidase deficiency) have recurrent infections with catalase organisms
Pseudomonas, Listeria, Aspergillus, Candida, E. coli, S. Aureus, Serratia
“you need PLACESS for your CATs”

cats can serrate your face

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25
Encapsulated Bacteria Vaccines
``` Some vaccines have polysaccharide capsule antigens that are conjugated to a carrier protein, enhancing immunogenicity by promoting T-cell activation and subsequent class switching A polysaccharide antigen alone cannot be present to T-Cells so you won't get class switching ```
26
Urease-positive bugs
CHuck norris hates PUNKSS | Cryptococcus, H pylori, Proteus, Ureaplasma, Norcardia, Klebsiella, S. epidermidis, S saprophyticus
27
Pigment producing bacteria
Actinomyces isrelii makes yellow sulfur granules which are composed of filaments of bacteria (israel has yellow sand) S. aureus makes yellow pigment (aureus latin for gold) Pseudomonas aeruginosa makes blue green pigment (aerugula is green) Serrratia marcescens makes a red pigment - after a cat serrates your face you bleed red
28
Protein A bacterial virulence factor
binds Fc region of IgG prevents opsonization and phagocytosis Expressed on S aureus
29
IgA protease bacterial virulence factor
Enzyme that cleaves IgA secreted by S. pneumoniae, H. influenza type B, Neisseria in order to colonize respiratory mucosa SHiN
30
M protein bacterial virulence factor
Helps prevent phagocytosis Expressed by group A streptococci meromysin in heart
31
Characteristics of Exotoxins
``` Secreted from cell Polypeptide Highly toxic induces high antitoxin antibody response toxoids used as vaccines destroyed rapidly at 60 degrees C examples: tetanus, botulism, diphtheria ```
32
Characteristics of Endotoxin
``` secreted from cell membrane of gram negative cells is a lipopolysaccharide low level of toxicity, poorly antigenic fever, shock (hypotension), DIC Induces TNF, IL-1, IL-6 Stable at 100 degrees C No antitoxin vaccines Example: meningococcoemia, sepsis by gram negative rods ```
33
Corynebacterium diphtheriae: toxins
releases diphtheria toxin, inactivating elongation factor EF-2 Causes pharyngitis with pseudomembranes (fibrinous) in throat and severe lymphadenopathy positive ELEK test LICK test for blue and red corn chips
34
Pseudomonas aeruginoase: toxins
realeases Exotoxin A, inactivating elongation factor EF-2 | Causes host cell death
35
Shigella spp: toxins
releases shiga toxin causing inactivation of 60s ribosome by removing adenine from rRNA causes GI mucosal damage leading to dysentery, also enhances cytokine release causing hemolytic-uremic syndrome
36
Enterohemorrhagic E coli: toxin
releases Shiga like Toxin causing inactivation of 60s ribosome by removing adenine from rRNA SLT enhances cytokine release causing hemolytic-uremic syndrome, but does not invade host cells
37
Enterotoxigenic E. coli: toxin
Heat labile toxin: overactivates cAMP causing increase Cl secretion in gut and efflux Heat stabile toxin: overactivates cGMP causing decreased reaborption of NaCl and H2O in gut Both cause watery diarrhea "Liable in the Air, Stable on the Ground"
38
Bacillus anthracis: toxin
Edema factor toxin mimics the cAMP enzyme likely responsible for characteristic edematous borders of black eschar in cutaneous anthrax
39
vibrio cholerae: toxin
cholerae toxin overactivates cAMP by permanently activating Gs leading to increase Cl secretion with H2O following Voluminous "rice-water" diarrhea Vibrate the G-Spot Vibrio Gs
40
Bordetella pertussis: toxin
Pertussis toxin overactivates cAMP by disabling Gi, impairing phagocytosis to permit survival of microbe Whooping cough: child coughs on expiration and whoops on inspiration
41
Clostridium tetani: toxin
tetanospasmin toxin protease that cleave SNARE proteins required for neurotransmitter release Symptoms: spasticity, rusis sardonicus, lockjaw, prevents release of inhibitory neurotransmitters (GABA, glycine) from Renshaw cells in spinal cord get tetanus from a rusty wrench-saw (Renshaw)
42
Clostridium botulinum: toxin
Botulinum toxin Proteases that cleave SNARE proteins required for neurotransmitter release Flaccid paralysis, floppy baby toxin prevents release of stimulatory ACh signals at neuromuscular junctions leading to flaccid paralysis
43
Clostridium perfringens: toxin
Alpha toxin phospholipase (lecithinase) that degrades tissue and cell membranes degradation of phospholipids leading to myonecrosis (gas gangrene) and hemolysis (double zone of hemolysis on blood agar)
44
Streptococcus pyogenes: toxin
streptolysin O Protein that degrades cell membrane Lyses RBCs, contributes to Beta-hemolysis, host antibodies against toxin (ASO) used to diagnose rheumatic fever (do not confuse with immune complexes of poststreptococcal glomerulonephritis) Exotoxin A bring MHC II and TCR in proximity to outside of antigen binding site to cause overwhelming release of IFN-gamma and IL-2 leading to shock Toxic shock syndrome: fever, rash, shock
45
Staphococcus aureus: toxin
Toxic shock syndrome toxin (TSST-1) bring MHC II and TCR in proximity to outside of antigen binding site to cause overqhelming release of IFN-gamma and IL-2 leading to shock also protein A binds Fc portion of IgG
46
Bacterial Transformation
Ability to take up naked DNA (i.e. from cell lysis) from environment (aka competence) a feature of many bacteria any DNA can be used
47
Bacterial transformation: Hfr x F-
High frequency recombination (Hfr) replication of incorporated plasmid DNA may include flanking chromosomal genes transfer of plasmid and chromosomal genes
48
Transposition
segment of DNA (e.g. transposon) that can "jump" from one location to another, can transfer genes from plasmid to chromosome and vice versa when excision occurs, may include some flanking chromosomal DNA which can be incorporated into a plasmid and transferred to another bacterium examples include antibiotic resistance genes on R plasmid
49
Transduction: Generalized
A packaging event lytic phage infects bacterium, leading to cleavage of bacterial DNA Parts of bacterial chromosomal DNA may become packaged in viral capsid phage infects another bacterium, transferring these genes
50
Transduction: specialized
an excision event lysogenic phage infects bacterium viral DNA incorporates into bacterial chromosome when phage DNA is excised, flanking bacterial genes may be excised with it DNA is packaged into phage viral capsid phage infects another bacterium, transferring these genes
51
alpha hemolytic bacteria
Form green ring around colonies on blood agar Streptococcus pneumoniae viridans streptococci
52
Streptococcus pneumoniae: Classification
``` Capsule Optochin sensitive Bile soluble Catalase negative alpha hemolytic gram positive Cocci diplococci lancet shaped IgA protease natural transformer ```
53
Viridans Streptococci: Classification
``` No capsule optochin resistant bile insoluble alpha hemolytic Gram positive cocci Catalase negative ```
54
Strep pyogenes: classification
``` Group A Bacitracin sensitive Beta hemolytic catalase negative gram positive cocci ```
55
Strep agalactiae: classification
``` Group B Bacitracin resistant gram positive cocci in chains Beta hemolytic catalase negative CAMP test positive ```
56
Enterococcus: classification
``` Group D gram positive cocci Catalase negative gamma hemolytic Growth in bile and NaCl ```
57
Staph saprophyticus: classification
novobiocin resistant Gram positive cocci catalase positive coagulase negative
58
Staph epidermidis: classification
``` Novobiocin sensitive Gram positive cocci catalase negative coagulase negative Makes biofilm(which is why it can adhere to medical implants and cause infections) ```
59
Staph aureus: classification
gram positive cocci catalase positive coagulase positive beta-hemolytic
60
Gram positive rods: classification
``` Clostridium corynebacterium listeria bacillus mycobacterium ```
61
actinomyces: classification
Gram positive branching filaments anaerobe not acid fast
62
nocardia classification
Gram positive branching filaments aerobe mildly acid fast
63
Staphylococcus aureus: Virulence factor, what does the infection cause
Protein A- binds Fc-IgG Inflammatory disease Toxin-mediated disease- toxic shock syndrome (TSST-1), scalded skin syndrome (exfoliative toxin), rapid onset food poisoning (enterotoxins) MRSA- altered penicillin-binding protein makes it resistant
64
Streptococcus pneumoniae: causes what
``` MOPS meningitis Otitis media in kids Pneumonia Sinusitis Rusty sputum (alpha hemolytic) causes sepsis in sickle cell anemia and splenectomy ``` S. pneumoniae MOPS are Most OPtochin Sensitive.
65
What bacteria is likely to be the cause of dental carries
Streptococci mutans
66
What bacteria is likely to cause infection of damaged heart valves
Streptococci sanguinis sanguis=blood makes dextrans which bind to fibrin-platelet aggregates on damaged heart valves
67
Streptococcus pyognenes (group a strep): causes what
``` release pyrogenic exotoxin in scarlet fever rheumatic fever (antibodies against M protein, type II hypersensitivity) acute glomerulonephritis (type III hypersensitivity) ```
68
Strep agalactiae: causes, prevention
B is for babies (group B), shortly after birth babies get symptoms causes pneumonia, meningitis, and sepsis Colonizes vagina Produces CAMP factor which enlarges area of hemolysis cause by strep aureus) Hippurate test positive screen pregnant women and give positive ones intrapartum penicillin prophylaxis
69
Enterococci: causes, facts
normal colonic flora that are penicillin G resistant cause UTI, biliary infections, subacute endocarditis following GI/GU procedures VRE= Vanco resistant enterococci
70
Streptococcus bovis: causes
Colonizes the gut | can cause bacteremia and subacute endocarditis in COLON CANCER
71
Corynebacterium diphtheriae: causes
causes diphtheria via exotoxin encoded by beta prophage Potent exotoxin inhibits protein synthesis via ADP-ribosylation of EF-2 lab diagnosed
72
Bacterial Spores
Spores are highly resistant to heat and chemicals Need to autoclave to kill Have dipicolinic acid in their core If you DIP your COLON in ACID, only the spores will be left (like clostridium)
73
Clostridia botulinum
preformed heat labile toxin that inhibits ACh release at the neuromuscular junction causing botuism Adults ingest the toxin babies ingest the spores in honey causing floppy baby syndrome
74
Clostridia perfringens
produce alpha toxin lecithinase which is a phospholipase can cause myonecrosis (gas gangrene) and hemolysis
75
Clostridia difficle
Produces 2 toxins Toxin A, enterotoxin, binds brush border of gut Toxin B, cytotoxin, cases cytoskeletal disruption via actin depolymerization causing pseudomembranous colitis leading to diarrhea usually secondary to antibiotic use. especially clindmycin or ampicillin diagnose by detecting one of the toxins in stool
76
Anthrax
caused by bacillus anthracis gram positive spore forming rod only bacterium with a *polypeptide capsule* (contains D-glutamate)
77
Cutaneous anthrax
boil-like lesion ulcer with black eschar (painless and necrotic) uncommon for it to progress to bacteremia and death
78
Pulmonary anthrax
inhalation of spores | flu-like symptoms that progress to fever, pulmonary hemorrhage, mediastinitis and shock
79
Woolsorters' disease
inhalation of anthrax spores from contaminated wool......weird
80
Bacillus cereus
causes food poisoning spores survive cooking rice, keeping rice warm results in germination and enterotoxin formation emetic type usually seen with rice and pasta (nausea and vomiting within 1 to 5 hrs, caused by cerculide, a preformed toxin) Diarrheal type causes watery, nonbloody diarrhea and GI pain within 8 to 18 hrs Cereus - cereal Rice - warm rice krispies cereal
81
Listeria monocytogenes
Facultative intracellular microbe ingestion of unpasteurized dairy products, deli meats, transplacental transmission, or vaginal during birth form "rocket tails" from actin polymerization, help it move, tumbling motility *Only gram positive to produce LPS* can cause amnionitis, septicemia, spontaneous abortion, neonatal meningitis goes away in adults usually ampicillin in kids, immunocompromised, elderly
82
Actinomyces
gram positive anaerobe long, branching filaments resembling fungi not acid fast normal oral flora causes oral/facial abscesses that drain through sinus tracts, forms yellow sulfur granules treat with penicillin
83
Nocardia
Gram positive aerobe weakly acid fast long, branching filaments resembling fungi found in soil causes pulmonary infections in immune compromised and cutaneous infections after trauma in normal patients treat with sulfonamides
84
Primary TB infection
Ghon complex | usually in mid zone of lung
85
Secondary TB infection what is it called when it invades the vertebral body
fibrocaseous cavitary lesion usually in upper lobe pott disease when in the vertibrae
86
Mycobacteria
acid fast M. tuberculosis M. kansasii (pulmonary TB-like symptoms) M. avium (intracellular, causes disseminated non-TB disease in AIDS patients), prophylactic treatment with azithromycin
87
TB symptoms, and virulence
fever, night sweats, weight loss, hemoptysis cord factor in virulent strains inhibits macrophage maturation and induces release of TNF-alpha. sulfatides inhibit phagolysosomal fusion
88
Leprosy
Caused by mycobacterium leprae 2 forms lepromatous and tuberculoid
89
mycobacterium leprae
causes leprosy acid fast bacillus likes cool temperatures (infects skin, superficial nerves) can't be grown in vitro reservoir in US is in armadillos dapsone, rifampin and clofazimine for 2 to 5 years
90
Lepromatous leprosy
presents diffusely over skin with leonine facies, no granulomas, communicable low cell-mediated immunity with humor Th2 response
91
Tuberculoid leprosy
limited to a few hypoesthetic, hairless skin plaques, go after superficial surface and nerves, slow growth high cell-mediated immunity with Th1 type immune response, will see granulomas on biopsy dapsone and rifampin treats in 6 months
92
M. Tuberculosis
Acid fast bacillus produces niacin mycolic acids make it resistant to gram staining Auramine- rhodamine stain of sputum will be positive
93
Campylobacter jejuni: classification
``` Gram negative oxidase positive comma shaped grows at 42 degrees polar flagella microaerophilic ```
94
Vibrio cholerae: classification
Gram negative oxidase positive comma shaped grows in alkaline media
95
Helicobacter pylori: classification
Gram negative oxidase positive comma shaped produces urease
96
Haemophilus influenzae: classification
gram negative coccoid rod require factors V and X
97
Pasteurella
gram negative rod coccoid rods from animal bites
98
Brucella
Gram negative coccoid rod causes brucellosis
99
Bordetella pertussis: classification
gram negative | coccoid rod
100
N. meningitidis: classification
gram negative diplococci maltose fermenter
101
N. gonorrhoeae
``` gram negative diplococci maltose nonfermenter Can be grown on chocolate agar, but not on blood agar Pili are its pathogenic feature ```
102
Klebsiella: classification
gram negative rod | fast lactose fermenter
103
E. coli: classification
gram negative rod fast lactose fermenter produces beta galactosidase which breaks down lactose into glucose and galactose
104
Enterobacter: classification
gram negative rod | fast lactose fermenter
105
Citrobacter: classification
gram negative rod | slow lactose fermenter
106
Serratia: classification
gram negative rod | slow lactose fermenter
107
Shigella: classification
Gram negative rod lactose non fermenter oxidase negative
108
Salmonella: classification
Gram negative rod lactose non fermenter oxidase negative
109
Proteus: classification
Gram negative rod lactose non fermenter oxidase negative
110
Yersinia: classification
Gram negative rod lactose non fermenter oxidase negative
111
Pseudomonas: classification
Gram negative rod non fermenter Oxidase positive
112
Lactose fermenting enteric bacteria
Lactose is KEE Test with macConKEE'S agar, turns pink from acid Citrobacter, Klebsiella, E. coli, Enterobacter, and Serratia EMB agar- lactose fermenters grow as purple/black colonies E. coli grows purple with green sheen
113
Penicillin and gram negative bugs
gram negative bacilli are resistant to penicillin G but may be susceptible to penicillin derivatives such as ampicillin or amoxicillin gram negative outer membrane blocks penicillin and vanco entry
114
Neisseria Gonococci
Gram negative diplococci (only circular gram negative) ferments glucose Produces IgA proteases Has pili Mostly found intracellularly in neutrophils but not an intracellular organism No capsule No maltose fermentation No vaccine due to rapid antigenic variation of pilus proteins Sexually transmitted Causes gonorrhea, septic arthritis, neonatal conjunctivitis, pelvic inflammatory disease, Fitz-hugh curtis syndrome Condoms prevent transmission treat with ceftriaxone (add azithromycin or doxy for possible chlamydia co infection) Capsule is immunogenic
115
Neisseria Meningococci
``` Gram negative diplococci ferments glucose Produces IgA proteases Polysaccharide capsule maltose fermentation Vaccine but not for type B Transmitted by respiratory and oral secretions Causes meningiococcemia and meningitis, waterhouse-Friderichsen syndrome prophylaxis with rifampin, ciprofloxacin, or ceftriaxone Treat with ceftriaxone or penicillin G Type B capsule is not immunogenic GIVE AWAY MENINGITIS IS PETECHIAL RASH! ```
116
Haemophilus influenzae
Small gram negative coccobacillary rod aerosol transmission Produces IgA proteases culture on chocolate agar with Nad (V) and hematin (X) or with staph aureus which provides factor X haEMOPhilus causes: Epiglottitis, Meningitis, Otitis media, Pneumonia Treat mucosal with amoxicillin +/- clavulanate treat meningitis with ceftriaxone rifampin for prophylaxis
117
X-ray of H. influenzae epiglottitis
thumbprint sign- thickening of epiglottis on lateral neck radiograph
118
Legionella pneumophila
``` Gram negative rod, stains poorly-use silver stain Grow on charcoal yeast extract with iron and cysteine clinically detected by antigen in urine aerosol transmission from water no person to person transmission treat with macrolide or quinolone labs show hyponatremia pontiac fever= mild flu like symptoms ```
119
Legionnaires disease
severe pneumonia fever GI CNS symptoms
120
Pseudomonas aeruginosa
Aerobic gram negative rod non lactose fermenting oxidase positive produces pyocyanin (blue green pigment) grape like odor from a water source produces endotoxin (fever, shock) and exotoxin A (inactivates EF-2) PSEUDOmonas is associated with burn infections, Pneumonia (especially cystic fibrosis), Sepsis, External otitis, UTI, Drug use, and Diabetic Osteomyelitis, and hot tub folliculitis treat with aminoglycosides plus extended spectrum penicillin (piperacillin, ticarcillin, cefepime, imipenen, meropenum)
121
Ecthyma gangrenosum
rapidly progressive necrotic cutaneous lesions caused by pseudomonas bacteremia usually in immune compromised patients treat with aminoglycosides plus extended spectrum penicillin (piperacillin, ticarcillin, cefepime, imipenen, meropenum)
122
E coli
Gram negativem oxidase negative lactose fermenting rod grows pink on MacConkey agar virulence factors: fimbriae- cystitis and pyelonephritis, K capsule- pneumonia, neonatal meningitis, LPS endotoxin- septic shock
123
Strain EIEC of E coli
Microbe invades intestinal mucosa and causes necrosis and inflammation clinically similar to shigella Invasive; dysentery
124
Strain ETEC of E coli
produces heat-labile and heat-stabile enterToxins. no inflammation or invasion Travelers' diarrhea (watery)
125
Strain EPEC of E coli
no toxin produced adheres to apical surface, flattens villi, prevents absorption Diarrhea usually in Peds patients
126
strain EHEC of E coli
O157:H7 is the most common serotype produces Shiga-like toxin causing hemolytic-uremic syndorme (triad of anemia, thrombocyopenia, acute renal failure) also called STEC (shiga toxin producing E coli) Microthrombi form on endothelium damaged by toxin leading to mechanical hemolysis (schistocytes) and decreased renal blood flow; microthrombi consume platelets leading to thrombocytopenia Dysentery (toxin alone causes necrosis and inflammation) Does not ferment sorbitol (which other E coli do)
127
Klebsiella
Gram negative, oxidase negative, bacillus, fast lactose fermenting, urease positive MacConkeys agar an intestinal flora that causes lobar pneumonia in alcoholics and diabetics when aspirated very mucoid, abundant polysaccharide capsules red currant jelly sputum, x ray shows lobar cavitation nosocomial UTIs 4 A's Aspiration pneumonia, Abscess in lungs and liver, Alcoholics, di-A-betics treat with 3rd gen cephalosporin +/- aminoglycoside
128
Salmonella
``` has flagella can disseminate hematogenously have animal reservoirs produces hydrogen sulfide antibiotics may prolong fecal excretion of organism invades intestinal mucosa and causes a monocytic response can cause blood diarrhea does not ferment lactose ```
129
Shigella
no flagella cell to cell transmission no hematogenous spread only reservoirs are humans and primates does not produce hydrogen sulfide antibiotics shorten duration of fecal excretion of organism invades intestinal mucosa and causes PMN infiltration often causes blood diarrhea does not ferment lactose
130
Salmonella typhi
Causes typhoid fever found only in humans characterized by rose spots on the abdomen, fever, headache, and diarrhea can remain in gallbladder and cause a carrier state
131
Neonates with meningitis: what bugs are you thinking
Group B strep (agalactae) E coli Listeria monocytogenes
132
Campylobacter jejuni
major cause of bloody diarrhea, especially in kids fecal oral transmission through foods (pork, meat, unpasteurized milk) Comma or S shaped oxidase positive, grows at 42 Celcius Look for RBCs and WBCs in stool (invasive bug causing immune response and bleeding) common antecedent to Guillain-Barre syndrome and reactive arthritis
133
Vibrio cholerae
produces profuse rice-water diarrhea via enterotoxin that permanently activates Gs, increasing cAMP comma shaped, oxidase positive, grown in alkaline media endemic to developing countries oral rehydration necessary
134
Yersinia enterocoliticia
Usually transmitted from pet feces, contaminated milk, or pork causes mesenteric adenitis that can MIMIC Crohns disease or appendicitis (find micro abscesses in lymph nodes when they think they have appendicitis
135
Helicobacter pylori
Causes gastritis and peptic ulcers (especially duodenal) risk factor or peptic ulcer, gastric adenocarcinoma, lymphoma curved gram negative rod catalase positive, oxidase positive, urease positive Use urea breath test or urine antigen test to diagnose creates alkaline environment most common initial treatment is triple therapy: proton pump inhibitor, clarithromycin, and amoxicillin or metronidazole
136
Spirochetes
spiral shaped bacteria with axial filaments includes Borrelia (big size), Leptospira, Treponema only borrelia can be visualized using aniline dyes (wright or Giemsa stain) in light microscopy Treponema is visualized by dark-field microscopy
137
Leptospira interrogans
Found in water contaminated with animal urine, causes leptospirosis: fly like symptoms, jaundice, photophobia with conjuctival suffusion (erythema w/o exudate) prevalent among surfers and in tropics (i.e. Hawaii)
138
Weil Disease
Icterohemorrhagic leptospirosis severe form of leptospirosis jaundice, azotemia from liver and kidney dysfunction, fever, hemorrhage, anemia
139
Lyme Disease
Cause by Borrelia burgdorferi, from tick Ixodes Natural reservoir is mice Common in Northeastern US Initial symptoms- erythema chromicum migrans, flu like, +/- facial palsy (bell palsy) Later symptoms- monoarthritis (knee, hips) due to type III hypersensitivity, migratory polyarthritis, AV nodal block, encephalopathy, facial nerve palsy, polyneuropathy treat: doxy, ceftriaxone
140
Ixodes tick transmits
Lymes, Babesia, Anaplasmosis
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Syphilis: caused by, treatment
spirochete Treponema pallidum | treat: penicillin G
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Primary syphilis
Localized disease with painless chancre | use dark field microscopy to visualize treponemes in fluid from chancre
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Secondary syphilis
secondary=systemic bronze colored maculopapular rash (palms and soles); condylomata lata: gray to white flat wart like lesions of the mouth and perineal area; constitutional symptoms serologic testing: VDRL/RPR (nonspecific), confirm diagnosis with FTA-ABS (fluorescent treponenal antibody absorption test) latent syphilis follows (no symptoms, but still positive tests)
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Tertiary syphilis
gumma (chronic granulomas), aortitis (vasa vasorum destruction), neurosyphilis (tabes dorsalis), argyll robertson pupils broad-based ataxia, romberg, charcot joint, stroke without hypertension for neurosyphilis test spinal fluid with VDRL or RPR
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Congenital syphilis
saber shins, saddle nose, CN VIII deafness, Hutchinson teeth, mulberry molars to prevent, treat mom early, placental transmission usually occurs after first trimester
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Argyll Robertson pupil
Pupil constricts with accommodation but is not reactive to light associated with tertiary syphilis "prostitute pupil" accommodates but does not react
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VDRL false positives
VDRL detects nonspecific antibody that reacts with beef cardiolipin inexpensive, widely available test for syphilis sensitive, not specific many false positives due to VDRL: Viruses, Drugs Rheumatic Fever, Lupus/Leprosy
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Jarisch-Herxheimer reaction
Flu-like symptoms after antibiotics are started | due to killed bacteria releasing pyrogens
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Anaplamsa spp.
causes Anaplasmosis, | transmitted via Ixodes ticks (live on deer and mice)
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Bartonella spp.
causes Cat scratch disease, bacillary angiomatosis | get from cat scratches
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Borrelia burgdorferi
causes lyme disease | Transmitted via ixodes tick (live on deer and mice)
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Borrelia recurrentis
causes relapsing fever transmitted via Louse recurrent due to variable surface antigens
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Brucella spp.
causes Brucellosis/undulant fever from unpasteurized dairy faculative intracellular
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Campylobacter
causes bloody diarrhea | from puppies, livestock (fecal oral, or uncooked meat)
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Chlamydophila psittaci
cause psittacosis | from parrots, other birds
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Coxiella burnetii
causes Q fever from Aerosols of cattle/sheep amniotic fluid BURN the cattle and sheep on the bbQ
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Ehrlichia chaffeensis
causes Ehrlichiosis from lone star ticks you get ehrlich from the lone star tick
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Francisella tularensis
gram negative coccobacillus, slow growing, aerobic, require cystine to grow involvement of regional lymph nodes rupture of pustules causes ulcers causes Tularemia from ticks, rabbits, deer fly, dermacentor tick, (think mid western hunter)
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Leptospira spp.
causes leptospirosis get it from animal urine surfers in the leper colony in hawaii surf on a spiral of urine
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Mycobacterium leprae
causes leprosy from humans with lepromatous leprosy or armadillos which are the reservoir in the US (lepromaTWOs is a Th2 response) (tubercuLLOYD christmas - all that ONE in a million talk is Th1)
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Pasteurella multocida
causes cellulitis and osteomyelitis get it form animal bites, cats, dogs animals in a pasture chewing on skin and bones
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Rickettsia prowazekii
causes epidemic typhus get it from Louse epidemic typhus is on the PROWL
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Rickettsia rickettsii
causes rocky mountain spotted fever from dermacentor ticks obligate intracellular (endothelial cells) organisms that need CoA and NAD because they cannot synthesize ATP
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Rickettsia typhi
causes Endemic typhus | from fleas
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Yersinia pestis
``` causes plague from fleas (rats and prairie dogs are reservoirs) ```
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Babesia microti
``` causes babesiosis from the ixodes tick protozoan parasite, intraerythrocytic fever headache and chills splenectomy patients get severe hemolytic anemia ```
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Gardnerella vaginalis
pleomorphic gram variable rod causes vaginosis Presents as a gray vaginal discharge with a fishy smell, nonpainful (vs. vaginitis) associated with sexual activity, but not sexually transmitted Clue cells or vaginal epithelial cells covered with Gardnerella bacteria are visible under the microscope Treat with metronidazole or clindamycin if anaerobic vaginosis (other gram negative bacteria can cause vaginosis) I don’t have a clue why I smell fish in the vagina garden!
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Rocky Mountain spotted fever
Rickettsia rickettsii (lives in endothelial cells), vector is Dermacentor ticks Rash usually at wrists and ankles, spreads to trunk, palm, and soles Classic triad are headache, fever, rash (vasculitis)
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Typhus
Endemic (fleas)- R. typhi Epidemic (human body Louse) R. prowazekii rash starts centrally and spreads out, sparing palms and soles Rickettsii on the wRists, Typhys on the Trunk
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Ehrlichiosis
Ehrlichia: vector is tick monocytes with morulae (berry like inclusions) in cytoplasm ehrlich is from the lone star tick
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Anaplasmosis
Anaplasma, vector is tick, granulocytes with morulae (berry like clusters) in cytoplasm (intracellular): Leukopenia, thrombocytopenia, increased transaminases.
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Q fever
Coxiella burnetti no arthropod vector tick feces and cattle placenta release spores that are inhaled as aerosols. presents as pneumonia Q fever is Queer: no rash, no vector, causative organism can survive outside in its endospore form
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Chlamydiae
Chlamydie in obligate intracellular organism that causes mucosal infections; non gram staining Elementary body (small, dense) is infectious and enters cell via endocytosis; transforms into reticulate body (what you would culture) Reticulate body replicates in cell by fission; reorganizes into elementary body Diagnose in lab: cytoplasmic inclusions seen on Giemsa iodine, or fluorescent antibody- stained smear cell wall lacks muramic acid treat with azithromycin (one time treatment) or doxy reiter's = arthreitis
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Chlamydia trachomatis causes
``` reactive arthritis (reiter syndrome) follicular conjuctivitis, nongonococcal urethritis and PID treat with azithromycin (one time treatment) or doxy ```
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Chlamydia pneumoniae and C. psittaci cause
cause atypical pneumonia; transmitted via aerosol | treat with azithromycin (one time treatment) or doxy
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Chlamydia trachomatis serotypes: A, B, C
Chronic infection, causes blindness due to follicular conjunctivitis in africa ABC= Africa/Blindness/Chronic infection
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Chlamydia trachomatis serotypes: D-K
Urethritis/PID, ectopic pregnancy, neonatal pneumonia (staccate cough, neonatal infection D-K=everything else neonatal disease can be acquired passing through infected birth canal: why we give erythromycin eye drops
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Chlamydia trachomatis serotypes: L1, L2, L3
Lymphogranuloma Venereum: small painful ulcers on genitals leading to swollen, painful inguinal lymph nodes that ulcerate ("buboes") and drain through the skin. treat with doxy
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Mycoplasma pneumoniae
not seen on gram stain, no cell wall membrane has sterols for stability young people in close quarters Causes atypical "walking" pneumonia insidious onset, headache, nonproductive cough, patchy or diffuse interstitial infiltrate X ray looks worse than patient higher titer of cold agglutinins (IgM) grown on Eaton agar treatment: macrolide, doxy, or fluoroquinolone penicillin does not work because it has no cell wall
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Cold agglutinins
IgM: IgM isohemagglutinins that agglutinate autologous erythrocytes at 4 degrees C Strep MG agglutinins: agglutinates streptococcus salivaries termed MG
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Treatment of mycoses
local infection: fluconazole or intraconazole | systemic infection: amphotericin B
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Histoplasmosis
``` Looked for a macrophage filled with histoplasms (the histoplasma is smaller than RBC, 2-5 micrometers) thin capsule, no true cell wall Mississippi and ohio river valleys causes pneumonia *Birds or bat droppings* ```
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Blastomycosis
States east of Mississippi river and central US Causes inflammatory lung disease can disseminate to bones and skin, joints, and genitourinary forms granulomatous nodules Broad based budding (same size as RBCs) Blasto Buds Broadly a dog rolling around in a rotting wood pile
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Coccidiomycosis
Southwestern US, California, Desert areas Causes pneumonia and meningitis can disseminate to bone and skin increased cases after earthquakes (spores go into air, become spherules in lungs) Spherule is much larger than an RBC, filled with endospores Valley fever, desert humps (erythema nodosum), Desert rheumatism (arthralgias)
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Paracoccidioidomycosis
Latin America Budding yeast with captians wheel formation way bigger than RBC Paracoccidio parasails with the captian's wheel all the way to latin america paraguay is in south america, and you can sail there with your captain wheel
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Tinea Versicolor
caused by malassezia furfur degradation of lipids produces acids that damage melanocytes and cause hypopigmented and or hyperpigmented patches occurs in hot humid weather treat: topical miconazole, selenium sulfide, spaghetti and meatball appearance Furry meatballs look green under a woods lamp
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Trichophytan rubrum
KOH the skin scraping, detects arthroconida and hyphae
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Candida albicans
alba=white systemic or superficial infections Oral and esophageal in immunocompromised or steroid asthma user who doesn't wash out mouth Vulvovaginits, diaper rash, endocarditis in IV drug user, disseminates to any organ, chronic mucocutaneous candidiasis treat: topical azole for vagina, fluconazole or caspofungin for oral/esophageal; systemic is fluconazole, amphotericin B, or caspofungin Diagnosed by gram tube test, budding yeast with short true hyphae catalase positive
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Aspergillis fumigatus
Invasive aspergillosis, especially in immunocompromised or chronic granulomatous disease Allergic bronchopulmonary aspergillosis (ABPA): associated with asthma and cystic fibrosis, may cause bronchiectasis and eosinophilia Aspergillomas in lung cavities, especially after TB infection Some species produce aflatoxins which are associated with hepatocellular carcinoma think A's for Acute Angles in Aspergillus. not dimorphic the aflac duck eats liver and asparagus (aflatoxin of aspergillus causes hepatocellular carcinoma) fumigatus = fumes = lungs Catalase positive
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Cryptococcus Neoformans
Cryptococcal meningitis, cryptococcus Heavily encapsulated yeast not dimorphic found in soil, *pigeon droppings* get it from inhalation with hematogenous spread to meninges culture on Sabouraud agar, stain with india ink and mucicarmine *latex agglutination test detects polysaccharide capsular antigen and is most specific* "Soap Bubble" legions in brain Most common cause of meningitis in AIDS patients in US Sab is a cryptic guy when he visits india because he has a latex soap bubble fetish fetish, he also raises pigeons
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Mucor and Rhizopus spp.
Mucormycosis Disease mostly in ketoacidotic diabetic and leukemic patients fungi proliferate in blood vessel walls when there is excess ketone and glucose penetrate cribriform plate and enter brain rhinocerebral, frontal lobe abscesses Symptoms: headache, facial pain, black necrotic eschar on face, may have CN involvement treat: amphotericin B Ribbon form hypae branching at 90 degrees
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Pneumocystic jirovecii
Causes Pneumocystis pneumonia, diffuse interstitial pneumonia (increased surfactant due to activation of type II pneumocytes leading to death by asphyxiation) Yeast Inhaled Get this if immunosuppressed (AIDS, newborn) X ray shows diffuse bilateral CXR appearance Lung biopsy or lavage confirms *Disc shaped yeast forms on methenamine silver stain* TMP-SMX to treat atovaquone, dapsone to prevent when CD4 count less than 200 pneumodiscus
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Sporothrix schenckii
Sporotrichosis Dimorphic cigar shaped budding yeast that lives on vegetation thorn prick introduces yeast to skin causes local pustule or ulcer with nodules along draining lymphatics little systemic illness treat with itraconazole or potassium iodide ITRy to plant a Rose in a Pot, pot=potassium ITRaconazome
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Giardia lamblia
Giardiasis: blotting, flatulence, foul-smelling, fatty diarrhea often seen in campers/hikers and may be in water supply think fat-rich Ghirardelli chocolates for fatty stools of Giardia, may be asymptomatic comes from cysts in water Look for trophozoites or cysts in stool to diagnose Treat with metronidazole
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Entamoeba histolytica
``` Amebiasis: bloody diarrhea (dysentery), liver abscess (anchovy paste exudate), abdominal abscesses before liver affected RUQ pain (histology shows flask like ulcer if submucosal abscess of colon ruptures comes from cysts in water diagnose by doing serology and or trophozoites (with RBCs in cytoplams) or cysts in stool treat with metronidazole or iodoquinol for asymptomatic cyst passers ```
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Cryptosporidium
Causes severe diarrhea in AIDS Mild disease with watery diarrhea in healthy people get it from Oocysts in water Diagnose by seeing oocysts on acid fast stain treat by prevention (city water filters), nitazoxanide in healthy people Diarrhea caused by bug lysing brush boarder cells (bug replicates in brush border cells) Nita is Sabs cryptic sister who has oocytes and does so much butt stuff that she has severe diarrhea with her AIDS
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Toxoplasma gondii
brain abscess in HIV (ring enhancing lesions on CT/MRI) Congenital Toxoplasmosis= triad of *chorioretinitis, hydrocephalus, and intracranial calcifications* "bright periphery and dark core" due to necrosis Transmitted as cysts in meat, uncooked pork, or oocytes in cat feces, cross placenta (pregnant stay away form cats) diagnose by serology treat with sulfadiazine and pyrimethamine 15-20% of population is infected but immune system makes it go dormant until immune compromised then they get the infection Most common brain infection in HIV patients causing seizures, altered mental status, focal neurologic defects
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Naegleria fowleri
Rapidly fatal meningoencephalitis flagellated trophozoite Get it from swimming in freshwater lakes (Naegleria-Nalgene) enters body via cribiform plate forming necrotic lesions spreading from olfactory lobes Diagnose by amoebas in spinal fluid Treat: amphotericin B, but most still die
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Trypanosoma brucei
African sleeping sickness: enlarged lymph nodes, recurring fever ( due to antigenic variation), somnolence, coma two subtypes: rhodesiense and gambiense get it from Tsetse fly that has a painful bite diagnose by blood smear Suramin for blood borne disease or melarsoprol for CNS penetration (“it sure is nice to go to sleep”; melatonin helps with sleep)
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Plasmodium
Causes malaria: headache, fever, anemia, splenomegaly vivax and ovale-get 48 hour cycle (tertian; fever on first and third day, thus fevers are 48 hours apart) dormant in liver Falciparum-sever; irregular fever pattern; parasites in RBCs occlude capillaries in brain (cerebral malaria), kidney, lungs malariae- 72 hour cycle (quartan) transmitted via misquito (anopheles) diagnosed by blood smear showing trophoziote ring from within RBC, schizont containing merozoites
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Treatment of plasmodium
AKA treatment of malaria Begin with chlorquine, which blocks plasmodium heme polymerase; if resistant use mefloquine or atovaquone/proguanil If life threatening use IV quinidine (test for G6PD deficiency) if Vivax/ovale add primaquine for hypnozoite (test for G6PD deficiency)
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Babesia
Babesiosis: fever and hemolytic anemia; predominantly in Northeastern US, if asplenic you get increase risk of severe disease Transmitted via ixodes tick (same as borrelia burgdorferi of Lymes, so many are co infected) Diagnose via blood smear, see ring form "maltese cross' or PCR Treat with atovaquone + azithromycin
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Trypanosoma cruzi
causes chagas' disease: dilated cardiomyopathy, megacolon, megaesophagus, predominantly in south america Transmitted via Reduciid bug (kissing bug) feces, deposited in a painless bite (much like a kiss) diagnose via blood smear treat with benznidazole or nifurtimox romana sign - unilateral periorbital edema a MEGA-BENZ-MOX-Cruz ship takes you to the other hemisphere (unilateral edema)
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Leishmania donovani
Visceral leishmaniasis: spiking fevers, hepatosplenomegaly, pancytopenia transmitted via sandfly (beachmaniasis) Diagnose via macrophages containing amastigotes Treat with amphotericin B, sodium stibogluconate DONOVANI, the world famous SAND volleyball player SPIKES the volleyball so hard that it goes down your throat and gives you a huge belly (HEPATOSPLENOMEGALY) the mascot goats are there (amastigotes)
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Trichomonas vagainalis
Vaginitis: foul-smelling, yellow-greenish discharge; foul smelling and burning; do not confuse with Gardnerella vaginalis (gram variable bacterium associated with baterial vaginosis) transmitted via sex (cannot exist outside humans, has no cysts) diagnose with trophozoites (motile) on wet mount; see a strawberry cervix Treat with metronidazole for patient and partner (prophylaxis)
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Enterobius vermicularis
roundworm/nematode Transmitted fecal ora causes intestinal infection causing anal pruritus (diagnosed via scotch tape test) treat: bendazoles (BENDy worms) or pyrantel pamoate WA had the scotch tape test done. He is a vermin (vermicularis)
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Ascaris lumbricoides
roundworm/nematode AKA giant roundworm, it is HUGE! 8 inches human fecal-oral; eggs visible in feces under microscope get intestinal infection and some lung, can cause bowel obstruction treat: bendazoles (BENDy worms) or pyrantel pamoate
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Ancylostoma
roundworm/nematode hookworms larvae penetrate skin get intestinal infection causing anemia by sucking blood from intestinal walls
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Strongyloides stercoralis
nematode/roundworm Larvae in soil pentrate the skin get intestinal infection causing vomiting, diarrhea, epigastic pain (like a peptic ulcer) treat with ivermectin or albendazole
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Onchocerca volvulus
nematode/roundworm transmitted via the female blackfly that bites you get hyperpigmented skin and river blindness (blackflies, black skin nodules, "black sight", allergic reaction to microfilaria is possible Treat with ivermectin (ivermectin for iver blindness)
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Loa loa
roundworm/tapeworm transmitted via Deer fly, horse fly, mango fly get swelling in skin, worm in conjunctiva treat with Diethylcarbamazine
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Wuchereria bancrofti
roundworm/nematode get it from female misquito it blocks lympatic vessels: elephantaisis; takes 9 months to a year after bite to get symptoms treat with diethylcarbamazine
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Toxocara canis
nematode/roundworm get it from fecal oral transmission causes visceral larva migrans (go to a ton of organs and cause inflammation and damage) treat with Albendazole or mebendazole
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nematode routes of infection
ingestion is Enterobius, Ascaris, Toxocara Cutaneous is Strongyloides, Ancylostoma, Necator Bites is Loa loa, Onchocerca volvulus, Wuchereria bancrofti "you'll get sick if you EAT these! these get into your ffet from the SANd. lay LOW to avoid getting bitten."
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Taenia solium
Tapeworm transmission: ingestion of larvae encysted in undercooked port, ingestion of eggs Intestinal infection, cysticerosis, neurocystericerosis (focal calcifying brain lesions w/ seizures) Treat: praziquantel (Add albendazole for neurocystericerosis)
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Diphyllobothrium latum
Tapeworm transmission: ingestion of larvae form raw freshwater fish Causes B12 deficiency (tapeworm competes for B12), get anemia treat with praziquantel
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Echinoccus granulosus
Tapeworm Get it from ingestion of eggs from dog feces Causes hydatid (containing tape worm) cysts in liver, causing anaphylaxis if antigens released, surgeons pre-inject w/ ethanol to kill cysts before removal Treat w/ albendazole
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Schistosoma
Trematode (flukes) get it from snails, cercariae (larval stage) penetrate skin of human causes: liver and spleen granulomas, fibrosis and inflammation: if chronic infection w/ S. haematobium can lead to squamous cell carcinoma of the bladder (painless hematuria) Treat w/ praziquantel
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Clonorchis sinensis
treamatode (flukes) get it from undercooked fish causes biliary tract infection causing pogmented gallstons. Associated with *cholangiocarcinoma* treat w/ praziquantel
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Viral recombination
exchange of genes between 2 chromosomes by crossing over within regions of significant base sequence homology
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Viral reassortment
When viruses with segmented genomes exchange segments. High frequency recombination. Cause of world wide influenza pandemics
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Viral complementation
When 1 of 2 viruses that infect the cell has a mutation that results in a nonfunctional protein the nonmutated virus "complements" the mutated one by making a functional protein that serves both viruses
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Viral Phenotypic mixing
occurs w/ simultaneous infection of a cell with 2 viruses. genome of virus A can be partially or completely coated (forming pseudovirion) with the surface proteins of virus B. Type B protein coat determines the tropism (infectivity) of the hybrid virus. However, the progeny from this infection have a type A coat that is encoded by its type A genetic material.
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Live attenuated viruses
induce humoral and cell-mediated immunity but have reverted to virulence on rare occasions killed/inactivated vaccines induce only humoral immunity but are stable no boosters needed Dangerous to give live viruses to immunocompromised patients or those w/ close contacts
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Examples of live attenuated viruses
smallpox, yellow fever, chickenpox, sabian polio virus, MMR, influenza
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Killed virus vaccines
Rabies, influenza, Salk polio, and HAV vaccines
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Recombinant viral Vaccines
HBV (antigen=recombinant HBsAg), HPV (types 6, 11, 16, 18)
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DNA viral genomes
All DNA viruses except parvoviridae are dsDNA | all are linear except papilloma, polyoma, and hepadnaviruses (circular)
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RNA viral genomes
All RNA viruses except reovirdae are ssRNA
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Naked viral genome infectivity
purified nucleic acids of most dnDNA (except poxviruses and HBV) and positive strand ssRNA viruses are infectious. Naked nucleic acids of negative strand of ssRNA and dsRNA are not infectious, they require polymerases contained in the complete virion.
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DNA viruses all replicate in the
nucleus (Except poxvirus)
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RNA viruses all replicate in the
cytoplasm | except influenza and retrovirus
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What are the naked enveloped viruses
DNA- (PAPP)Papillomavirus, Adenovirus, Parvovirus, Polyomavrius RNA- (CPR-H) Calicivirus, picornavirus, Reovirus, and Hepevirus
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enveloped viruses acquire their envelopes from
the plasma membrane of the cell | except for herpesvirus which gets it from the nuclear membrane
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Herpesviruses
Enveloped dsDNA and linear genome HSV-1: oral lesions, temporal lobe encephalitis, keratoconjunctivitis HSV-2: genital lesions VZV(HHV-3): chickenpox, shingles EBV (HHV-4): mononucleosis, Burkitt lymphoma, Hodgkin lymphoma CMV(HHV5): infection in immunocompromised patients (AIDS retinitis), especially transplant patients, congenital defects (sightomegalovirus) HHV-6 roseola (exanthem subitum) HHV-7: less common cause of roseola HHV-8 causes kaposi sarcoma
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Hepadnavirus
Enveloped Partially dsDNA and circular HBV: acute or chronic hepatitis, vaccine has HBV surface antigens not a retrovirus but has reverse transcriptase
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Adenovirus
``` not enveloped dsDNA and linear Febrile pharyngitis, sore throat acute hemorrhagic cystitis pneumonia conjunctivitis "pink eye" Contaminated swimming pools can transmit it to many people ```
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Parvovirus
not enveloped ssDNA (-) and linear: smallest DNA virus B19 virus: aplastic crises in sickle cell disease, slapped cheeks rash in kids-erythema infectiosum (fifths disease), RBC destruction in fetus leads to non-immune hydrops fetalis and death (aplastic anemia), pure RBC aplasia and rheumatoid arthritis-like symptoms in adults
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Papillomavirus
``` not enveloped dsDNA and circular HPV-warts from 1, 2, 6, 11 CIN, cervical cancer from 16 and 18 vaccine available ```
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Polyomavirus
Not enveloped dsDNA and circular JC virus: progressive multifocal leukoencephalopathy (PML) in HIV (JC=Junky Cerebrum) BK virus: transplant patients, commonly targets kidney (BK=bad kidney)
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Poxvirus
"brick shaped" (only DNA not icosahedral) enveloped does not use nucleus to make DNA (only DNA virus to do that) dsDNA and linear (largest DNA virus) smallpox Cowpox (milkmaid blisters) molluscum contagiosum: flesh colored dome lesions with central umbilicated dimple
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HSV-1
Herpes encephalitis: hypodensity of temporal and frontal lobes on CT, increase lymphocytes in csf cowdry type A inclusion in neurons and glia in encephalitis gingivostomatitis, keratoconjunctivits, herpes labialis latent in trigeminal ganglia transmitted by respiratory secretions and saliva
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HSV-2
herpes genitalis, neonatal herpes; small tender nodules with inguinal lymph node involvement latent in sacral ganglia transmitted by sexual contact, perinatally
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VZV
varicella-zoster, encephalitis, pneumonia latent in dorsal roots or trigeminal ganglia most common complication of shingles is post-herpetic neuralgia. transmitted by respiratory droplets
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EBV
Mononucleosis: fever, hepatosplenomegaly, pharyngitis, and lymphadenopathy (posterior cervical lymph nodes) Transmitted by secretions and saliva infects B cells: atypical lymphocytes seen on peripheral blood smear are not infected B cells but rather reactive cytotoxic T cells Detect by monospot test: heterophile antibodies detected by agglutination of sheep or horse RBCs Associated w/ hodgkin lymphoma, endemic burkitts lymphoma, and nasopharyngeal carcinoma (cytokeratin positive)
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CMV
Congenital infection, mononucleosis (negative monospot though), pneumonia, retinitis. infected cells have Owl eye inclusions latent in mononuclear cells transmitted congenitally and by transfusion, sexual contact, saliva, urine, transplant
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HHV-6
Roseola: high fevers for several days that can cause seizures, followed by a diffuse macular rash transmitted by saliva
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HHV-8
Kaposi sarcoma: neoplasm of endothelial cells, seen in HIV/AIDS and transplant patients Dark/violaceous flat and nodular skin lesions representing endothelial growths. can also affect GI tract and lungs transmitted by sexual contact
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Viruses that can cause neonatal encephalitis
1. HSV1 2. HSV2 3. CMV
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How to identify HSV
viral culture for skin/genitalia CSF PCR for herpes encephalitis Tzanck test (genital herpes)- a smear of an open skin vesicle to detect multinucleated giant cells Infected cells also have Cowdry A inclusions
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Reoviruses
``` not enveloped dsRNA linear 10-12 segments iscosahedral coltivurs- colorado tick fever rotalvirus- #1 cause of fatal diarrhea in children ```
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Picornaviruses
``` no envelope ssRNA positive, linear icosahedral PERCH viruses Poliovirus: polio-Salk/Sabin-IPV/OPV Echovirus- aseptic meningitis Rhinovirus: common cold Coxsackievirus: aseptic meningitis; herpangina, hand, foot and mouth disease; myocarditis; pericarditis HAV- acute viral hepatitis Fecal oral spread except rhinovirus ```
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Hepevirus
No envelope ssRNA positive linear icosahedral causes HEV
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Caliciviruses
not enveloped ssRNA positive linear icosahedral norovirus: viral gastroenteritis
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Flaviviruses
enveloped ssRNA positive, linear Icosahedral HCV, yellow fever, Dengue, St. Louis encephalitis, West nile virus
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Togaviruses
Enveloped ssRNA positive, linear icosahedral Rubella, eastern and western equine encephalitis
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Retroviruses
``` Enveloped ssRNA positive linear icosahedral have reverse transcriptase HTLV- T-cell leukemia HIV-AIDS ```
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Coronaviruses
enveloped ssRNA positive and linear helical coronavirus- common cold and SARS
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Orthomyxoviruses
``` enveloped ssRNA negative and linear 8 segments helical influenza replicates in nucleus only (only RNA virus that needs nucleus) ```
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Paramyxoviruses
``` enveloped ssRNA linear Helical PaRaMyxovirus: Parainfluenza: croup Rsv: bronchiolitis in babes (treat with ribavirin) Measles, Mumps ```
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Rhabdoviruses
enveloped ssRNA negative linear helical Rabies
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Filoviruses
enveloped ssRNA negative linear helical ebola/marburg hemorrhagic fever- often fatal
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Arenaviruses
``` Enveloped ssRNA negative circular 2 segments helical LCMV: lymphocytic choriomeningitis virus Lassa fever encephalitis: spread by mice ```
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Bunyaviruses
``` enveloped ssRNA negative 3 segments helical California encephalitis Sandfly/Rift valley fever Crimean-COngo hemorrhagic fever Hantavirus- hemorrhagic fever, pneumonia ```
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Delta Virus
enveloped SS negative circular unknown capsid HDV is a defective virus that requires HBV co-infection
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negative strand RNA viruses
must transcribe negative strand to positive. viron brings its own RNA-dependent RNA polymerase Always Bring Polymerase Or Fail Replication Arenavirus, Bunyavirus, Paramyxovirus, Orthomyxovirus, Filovirus, Rhabdovirus
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Segmented viruses
all RNA, no segmented DNA viruses Bunyavirus, Orthomyxovirus, Arenavirus, Reovirus BOAR!
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Rhinovirus
``` a picornavirus nonenveloped RNA virus causes of common cold (rhino runny nose) over 100 serologic types acid labile- destroyed by stomach acid- so it does not infect GI tract (all other picornaviruses do) ```
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Yellow Fever Virus
``` a flavivirus (and an arbovirus) transmitted by Aedes mosquitoes Virus has a monkey or human reservoir High fever, black vomitus, and jaundice Flavi=yellow ```
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Rotavirus
the most important cause of global infantile gastroenteritis segmented dsRNA virus (reovirus) major cause of acute diarrhea in the US during winter, especially in day care settings, kindergartens villous destruction with atrophy leads to decreased absorption of Na and loss of K ROTAvirus=Right Out The Anus CDC recommend vaccine for all infants
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Influenza virus
Orthomyxovirus enveloped, negative ssRNA, 8 segments contain hemagglutinin (promotes viral entry) and neuraminidase (promotes progeny virion release) antigens. patients at high risk for fatal bacterial superinfection rapid genetic changes
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Genetic shift/antigenic shift
causes pandemics reassortment of viral genome; segments undergo high-frequency recombination such as when human flu A virus recombines with swine flu A virus
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Genetic drift
causes epidemics | minor changes based on random mutation
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Rubella virus
Togavirus AKA german measles fever, postauricular and other lymphadenopathy, arthralgias, fine rash causes mild disease in children but serious congenital disease (ToRCHes) Congenital rubella findings include blueberry muffin appearance, indicative of extramedullary hematopoiesis, cataracts, deafness, PDA
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Paramyxovirus diseases
parainfluenza (croup), mumps, measles, as well as RSV, which causes respiratory tract infection (bronchiolitis, pneumonia) in infants (fever, labored breathing, expiratory wheezes, tachypnea, tachycardia) all contain surface F (fusion) protein which causes respiratory epithelia cells to fuse and form multinucleated cells Palivizumab is treatment
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Palivizumab
monoclonal antibody against F protein | prevents pneumonia caused by RSV infection in premature infants
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Measles Virus
a paramyxovirus koplik spots and descending maculopapular rash are characteristic SSPE (subacute sclerosing panencephalitis) giant cell pneumonia (rare, in immune suppressed) 3 C's of measles: Cough Coryza (swelling of mucous membranes in nose) Conjunctivitis Vitamin A used to prevent severe exfoliative dermatitis in malnourished children
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SSPE
subacute sclerosing panencephalitis occurs 6 or more years after measles virus (Get measles before 2 years of age) spasticity, ataxia, coma, behavior changes, increased immunoglobulins in CSF
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Mumps virus
Paramyxovirus Parotitis, Orchitis, aspectic Meningitis Can cause sterility Mumps makes your parotid glands and tests as big as POM-poms.
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syncytia
giant multi nucleated cells will show up from viruses of paramyxovirus and herpesvirdae viruses is a mechanism of immune system
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Rabies virus
bullet shaped virus get negri bodies in purkinje cells of cerebellum and in hippocampal neurons weeks to months incubation period Give rabies immune globulin travels to CNS by migrating retrograde fashion up axons Progression of disease: fever, malaise, agitation, photophobia, hydrophobia, paralysis, coma, then death SKUNKS, raccoon, bat
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HAV
``` hep A RNA picornavirus fecal oral transmission no carrier weeks of incubation usually asymptomatic ```
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HBV
Hep B DNA hepadnavirus parenteral, sexual, maternal-fetal spread there are carriers months of incubation increased risk of HCC (hepatocellular carcinoma), integrates into host DNA and acts as oncogene
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HCV
Hep C (Chronic, Cirrhosis, Carcinoma, Carrier) RNA flavivirus Primarily blood transmission There are carriers long incubation increased HCC risk from chronic inflammation
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HDV
Hep D (Defective, Dependent on HBV) RNA delta virus Parenteral, sexual, maternal-fetal spread there are carriers co infected (long incubation) or super infected (short incubation, bad prognosis) increased HCC risk
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HEV
RNA hepevirus (Enteric, Expectant mothers, Epidemic) spread Fecal-oral, especially with waterborne epidemics there are no carriers short incubation no increased HCC risk High mortality in pregnant women
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Anti-HAV IgM
IgM antibody to HAV; best test to detect active Hep A
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anti-HAV IgG
IgG antibody to detect prior HAV infection and/or prior vaccination; protects against reinfection
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HBsAg
antigen found on surface of HBV; indicates hep B infection
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Anti-HBs
antibody to HBsAg; indicates immunity to hep B
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HBcAg
antigen associated with core of HBV
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Anti-HBc
antibody to HBcAg; IgM=acute/recurrent infection; IgG= prior exposure or chronic infection. positive during window period
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HBeAg
A second, different antigenic determinant in the HBV core. HBeAg indicates active viral replication and therefore high transmissibility
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Anti-HBe
antibody to HBeAg; indicates low transmissibility
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Chlamydia infection causes inflammatory pelvic disease. This predisposes females to:
ectopic pregnancy with tubular rupture. The infection caused inflammation and scarring due to type 4 hypersensitivity and all that damage can lead to ectopic pregnancy. Eventually ectopic pregnancy leads to rupture
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HIV: all of its major proteins and genes that give it virulence
``` Diploid genome (2 RNA molecules) env gene (codes for gp120 and pg41): formed from the cleavage of gp160 to form envelope glycoproteins, gp120 is for attachment to the host CD4+ t cell, gp41 is for fusion and entry gag gene (codes for p24): for capsid protein pol gene (reverse transcriptase, asparate protease, integrase): RT synthesizes dsDNA from RNA; dsDNA integrates into host genome. Virus binds CCR5 (early) or CXCR4 (late) co receptor and CD4 on T cells; binds CCR5 and CD4 on macrophages. U ```
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How to diagnose HIV
Presumptive diagnosis made with ELISA (sensitive, high false positive rate and low threshold, rule out test); + results are confirmed with western blot assay (specific, high false negative rate and high threshold, rule in test). Viral PCR load will give you prognosis AIDS is confirmed HIV with
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Prion diseases
are caused by conversion of a normal (usually alpha helix) protein termed prion protein (PrPc) to a beta pleated form (PrPsc), which is transmissible. PrPsc resists protease degradation and facilitates the conversion of still more PrPc to PrPsc. Accumulation of PrPsc results in spongiform encephalopathy and dementia, ataxia, and death. It can be sporadic (creutzfeldt-jakob disease) or inherited (Gerstmann-Straussler-Scheinker syndrome), or acquired, (kuru).
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What is the normal flora of the skin
S epidermidis
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What is the normal flora of the nose
S epidermidis and S. aureus
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What is the normal flora of the oropharynx
Viridans strep
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What is the normal flora of dental plaque
S. mutans
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What is the normal flora of colon
B fragilis > e coli
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What is the normal flora of Vagina
Lactobacillus, colonized by E coli and group B strep
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Bugs causing food poisoning, what do you get it from: B. cereus
Reheated rice. "Yes, and B. serious about it, it sucks."
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Bugs causing food poisoning, what do you get it from: C. botulium
Improperly canned foods (bulging cans is a sign...haha...bulging cans.....haha...C her BODulium...haha) Also alkaline canned foods like veggies
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Bugs causing food poisoning, what do you get it from: C. perfringens
reheated meat dishes
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Bugs causing food poisoning, what do you get it from: E coli 0157:H7
Undercooked meat
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Bugs causing food poisoning, what do you get it from: Salmonella
Poultry, meat and eggs
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Bugs causing food poisoning, what do you get it from: S. aureus
Meats, mayonnaise, custard; preformed toxin
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Bugs causing food poisoning, what do you get it from: V parahaemolyticus and V. vulnificus
contaminated seafood | vulnificus can also cause wound infections just by touching contaminated food with open cut
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What bugs cause bloody diarrhea
campylobacter, E. histolytica, Enterohemorrhagic E coli, enteroinvasice E. coli, salmonella, shigella, Y enterocolitica
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What bugs cause bloody diarrhea
C diff, C perfringens, Enterotoxigenic e coli, protozoa, v cholerae, some viruses.
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Most common cause of pneumonia in neonates less than 4 weeks old
Group B strep (S. agalactiae) | E. coli
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Most common cause of pneumonia in children 4 weeks to 18 years old
Virus (RSV), Mycoplasma, C. trachomatis (infants to 3 years old), C. pneumoniae (school age), S. pneumoniae, (Runts May Cough Chunky Sputum)
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Most common cause of pneumonia in Adults (18 to 40)
Mycoplasma, C. pneumoniae, S. pneumoniae
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Most common cause of pneumonia in Adults (40-65
S. pneumoniae, H. influenzae, Anaerobes, Viruses, Mycoplasma
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Most common cause of pneumonia in Elderly 65+
S. pneumoniae, Influenza virus, Anaerobes, H. influenzae, Gram-negative rods
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Most common cause of pneumonia in Alcoholic/IV drug users
S. pneumoniae, Klebsiella, Staphylococcus
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Most common cause of pneumonia in Aspiration
Anaerobes (bacteriodes, peptococcus, fusobacterium), will be foul smelling sputum that is rust colored (these are the normal flora being thrown up and getting into the lung. Look for patient who goes unconscious.
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Most common cause of pneumonia in atypical pneumonia
Mycoplasma, Legionella, Chlamydia
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Most common cause of pneumonia in Cystic Fibrosis
Pseudomonas, S. aureus, S. pneumoniae
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Most common cause of pneumonia in Immunocompromised
Staphylococcus, enteric gram negative rods, gungi, virsuses, P jirovecii (HIV)
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Most common cause of pneumonia in nosocomial infections
staph, pseudomonas, other enteric gram negative rods
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Most common cause of pneumonia in Post-viral pneumonia infections
Staph, H. influenzae, S. pneumoniae
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Common causes of meningitis for New born (0-6 months)
Group B strep, E coli, Listeria
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Common causes of meningitis for Children (6 months to 6 years)
S pneumoniae, N meningitids, H influenzae type B, Enteroviruses
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Common causes of meningitis for 6 to 60 year olds
S. Pneumoniae, N meningitidis (#1 in teens), Enteroviruses, HSV
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Common causes of meningitis for 60+ year olds
S. pneumoniae, gram negative rods, listeria
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Medication you give empirically for meningitis
Give ceftriaxone, vancomycin, and add ampicillin if listeria is suspected
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Viral causes of meningitis
enterociruses, HSV-2, HIV, West nile virus, VZV,
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What are the common causes of meningitis in HIV patients
Cryptococcus, CMV, toxoplasmosis (brain abscess), JC virus (PML)
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CSF fundings in bacterial meningitis
Increase opening pressure Increase PMNs increased protein decreased sugar
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CSF findings in fungal or TB meningitis
Increased opening pressure increased lymphocytes increased protein decreased sugar
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CSF findings in viral meningitis
normal to increased opening pressure increased lymphocytes Normal to increased proteins normal sugar
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Most likely cause of Osteomyelitis if patient has: no risk factors
assume S. aureus
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Most likely cause of Osteomyelitis if patient is sexually active
Neisseria gonorrhoeae (rare), septic arthritis more common
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Most likely cause of Osteomyelitis if patient has: diabetes
Pseudomonas aeruginosa, Serratia
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Most likely cause of Osteomyelitis if patient has: IV drug users
Pseudomonas aeruginosa, Serratia
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Most likely cause of Osteomyelitis if patient has: Sickle cell
Salmonella
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Most likely cause of Osteomyelitis if patient has: Prosthetic joint replacement
S. aureus and S epidermidis
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Most likely cause of Osteomyelitis if patient has: Vertebral involvement
Mycobacterium tuberculosis (Pott disease)
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Most likely cause of Osteomyelitis if patient has: Cat and dog bites
Pasteurella multocida
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UTI presentation
dysuria, frequency, urgency, suprapubic pain, and WBCs (but not WBC casts) in urine.
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UTI diagnosis
Leukocyte esterase test + means bacterial UTI; nitrite test + means gram negative bacterial UTI
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UTi urease test positive means most likely what bugs
proteus or klebsiella
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UTI bugs: E coli
Leading cause of UTI, colonies show green metallic sheen on EMB agar, negative urease test, positive nitrite test
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UTI bugs: Staphylococcus saprophyticus
2nd leading cause of UTI, in sexually active women, urease test negative, nitrite test negative
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UTI bugs: Klebsiella pneumoniae
3rd leading cause of UTI, large mucoid capsule and viscous colonies Urease test +
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UTI bugs: Serratia marcescens
some strains produce a red pigment; often nosocomial and drug resistant
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UTI bugs: Enterobacter cloacae
often nosocomial and drug resistant
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UTI bugs: Proteus mirabilis
motility causes "swarming" on agar; produces urease; associated with struvite stones.
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UTI bugs: pseudomonas aeruginosa
blue-green pigment and fruity odor; usually nosocomial and drug resistant.
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Bacterial Vaginosis
No inflammation, thin, white discharge with fishy odor See clud cells and a pH > 4.5 Treat: metronidazole
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Trichomoniasis vaginal infection
Inflammation, frothy, grey-green foul smelling discharge Motile trichomonads with a pH > 4.5 treat: metronidazole and make sure you treat sexual partner
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Candida vulvovaginitis:
Inflammation, thick, white, "cottage cheese" discharge Pseudohyphae pH is normal (4 to 4.5) treat with -azoles Factors that increase chance of getting this infection: diabetes (Increase sugar in secretions), antibiotic use, increase estrogen levels, immune compromised
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ToRCHeS infections: what is it, how do you get it, symptoms
microbes that may pass from mother to fetus. Transmission is tranplacental in most cases, or via delivery (especially HSV-2). nonspecific signs common to many ToRCHeS infections include hepatosplenomegaly, jaundice, thrombocytopenia, and growth retardation. Other agents: Strep Agalactiae, E coli, Listeria monocytogenes, all cause meningitis in neonates. Parvovirus B19 causes hydrops fetalis.
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ToRCHeS infection: Toxoplasma gondii
get it from Cat feces or ingestion of undercooked meat Mom's manifestions: usually none, rarely lymphadenopathy Neonatal manifestions: Classic triad: chorioretinitis, hydrocephalus, and intracranial calcifications
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ToRCHeS infection: Rubella
Transmission: respiratory droplets mom symptoms: rash, lymphadenopathy, arthritis Neonatal symptoms: Classic triad: PDA (or pulmonary artery hypoplasia), cataracts, and deafness +/- blueberry muffin rash
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ToRCHeS infection: CMV
Transmitted via sexual contact or organ transplant Mom symptoms: Rash, lymphadenopathy, arthritis Neonatal symptoms: Hearing loss, seizures, petechial rash, blueberry muffin rash (lots of cutaneous hemorrhages), calcifications in periventricular calcifications
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ToRCHeS infection: HIV
Transmitted via sexual contact or needle stick Maternal symptoms: Cariable presentation depending on CD4+ count Neonatal manifestions: recurrent infections, chronic diarrhea
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ToRCHeS infection: Herpes simplex virus 2
transmitted via skin or mucous membrane contact mom symptoms: usually asymptomatic; herpetic vesicular lesions Neonatal symptoms: encephalitis, herpetic vesicular rash
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ToRCHeS infection: Syphilis
transmitted via sexual contact Maternal manifestations: chancre (primary) and disseminated rash (secondary) are the two stages likely to result in fetal infection Neonatal manifestations: often results in stillbirth, hydrops fetalis; if child survives, presents with facial abnormalities (notched teeth, saddle nose, short maxilla), saber shins, CN VIII deafness
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V. vulnificus
gram negative, comma, oxidase positive, rod, sensitive to acid Causes: gastroenteritis, cellulitis treat: tetracycline, 3rd generation cephalasporin
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Red rashes of childhood: Coxsackievirus type A
Hand foot mouth disease | Vesicular rash on palms and soles; vesicles and ulcers in oral mucosa
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Red rashes of childhood: HHV-6
Roseola A macular rash over body appears after several days of high fever; can present with febrile seizures; usually affects infants
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Red rashes of childhood: Measles
Measles (Rubeola) A paramyxovirus; beginning at head and moving down; rash is preceded by cough, coryza, conjunctivitis, and blue-white Koplik spots on buccal mucosa
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Red rashes of childhood: Parvovirus B19
``` Erythema infectiosum (fifths disease) Slapped cheek rash on face; can cause hydrops fetalis in pregnant women; adults get swollen joints mostly in hands and wrists ```
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Red rashes of childhood: Rubella virus
Rubella | Rash begins at head and moves down; leads to fine truncal rash; postauricular lymphadenopathy
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Red rashes of childhood: Streptococcus pyogens
Scarlet fever | Erythematous, sandpaper like rash with fever and sore throat
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Red rashes of childhood: VZV
Chickenpox | Vesicular rash begins on trunk; spreads to face and extremities with lesions of different ages
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Sexually transmitted diseases: AIDS
spread by HIV | leads to opportunistic infections, Kaposi sarcoma, lymphoma
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Sexually transmitted diseases: Chancroid
from Haemophilus ducreyi (so painful you do cry) | Painful genital ulcer, inguinal adenopathy, starts as papule then painful genital ulcer;
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Sexually transmitted diseases: Chlamydia
From chlamydia trachomatis (D-K) | causes urethritis, cervicitis, conjunctivitis, reactive arthritis, Pelvic inflammatory disease
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Sexually transmitted diseases: Condylomata acuminata
From HPV-6 and 11 | Causes genital warts and koilocytes
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Sexually transmitted diseases: Genital herpes
from HSV-2, less commonly HSV-1 | Painful penile, vulvar, or cervical vesicles and ulcers; can cause systemic symptoms such as fever, headache, myalgia
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Sexually transmitted diseases: Gonorrhea
from neisseria gonorrhoeae | Causes Urethritis, cervicitis, PID, prostatitis, edidiymitis, arthritis, creamy purulent discharge
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Sexually transmitted diseases: Hepatitis B
from HBV | causes jaundice
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Sexually transmitted diseases: Lymphogranuloma venereum
Caused by C. trachomatis (l1-l3) | infectino of lymphatics; painless genital ulcers, painful lymphadenopathy (i.e. buboes)
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Sexually transmitted diseases: primary syphilis
From Treponema pallidum | Painless chancre
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Sexually transmitted diseases: secondary syphilis
From Treponema pallidum | fever, lymphadenopathy, skin rashes, condylomata lata
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Sexually transmitted diseases: tertiary syphilis
From Treponema pallidum | Gummas, tabes dorsalis, general paresis, aortitis, Argyll Robertson pupils
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Sexually transmitted diseases: Trichomoniasis
From Trichomonas vaginalis | Causes vaginitis, strawberry cervix, motile in wet prep
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Pelvic inflammatory disease: Top causative bugs
Chlamydia trachomatis (subacute, often undiagnosed, the most common bacterial STD in the US), Neisseria gonorrhoeae (acute),
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Pelvic inflammatory disease
Cervical motion tenderness (chandelier sign), purulent cervical discharge. PID may include salpingitis, endometritis, hydrosalpinx, and tubo-ovarian abscess. Can lead to Fitz-High-Curtis syndrome- infection of the liver capsule and violin string adhesions of peritoneum to liver Salpingitis is a risk factor for ectopic pregnancy infertility, chronic pelvic pain and adhesions.
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Nosocomial infections: Candida albicans, risk factors
hyperalimentation
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Nosocomial infections you are at risk for in a Newborn nursery
CMV and RSV
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Nosocomial infections you are at risk for urinary catheterizations
E. coli, Proteus mirabilis, the second most common causes of nosocomial infections are E coli and S aureus
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Nosocomial infections you are at risk for if you work in renal dialysis unit
HBV
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Nosocomial infections you are at risk for if there are water aerosols being used
Legionella
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Nosocomial infections you are at risk for if your use respiratory therapy equipment
Pseudomonas aeruginosa, presume pseudomonas "airuginosa" when air or burns are involved
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What bugs do you think of when you hear: asplenic patients (due to splenectomy or autosplenectomy, e.g.,, chronic sickle cell anemia)
Encapsulated microbes, especially SHiN (S. pneumoniae >> H. influenzae type B > N. Meningitidis)
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What bugs do you think of when you hear: Branching rods in oral infection, sulfur granules
actinomyces israelii
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What bugs do you think of when you hear: Chronic Granulomatous disease
Catalase positive mucrobies, especially S. aureus
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What bugs do you think of when you hear: Currant Jelly sputum
Klebsiella, see lobar cavitation on x ray
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What bugs do you think of when you hear: Dog or cat bite
Pasteurella multocida
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What bugs do you think of when you hear: Facial nerve palsy
Borrelia burgdorferi (lymes disease)
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What bugs do you think of when you hear: Fungal infection in diabetic or immunocompromised patient
Mucor or Rhizopus spp.
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What bugs do you think of when you hear: health care provider that is sick
HBV from needlestick (I guess you just assume the stuck themselves......)
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What bugs do you think of when you hear: Neutropenic patients
Candida albicnas (Systemic), Aspergillus
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What bugs do you think of when you hear: Organ transplant recipient
CMV
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What bugs do you think of when you hear: PAS positive
Tropheryma whippleu (whipple disease)
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What bugs do you think of when you hear: Pediatric infection
Haemophilus influenzae (including epiglottitis)
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What bugs do you think of when you hear: Pus, empyema, abscess
S. aureus
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What bugs do you think of when you hear: Rash on hands and feet
Coxsackie A virus, Treponema pallidum, Rickettsia rickettsii
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What bugs do you think of when you hear: sepsis/meningitis in newborn
Group B strep
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What bugs do you think of when you hear: Surgical wound
S aureus
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What bugs do you think of when you hear: Traumatic open wound
Clostridium perfringens
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Penicillin G, V
G is IV and IM, V is oral Binds penicillin-binding proteins (transpeptidases). Block transpeptidase cross-linking of peptidoglycan. Activate autolytic enzymes Used: mostly used for gram positive bugs (S. pneumoniae, S. pyogenes, Actinomyces), N. Meningitids, T. pallidum. Bactericidal for gram + cocci, gram + rods, gram - cocci, and spiorchetes. Toxicity: hypersensitivity reactions, hemolytic anemia Resistance: penicillinase in bacteria cleaves beta lactam ring
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Aminopenicillins
Ampicillin , amoxicillin Mechanism: same as penicillin, wider spectrum Use: H. influenzae, E coli, Listeria monocytogenes, Proteus mirabilis, Salmonella, Shigella, enterococci Toxicity: hypersensitivity reactions; rash; pseudomembranous colitis (C. diff) Resistance: penicillinase
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Penicillinase-resistant penicillins
Oxacillin, nafcillin, dicloxacillin Mechanism: same as penicillin, narrow spectrum, resistant because due to bulky R group Clinical use: S. aureus (except MRSA; resistant because o faltered penicillin-binding protein target site) Toxicity: hypersensitivity reactions, interstitial nephritis
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Antipseudomonals
Ticarcillin, piperacillin Mechanism: same as penicillin. Clinical: Pseudomonas spp. and gram negative rods, susceptible to penicillinases
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Beta lactamase inhibitors
Clavulanic Acid, Sublactam, Taxobactam | Added to penicillin antibiotics to prevent destruction from penicillinase.
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Polymyxin B
Used for serious infections, given IV For gram - bacilli, Pseudomonas aeruginosa, klebsiella Binds LPS on membrane, acts as catatonic detergent, alters osmotic barrier Nephrotoxicity
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Cephalosporins: Mechanism
Beta-lactam drugs that inhibit cell wall synthesis but are less susceptible to penicillinases. Bactericidal Organisms NOT covered by cephalosporins are LAME: Listeria, Atypicals (chlamydia, mycoplasma), Mrsa, and Enterococci
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Cephalosporins: 1st generation
Cefazolin, cephalexin gram + cocci for PEcK: Proteus mirabilis, E coli, Klebsiella pneumoniae Cefazolin used prior to surgery to prevent S. aureeus wound infections
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Cephalosporins: 2nd generation
Cefoxitin, cefaclor cefuroxime for gram + cocci (HEN PEcKS) Haemophilus influenza, Enterobacter aerogenes, Neisseria spp., Proteus mirabilis, E. coli, Klebsiella pneumoniae, Serratia marcescens
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Cephalosporins: 3rd generation
ceftriaxone, cefotaxime, ceftazidime serious gram - infections resistant to other beta lactams Ceftriaxone- for meningitis and gonorrhea Ceftazidime- for Pseudomonas
419
Cephalosporins: 4th generation
cefepime | increases activity against Pseudomonas and gram + organisms
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Cephalosporins: 5th generation
Ceftaroline Broad gram + and gram - organism coverage including MRSA; does not cover pseudomonas
421
Cephalosporins: toxicity
Hypersensitivity reactions, vitamin K deficiency, low cross-reactivity with penicillins. Increase nephrotoxicity of aminoglycosides
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Aztreonam
Monobactum penicillin Resistant beta lactamases. Prevent peptidoglycan cross-linking by binding to penicillin-binding protein 3. Synergistic with aminoglycosides. No cross-allergenicity with peniciliins Uses: gram - rods, no activity against gram + or anaerobes. For penicillin allergic patients and those with renal insufficiency who cannot tolerate aminoglycosides Toxicity: usually nontoxic; occasional GI upset
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Daptomycin
Works on gram + treat skin/skin structure infectinos given IV no toxicity usually rapid cell death, binds to membrane causes rapid depolarization Gram postive only (MRSA and Vanco resistant) REsistance is from positive charged lysines repelling drup
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Carbapenems
Imipenem, meropenem, ertapenem, doripenem imipenem is broad spectrum, beta lactamase resistant carbapenem. Always administered with cilastin (inhibitor of renal dehydropeptidase I) to decrease inactivation of drug in renal tubules Uses: Gram + cocci, gram - rods, and anaerobes. wide spectrum but significant side effects so use when patient is about to die. Meropenem has a decreased risk of seizures and is stable to dehydropeptidase I. Toxicity: GI distress, skin rash, and CNS toxicity (seizures) at a high plasma levels)
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Vancomycin
Inhibits cell wall peptidoglycan formation by binding D-ala D-ala portion of cell wall precursors. Bactericidal. Clinical use: gram + only, serious, multi-drug resistant organisms, including MRSA, enterococci, and C diff Toxicity: well tolerated in general but NOT trouble free. Nephrotoxicity, Ototoxicity, Thrombophlebitis, diffuse flushing- red man syndrome (can largely prevent by pretreatment with antihistamines and slow infusion rate) Resistance: D-ala D-ala switches to D-ala D-lac
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Bacitracin
``` Topical or IM Pain at IM, nephrotoxicity Cell wall inhibitor, prevent incorporation of peptidoglycans and lipopolysaccharides Used for gram + and gram - Not beta lactam ```
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Food poisoning with S. aureus
Ham, potato salad, and pastries | has exotoxin A which produces nausea and vomiting in a few hours (3-6), with little to no diarrhea
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aminoglycosides
gentamicin neomycin, amikacin, tobramycon, streptomycin Mechanism: bactericidal; binds 30s, inhibits formation of initiation complex and cause misreading of mRNA. Also block translocation. Require 02 for uptake; therefore ineffective against anaerobes. Uses: severe gram - rod infections. synergistic with beta lactam antibiotics Toxicity: Nephrotoxicity (especially when used with cephalosporins), Neuromuscular blockade, Ototoxicity (especially when used with loop diuretics), Teratogen, ototoxic to fetus
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Tetracyclines
Tetracycline, doxycycline, minocycline Bacteriostatic: binds 30s, prevetns attachment of aminoacyl-tRNA' limited CNS penetration, doxy is fecally excreted and can be used during renal failure. Do not take with Ca or Mg, or iron because divalent cations block absorption. Uses:Borrelia burgdorferi, M pneumoniae, drugs ability to accumulate intracellularly makes it very effective against Rickettsia and Chlamydia, also used to treat acne. Toxicity: Gi distress, discoloration of teeth and inhibition of bone growth in children, photosensitivity, contraindicated in pregnancy
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Macrolides
Azithromycin, clarithromycin, erythromycin Mechanism: inhibits protein synthesis by blocking translocation; binds to the 23s subunit of the 50s ribosomal subunit: bacteriostatic Uses: atypical pneumonias (Mycoplasma, Chlamydia, Legionella), STDs (Chlamydia), gram + cocci (Strep infections in penicillin allergic patients) Toxicity: MACRO: gastrointestinal Motility issues, Arrhythmia caused by prolonged QT, acute Cholestatic hepatitis, Rash, eOsinophilia, increases serum concentrations of theophyllines-oral anticoagulants, Clarithromycin is embryotoxic
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Chloramphenicol
Blocks peptidyltransferase at 50s subunit: bacteriostatic Uses: meningitis (H. flu, N. meningitidis, S. pneumoniae) and rocky mountain spotted fever (rickettsia rickettsii) Limited use owing to toxicities but often still used in developing countries cause it's cheap. Toxicity: anemia (dose dependent), aplastic anemia (dose independent), gray baby syndrome (premature infants because they lack liver UDP-glucuronyl transferase) Resistance arises from: plasmid encoded acetyltransferase inactivates the drug
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Clindamycin
Blocks peptide transfer at 50s: bacteriostatic Uses: anaerobic infections (e.g. bacteroides spp. Clostridium perfringens) in aspiration pneumonia, lung abscesses, and oral infections. also effective against invasive group A strep infections. Toxicity: Pseudomembranous colitis (C diff overgrowth), fever, diarrhea
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Clindamycin vs metronidazole
Clindamycin: treats anaerobes above the diaphragm vs metronidazole which treats below diaphragm
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Sulfonamides
Sulfamethoxazole (SMX), sulfisoxazole, sulfadiazine Mechanism: inhibit folate synthesis, para-aminobenzoic acid antimetabolites inhibit dihydripteroate synthase. bacteriostatic Uses: gram +, gram -, Nocardia, chlamydia, triple sulfas or SMX for simple UTI Toxicity: hypersensitivity, if G6PD then hemolysis, nephrotoxic (tubulointerstitial nephritis), photosensitivity, kernicterus in infants, displaces other drugs from albumin Resistance arises from: altered enzyme (bacterial dihydropteroate synthase), decrease uptake, or increase PABA synthesis.
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Trimethoprim
inhibits bacterial dihydrofolate reductase, bacteriostatic Used in wombo combo with SMX, causing sequential blocking of folate synthesis. combination used for UTIs, Shigella, salmonella, pneumocystis jirovecii pneumonia treatment and prophylaxis, toxoplasmosis prophylaxis. Toxicity: megaloblastic anemia, leukopenia, granulocytopenia, (may alleviate with supplemental folinic acid)
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fluoroquinolones
-floxacin (like ciprofloxacin, moxifloxacin), and enoxacin, nalidixic acid Inhibts DNA gyrase (topo 2) and topo 4, bactericidal. Do not take with antacids cause the bind and prevent absorption Uses: gram - rods in urinary and GI tracts, pseudomonas, Neisseria, some gram + Toxicity: GI upset, superinfections, skin rashes, headache, dizziness, less commonly: tendonitis and rupture, leg cramps, myalgia. Can't use in pregnant or breast feeding women due to potential cartilage damage. can prolong QT, tendon rupture mostly in old people on prednisone
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Metronidazole
Forms free radical toxic metabolites in the bacterial cell that damage DNA, bactericidal, antiprotozoal uses: treats GET GAP: Giardia, Entamoeba, Trichomonas, Gardnerella vaginalis, Anaerobes (bacteriodes, c diff). part of triple therapy for h pylori. toxicity: disulfiram-like reactions(severe flushing, tachycardia, hypotension) w/ alcohol; headache, metallic taste
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Treatment and prophylaxis for: M tuberculosis
Prophylaxis: Isoniazid Treatment: RIPE (rifampin, Isoniazid, Pyrazinamide, Ethambutol)
439
Treatment and prophylaxis for: M. avium and M. intracellulare
Prophylaxis: azithromycin or rifabutin Treatment: Azithromycin or clarithromycin + ethambutol, can add rifabutin or ciprofloxacin More drug resistant than M tuberculosis
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Treatment and prophylaxis for: M leprae
No prophylaxis Treatment: Jesus daps you on the head or Dapsone and rifampin for tuberculoid form but add clofazimine for lepromatous form
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Isoniazid
Mechanism: decreased synthesis of mycolic acids, bacterial catalase-peroxide (encoded by KatG) need to convert INH to active metabolite Uses: M. tuberculosis, and the only agent used in prophylaxis for TB Toxicity: Neurotoxicity, Hepatotoxicity, Pyridoxine (B6) can prevent neurotoxicity, lupus
442
Rifamycins
Rifampin, rifabutin Inhibits DNA-dependent RNA polymerase uses: M tuberculosis, delays resistance to dapsone in leprosy, meningococcal prophylaxis and chmoprophylaxis in contacts of children with H influenzae type B Toxicity: minor hepatotoxicity and increase p450, orange body fluids, Rifabutin used over rifampin in patients with HIV infection due to less cytochrome p450 stimulation.
443
Pyrazinamide
mechanism: uncertain, thought to acidify intracellular environment via conversion to prazinoic acid. effective in acidic pH of phagolysosomes, where TB engulfed macrophages is found Clinical use: mycobacterium tuberculosis Toxicity: Hyperuricemia, hepatotoxicity
444
Ethambutol
Mechanism: decrease polymerization of mycobacterium cell wall by blocking arabinosyltransferase Uses: mycobacterium tuberculosis Toxicity: optic neuropathy (red-green color blindness)
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Antimicrobial prophylaxis for: endocarditis w/ surgical or dental procedures
penicillins
446
Antimicrobial prophylaxis for: Gonorrhea
Ceftriaxone
447
Antimicrobial prophylaxis for: History of recurrent UTIs
TMP-SMX
448
Antimicrobial prophylaxis for: Meningococcal infections
Ciprofloxacin is choice drug, rifampin for kids
449
Antimicrobial prophylaxis for: pregnant women carrying group b strep
Ampicillin
450
Antimicrobial prophylaxis for: prevention of gonococcal or chlamydial conjunctivitis in newborn
Erythromycin ointment
451
Antimicrobial prophylaxis for: Prevention of post-surgical infection due to S. aureus
Cefazolin
452
Antimicrobial prophylaxis for: Prophylaxis of strep pharyngitis in child with prior rheumatic fever
oral penicillin
453
Antimicrobial prophylaxis for: Syphilis
Benzathine penicillin G
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Antimicrobial prophylaxis for: HIV patient with
TMP-SMX to prevent pneumocystis pneumonia
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Antimicrobial prophylaxis for: HIV patient with CD4+ t cells
TMP-SMX to prevent pneumocystis pneumonia and toxoplasmosis
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Antimicrobial prophylaxis for: HIV patient with CD4+ t cells
Azithromycin to prevent mycobacterium avium complex
457
Treatment for MRSA infection
Vancomycin, daptomycin, linezolid, tigecycline, ceftaroline
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what side effect can linezolid cause
serotonin syndrome
459
treatment for VRE
Linezolid and streptogramins (quinupristin/dalfopristin)
460
Amphotericin B
Mechanism: binds ergosterol (unique to fungi) and form membrane pores that allow leakage of electrolytes Uses: serious systemic mycoses, cryptococcus, blastomyces, coccidioides, histoplasma, candida, mucor. Intrathecally for fungal meningitis. Give with K+ and Mg2+ because of altered renal tubule permeability Toxicity: fever, chills, hypotension, nephrotoxicity, arrhythmias, anemia, IV phlebitis. Hydration decreases nephrotoxicity, liposomal amphotericin decreases toxicity.
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Nystatin
Mechanism: same as amphotericin B. Topical for because it is too toxic for systemic use Use: swish and swallow for oral candidiasis; topical for diaper rash or vaginal candidiasis
462
Azoles
-azoles (fluconazole, ketoconazole, itraconazole.....) Mechanism: inhibit fungal sterol (ergosterol) synthesis by inhibiting p-450 that converts lanosterol to ergosterol UsesL local and serious systemic mycoses, fluconazole for chronic suprresion of cryptococcal meningitis in AIDS patients and candidal infections of all types. Itraconazole for blastomyces, Coccidioides, Histoplasma. Clotrimazole and miconazole for topical fungal infections. Voriconazole for aspergillus in immunocompromised. Toxicity: testosterone synthesis inhibitor (gynecomastia, esp. w/ ketoconazole, liver dysfunction (inhibits p450)
463
Flucytosine
Mechanism: inhibits DNA and RNA biosynthesis by conversion to 5-fluorouracil by cytosine deaminase Use: systemic fungal infections (esp. meningitis caused by cryptococcus) in combination with amphotericin B Toxicity: bone marrow suppression
464
Echinocandins
-fungin (Caspofungin, micafungin, anidulafungin) Mechanism: inhibits cell wall synthesis by inhibiting synthesis of beta-glucan. Uses: invasive aspergilloisis, candida Toxicity: GI upset, flushing (by histamine release)
465
Terbinafine
Mechanism: inhibits the fungal enzyme squalene epoxidase Use: Dermatophytoses (especially onychomycosis- finger and toe nails) Toxicity: GI upset, headaches, hepatotoxicity, taste disturbance
466
Griseofulvin
Mechanism: interferes with microtubule function; disrupts mitosis/ Deposits in keratin-containing tissues (e.g. nails) Uses: oral treatment of superficial infections; inhibits growth of dermatophytes (tinea, ringworm), Teratogenic
467
Antiprotozoan therapy for toxoplasmosis
Pyrimethamine
468
Antiprotozoan therapy for trypanosoma brucei
Suramin and melarsoprol
469
Antiprotozoan therapy for t. cruzi
nifurtimox
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Antiprotozoan therapy for leishmaniasis
sodium stibogluconate
471
Chloroquine
Mechanism: blocks detoxification of heme into hemozoin. Heme accumulates and is toxic to plasmodia. Uses: treatment of plasmodial species other than P. falciparum. For life threatening malaria, use quinidine in US or artesunate Toxicity: Retinopathy; prurititus (Especially in dark-skinned individuals)
472
Treatment for P falciparum
do not use chloroquine (frequency of resistance in P falciparum is too high). resistance due to membrane pump. Treat falciparum with artemether/lumefantrine or atovaquone/proguanil.
473
Antihelminith therapy
Mebendazole, pyrantel pamoate, ivermectin, diethylcarbamazine, prazinquantel Works to immobilize helminths. Use praziquantel against flukes (trematodes) such as Schistosoma
474
Zanamivir, oseltamivir (-mivir)
antiviral Mechanism: inhibit influenza neuraminidae leading to decreases in the release of progeny virus Uses: treatment and prevention of influenza A and B
475
Ribavirin
antiviral Inhibits synthesis of guanine nucleotides by competitively inhibiting inosine monophosphate dehydrogenase toxicity: hemolytic anemia, severe teratogen
476
Acyclovir, Famciclovir, valacyclovir
Mechanism: monophosphorylated by HSV/VZV thymidine kinase and not phosphorylated in uninfected cells (so less side effects). Guanosine analog. Triphosphate formed by cellular enzymes. Preferentially inhibits viral DNA polymerase by chain termination Toxicity: Obstructive crystalline nephropathy and acute renal failure if not hydrated
477
Ganciclovir
Mechanism: 5' monophosphate formed by a CMV viral kinase. Guanosine analog. Triphosphate formed by cellular kinases. Preferentially inhibits viral DNA polymerase Uses: CMV, especially in immunocompromised patients. Valganciclovir, a prodrug of ganciclovir, has better oral bioavailability Toxicity: leukopenia, neutropenia, thrombocytopenia, renal toxicity. more toxic to host enzymes than acyclovir Resistance comes from mutated CMV DNA polymerase or lack of viral kinase
478
Foscarnet
Mechanism: viral DNA polymerase inhibitor that binds the pyrophosphate-binding site of the enzyme. Does not require activation by viral kinase Uses: CMV retinitis in immunocompromised patients when ganciclovir fails; acyclovir resistant HSV Toxicity: nephrotoxicity Resistance comes from mutated DNA polymerase
479
Cidofovir
Mechanism: preferentially inhibits viral DNA polymerase. Does not require phosphorylation by viral kinase. Uses: CMV retinitis in immunocompromised patients; acyclovir resistant HSV. long half life Toxicity: nephrotoxic (given with probenecid and IV saline to decrease toxicity)
480
HIV therapy overview
HAART: highly active antiretroviral therapy: given when patient presents with AIDS-defining illness, low CD4 count(
481
Protease inhibitors
-Navir tease a protease Mechanism: assembly of virions depends on HIV-1 protease (pol gene), which cleaves the polypeptide products of HIV and mRNA into their functional parts. Thus, protease inhibitors prevent maturation of new viruses. Ritonavir can boost other drugs concentrations because it blocks p450 Toxicity: hyperglycemia, GI intolerance, lipodystrophy, Nephropathy, hematuria (indinavir)
482
NRTIs: name them
Abacavir, emtricitabine, lamivudine, stavudine, tenofovir, Zidovudine, and Didanosine The magician did all the tricks and voodoo for the ten people
483
NRTIs: mechanism
Competitively inhibit nucleotide binding to reverse transcriptase and terminate the DNA chain (lack a 3' OH). Tenofovir is a NucleoTide and all the others are nucleosides and need to be phosphorylated. Zidovudine is used for general prophylaxis and during pregnancy to decrease risk of fetal transmission
484
NRTIs: Toxicity
Bone marrow suppression (reversed w/ granulocyte colony stimulating factor and erythropoietin), peripheral neuropathy, lactic acidosis (nucleosides), rash (nucleosides), anemia (zido), pancreatitis (didanosine)
485
NNRTIs: Names
Efavirenz, Nevirapone, Delavirdine | Do a nerdy a favor and travel to Nevada and Delaware.
486
NNRTIs: Mechanism
bind reverse transcriptase at site different from NRTIs. Do not require phosphorylation to be active or compete with nucleotides.
487
NNRTIs: Toxicity
Rash and hepatotoxicity. Vivid dreams and CNS symptoms are common with efavirenz. Delaviridein and efavirenz are contraindicated in pregnancy.
488
Integrase inhibitor
Raltegravir (tegra) Inhibits HIV genoma integration into host cell chromosome by reversibly inhibiting HIV integrase Toxicity is hypercholesterolemia
489
Fusion inhibitors
Enfuvirtide (ENFUsion inhibitor), Maraviroc (CCR is a rock band) Mechanism: enfuvirtide binds gp41 inhibiting entry, maraviroc is a CCR-5 binder on the surface of t cells/monocytes, inhibiting interaction with gp120 Toxicity: skin reaction at injection site
490
Interferons (the drug, not the natural form)
Mechanism: glycoproteins normally synthesized by virus-infected cells, exhibiting a wide range of antiviral and antitumoral properties Uses: IFN-alpha-chronic hepatitis B and C, Kaposi sarcoma, hairy cell leukemia, condyloma acuminatum, renal cell carcinoma, malignant melanoma. IFN-beta: Multiple sclerosis IFN-gama: chronic granulomatous disease Toxicity: Neutropenia, myopathy
491
Name the antibiotics to avoid in pregnancy
SAFe Children Take Really Good Care | Sulfonamides, Aminoglycosides, Fluoroquinolones, Clarithromycin, Tetracycline, ribavirin, Griseofulvin, Chloramphenicol
492
Traveler's diarrhea
E coli, shigella, campylobacter are the most common cause | treat with fluoroquinolone (most ciprofloxacin)
493
Bartonella henselae
Cat scratch fever; Only affects immune compromised and pregnant; regional lymphadenopathy with stellate granulomas on biopsy of lymph nodes; fever alternating with chills is commona
494
All DNA viruses are icosahedral except
Poxvirus family
495
All DNA viruses replicate in the nucleus except
Poxvirus family
496
Lipid A
is part of the LPS of gram negative bacteria. It is the most toxic portion of LPS. Causes release of IL-1 and 6, TNF.
497
Burn patients with necrotic lesions. What bug.
pseudomonas aeruginosa (gram negative rod, oxidase positive, has exotoxin A that inhibits EF-2 like diphtheria)
498
Lysogenic conversion
lysogenic conversion makes it so exotoxins of bacteria can cause their symptoms. Only certain bacteria need to do this. COBEDS is the way to remember: Cholera toxin, O antigen of Salmonella, botulinum toxin, Strep pyogenes toxin, Diphtheria toxin, Shiga toxin
499
Brucella abortus
Get undulant fever (spiking high fevers with sweats that come and go); chronic infection in nature; think unpasteurized milk and cheese or people who work with cattle.
500
In a female patient with a IUD placed and an infection think....
Actinomyces israelli; gram positive rod anaerobic rod, makes yellow sulfur granules, causes cerviocfacial, female reproductive and GI infections.
501
Hantavirus
think SW USA, exposure to rodent poop, and has acute respiratory distress
502
Causes of impetigo
Strep Pyogenes (honey crusted lesions) or Staph aureus (blister like lesions)
503
Dermacentor tick trasmitts what
Rickettsia (RMSF) and tularemia
504
Schuffner dots tell you what
Plasmodium Vivax or Ovale malaria; they are round bodies inside of infected erythrocytes.
505
Tonsillar abscess, how should you treat?
Likely a gram negative rod so give them some clindamycin (50s inhibitor)
506
Needle stick injury in the US is most likely to give you what disease
Hep C