week 2 - long term potentiation Flashcards

1
Q

Describe Morice et al. (2008) Learning and memory study

A

mice with a downsyndrome model vs wild type

Mice with downsyndrome have less synaptic plasticity

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2
Q

Where is the hippocampus?

A

In the medial temporal lobe

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3
Q

What is another reason why the hippocampus is widely studied in learning and memory

A

Because it is very easily accessed electrophysiologically

You can even remove it from the brain and it’ll stay alive for much longer than other areas

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4
Q

What is anterograde amnesia

A

Inability to form new memories

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5
Q

What is retrograde amnesia

A

Loss of old memories

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6
Q

Describe HM

A

A:
H.M. (Henry Molaison) had his medial temporal lobes, including the hippocampus, surgically removed to treat epilepsy. After surgery, he developed severe anterograde amnesia—he could not form new long-term memories, though his intelligence, short-term memory, and procedural memory remained intact.

His case provided strong evidence that the hippocampus is critical for forming new declarative (episodic and semantic) memories, but not for retrieving old ones or learning motor skills, showing that different types of memory rely on different brain systems.

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7
Q

What is an intepretation of the fact that most hippocampal damage leads to amnesia of recent memories or new memories

A

Memories might start off in the hippocampus and move elsewhere

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8
Q

Describe frankland and bontempi (2005) ‘s study on hippocampal lesions

A

Hippocampal lesions impair memory in rodents in a time dependent way

Memory created in rodents. , This was
either using classical contextual fear conditioning and social transmission of food preference

When hippocampus is lesioned soon after the memory is created the memory is lost

When hippocampus is lesioned after a month after the memory, the memory is generally not lost

This suggests that memories start in the hippocampus and move elsewhere.

This is consistent with the observation that H.M. has retrograde amnesia for events that occurred recently, but not in the more distant past.

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9
Q

What do human and animal studies reveal about the hippocampus and memory consolidation?

A

Damage to the medial temporal lobe in humans causes temporally graded retrograde amnesia, affecting recent but not remote memories, suggesting the hippocampus has a time-limited role in memory storage. This supports systems consolidation theory, where the hippocampus temporarily stores new memories, which are gradually transferred to distributed cortical networks through reactivation and synaptic changes.

Animal models allow controlled studies of lesion effects, confirming that recent memories are more vulnerable to hippocampal disruption. Imaging and lesion studies show that over time, memory traces shift to cortical areas, especially the prefrontal cortex, which helps integrate information and may inhibit hippocampal re-encoding during recall.

In contrast, multiple trace theory argues that the hippocampus is always needed for recalling episodic and spatial details, regardless of memory age. Overall, memory reactivation (during tasks or rest/sleep) is key to gradual remodelling of hippocampal–cortical circuits, stabilising long-term memory.

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10
Q

Describe Neves, Cooke and Bliss’s study into hippocampus circuitry

A

Most the input to the hippocampus comes into the dentate gyrus, flows to CA3 and flows to the hippocampus

The flow of information into the hippocampus in rodents is very simple

This is another reason why the hippocampus is a widely studied structure

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11
Q

How can you differentiate synaptic potentials and action potentials in the hippocampus in rodent hippocampal studies

A

Use a simple lamination (research more about this)

Because the hippocampus is simple, you can interpret what is synaptic vs. what is hippocampal, as well as being able to visualize the discrete fibre pathways

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12
Q

Describe a transverse hippocampal slice and why is this better in the hippocampus

A

You can look down at a slice of the rodent hippocampus and see the structure of the neural pathways

You can see what’s CA1, CA3 and you can stimulate different bits

This is better in the hippocampus cus in other brain areas the pathways cross over each other so you can’t isolate the different responses

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13
Q

What predictions would hebbian plasiticty theory generate / Criteria for a hebbian implementation of plasticity

A

Activity dependence - Modification of synsapses requires co-activity between pre and post synaptic neurons

input specifity- only inputs co-active with the post synaptic cell will undergo modification

Cooperativtiy - Multiple inputs are required to drive plasticity inducing post-synaptic depolarization

Associativity - Weak inputs that are unable to depolarize the cell sufficiently enough, will still undergo change if paired with strong depolarizing inputs

Longetivty - Phenomenons should be long-lasting if they are going to serve memory

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14
Q

Describe intracellular vs. extracellular recording and benefits

A

Intracellular - inside the neuron. EPSP’s can be measured
Benefits = low noise recording from individual neurons

Extracellular - Away from the neuron e.g eeg

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15
Q

How does the steepness of the EPSP slope correlate with synaptic strength?

A

The steeper the slope of the EPSP field recording, the stronger the population synapses

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16
Q

Describe Bliss and Lomo’s 1973 LTP study

(Q1- Activity dependence)

A

Looked in the dentate gyrus recieving input
Recorded from a population of excitatory neurons in a aneastetised rabbit

One neuron stimulated and one recorded in each hemisphere

One hemisphere recieved high frequency electrical stimulation, the other recieved low frequency control pulses

Only the hemisphere that has been stimulated undergone LTP, shown by A reduction in the latency of the population spike

LTP was measured as the field EPSP

This shows high frequency stimulation were required for increased synaptic strneght

This also shows that plasticity is activity dependent

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17
Q

How would you use intracellular recording to measure LTP (markram, 1997)

Q1 - Activity dependence

A

You can use spike timing dependent plastictiy

Stimulate with a single pulse the presynaptic input at the same time injecting the post synaptic neuron with current

If the presynaptic input is stimulate just before teh post synaptic cell we get a long term potentiation

The close the two stimulatoins are to being simultaneous, the stronger the LTP

Stimulating the post synaptic neuron first before the pre neuron leads to LTD - weakening of synapses

This shows timing of stimuli is important for LTP

This also shows activity is activity depndent

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18
Q

Q: What did Markram and Poo discover about spike timing-dependent plasticity (STDP), and how was it shown using intracellular recordings?

A

Using intracellular recordings, Markram and Poo showed that synaptic strength depends on the precise timing of pre- and post-synaptic firing, demonstrating spike timing-dependent plasticity (STDP).

Instead of using a high-frequency tetanus, they paired single synaptic stimuli with controlled post-synaptic firing at different time intervals. They found that:

If the pre-synaptic neuron fired just before the post-synaptic neuron (within ~50 ms), LTP occurred.

If the pre-synaptic neuron fired after the post-synaptic neuron, LTD occurred.

This confirmed Hebb’s idea that causal timing between neurons matters for plasticity, and revealed that STDP reflects a natural, timing-based form of Hebbian learning.

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19
Q

How would you demonstrate input specifity for synaptic plasticiy (beck et al, 2000)

(Q1 - Input plasticity)

A

tetanised vs. non tetanised input

In LTP experiments, only the synaptic pathway that receives tetanic stimulation shows a long-lasting increase in synaptic strength (black dots), while a separate, untetanized pathway onto the same neuron remains unchanged (white circles).

This shows input specificity, meaning only active synapses are strengthened, not all inputs to a neuron. This specificity confirms that LTP is a synapse-specific process, not a global change in the neuron, and serves as a control showing that observed changes are due to actual synaptic plasticity, not experimental artefacts like electrode drift.

This supports Hebb’s rule: “only synapses that contribute to post-synaptic activation are strengthened.”

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20
Q

What did Beck et al. (2000) show about input specificity in LTP?

A

Beck et al. (2000) used dual-pathway stimulation in hippocampal slices to show that LTP is input-specific. They stimulated two independent synaptic inputs onto the same post-synaptic neuron, delivering high-frequency tetanic stimulation to only one of them.

They found that only the tetanized pathway showed long-term potentiation, while the untetanized pathway remained unchanged, confirming that LTP only occurs at synapses that are active during induction.

This provided strong evidence for input specificity, a core property of Hebbian synaptic plasticity, and showed that synaptic changes are localised, not global across the neuron.

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21
Q

What is the two pathway preperation in the transverse hippocampal slice?

A

The two-pathway preparation involves stimulating two independent sets of synaptic inputs onto the same population of neurons (typically CA1 pyramidal cells) in a transverse hippocampal slice.

One pathway (e.g., via Schaffer collaterals) is given high-frequency tetanic stimulation to induce LTP, while the other is left unstimulated as a control.

This setup is used to demonstrate input specificity—showing that only the stimulated pathway exhibits synaptic strengthening, while the control pathway remains stable+

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22
Q

How would you demonstrate cooperativity and associativity in hebbian plasticity (Q1)

(McNaughton et al, 1978) Mcnaughton, 2003,

Barrioneuvo and brown, 1983

A
  1. Cooperativity – McNaughton et al., 1978 (revisited in McNaughton, 2003):

Preparation: Transverse hippocampal slice; Schaffer collateral inputs stimulated; recordings from CA1 pyramidal neurons.

Experiment: A single weak input (subthreshold stimulation) was unable to induce LTP on its own. However, when multiple weak inputs (from separate fibres) were stimulated simultaneously, they summated and induced LTP.

Conclusion: This showed that LTP induction requires coincident activity across multiple inputs to reach the depolarisation threshold necessary for NMDA receptor activation. This is cooperativity: “weak inputs must cooperate to induce lasting change.”

23
Q

How would you demonstrate associvity in hebbian plasticity?

A

Associativity – Barrionuevo & Brown, 1983:

Preparation: Again, hippocampal slice; CA3–CA1 two-pathway stimulation to separate inputs onto the same CA1 neuron.

Experiment: One pathway received strong high-frequency stimulation (tetanus) to induce LTP. The second, weak pathway, was stimulated at a low frequency, which on its own would not induce LTP.

When the weak pathway was stimulated simultaneously with the strong pathway, LTP was also induced in the weak input.

Conclusion: This demonstrated associativity — a weak input becomes potentiated if it is co-active with a strong input, because the strong input depolarises the postsynaptic cell enough to relieve the Mg²⁺ block of NMDA receptors at the weak synapse, allowing Ca²⁺ influx and synaptic strengthening.

24
Q

How would you measure longetivity in hebbian plasticity (Q1)

Abraham et al 2002

A

Induced LTP in dente gyrus of rat by many stimulations

LTP lasted for 100 days in a rat

LTP even lasted for one rat 360 days, this is half of the rats life

To demonstrate longevity, researchers induce LTP and then show that synaptic strengthening persists for days, weeks, or even months. This typically requires chronic in vivo recordings in awake, behaving animals.

Abraham et al. (2002):

Used chronically implanted electrodes in the dentate gyrus of awake rats.

Applied high-frequency stimulation (HFS) to the perforant path to induce LTP.

Recorded field excitatory postsynaptic potentials (fEPSPs) over many days to weeks after induction.

Found that LTP persisted for at least 1–2 weeks, showing that synaptic strengthening can be long-lasting and stable under naturalistic conditions.

Conclusion: This provides strong evidence that LTP is not just a short-term phenomenon, but can serve as a candidate mechanism for long-term memory storage, satisfying the longevity criterion of Hebbian plasticity.

25
What is the relationship between protein synthesis and LTP Scharf et al, 2002 provided evidence, describe
Protein synthesis Scharf et al found that if you block protein synthesis, LTP only lasts for an hour then returns back to baseline If you don't block protein synthsis, LTP is long lasting
26
What is the synaptic tagging hypothesis Frey and morris 1998
New proteins get synthesised becasue genes are being expressed However, because plasitcity is neuron specific, how do you ensure that the proteins only go to the relavent neurons? Synaptic tag hypothesis = Porteins get sent out all throughout the neuron, but you have a tag/binding partner at the synapses that have recently undergone change
27
WHat is the stages of LTP
Induction - the moment of change when the tetanus has been delivered, steep EPSP slope Expression - Something in the synapse has changed Maintenence - Maintenence of the synapse strength
28
What is the mechaism that detects induction (the special condition at which hebbian plasticity occurs) in glutamate synapses
The NMDA receptor is nessercary for the induction of LTP Most synaptic potential comes in through AMPA receptors (in glutamatergic synapses) NMDA is voltage gated meaning it only opens at a particular voltage. Normally magnesium is blocking the receptor but when theres enough voltage the magnesium leaves allowing a sharp influx of positively charged calcium ions
29
described NMDA receptors in resting and weakly stimulated vs strongly stimulated synaptes. (detecting expression) How is this discovered experimentally
resting state = nmda closed Weakly stimulated = nmda closed Strongly stimulated = nmda opens Experimentally, you can use drugs to block the different receptors and look at the effects
30
Describe dual gating
AMPA receptors are ligand-gated ion channels that open when glutamate binds, allowing fast excitatory synaptic transmission. NMDA receptors, however, require two conditions to open: Glutamate binding, and Depolarisation of the post-synaptic membrane. This is because a Mg²⁺ ion blocks the NMDA receptor’s pore at resting potential and is only expelled during membrane depolarisation, making the NMDA receptor both ligand- and voltage-gated. This dual gating makes NMDA receptors ideal coincidence detectors for Hebbian plasticity, opening only when pre- and post-synaptic activity coincide. Electrophysiological recordings show a fast AMPA response followed by a slower NMDA response. Drugs that selectively block each receptor have been crucial for studying their roles in LTP induction.
31
Describe collingridge et al (1983) NMDA receptor antagonist experiment (ltp expression)
Used a drug AP5 into the cell bath whilst LTP was being induced ap5 is a NMDA receptor antagonist When ap5 was in bath, ltp didnt take place When ap5 was washed away, ltp could take place This shows that ap5 is nmda receptor dependent
32
Describe effects of NMDA antagonist on morris water maze performance Morris et al, 1986 (ltp maintence)
When NMDA antagonists are used (injecting ap5 into hippocampus), performance on the morris water maze is strongly impaired This shows that ltp is nmda dependent It also shows that morris water maze performance is dependent on LTP ------------------ Richard Morris developed the Morris water maze, a test of spatial learning in which rats learn to find a hidden platform in a pool using external spatial cues. He showed that lesions to the hippocampus impair the ability to learn the task, proving that spatial memory is hippocampus-dependent. Building on this, Morris tested whether blocking NMDA receptors, which are crucial for LTP induction, would also impair learning. He found that NMDA receptor antagonists blocked spatial learning in the maze, just as they block LTP. This supported the hypothesis that LTP (via NMDA receptor activation) is a key cellular mechanism for learning and memory.
33
How can AMPA receptors influence synaptic strength
AMPA receptors are ionotropic glutamate receptors that carry most of the synaptic current during glutamatergic transmission. They can be post-translationally modified, e.g. via phosphorylation, which increases their conductance to sodium without changing receptor number. In the short-term, phosphorylation enhances synaptic strength by improving ion flow. In the long-term, LTP involves an increase in AMPA receptor number at the synapse. AMPA receptors are dynamically regulated through endocytosis (removal) and exocytosis (insertion). A sustained increase in synaptic AMPA receptors is a key mechanism for long-lasting LTP expression.
34
Describe the dominant negative way to interfere with ampa insertion
A dominant negative approach is used to interfere with AMPA receptor insertion. A peptide mimicking the cytoplasmic tail of the GluR1 (GluA1) subunit is fused to green fluorescent protein (GFP) to track its movement. This peptide blocks normal GluR1 insertion by outcompeting endogenous receptors for the exocytosis machinery. It is delivered to neurons via viral expression in mice. This method tests whether inserting GluR1-containing AMPA receptors into the post-synaptic membrane is required for LTP expression
35
Describe Rumpel et al 2005 study on AMPA and LTP
Rumpel et al. (2005) showed that AMPA receptor insertion is necessary for LTP expression. They used a dominant negative GluR1 (GluA1) subunit to block receptor insertion into the post-synaptic membrane in vivo. By expressing this mutated GluR1 tail using viral vectors in the rat amygdala, they found that: LTP could not be induced in neurons expressing the dominant negative construct. Fear conditioning, a form of learning that relies on LTP, was also impaired. Conclusion: This study provided strong causal evidence that the insertion of GluR1-containing AMPA receptors into synapses is a key mechanism for LTP expression and memory formation.
36
What is an inhibitory avoidace test
Uses operant conditioning Mice have two compartment, one well lit and one dark They want to go in the dark but they get a shock when they go in the compartment If they stay in the light then they have a powerful memory of the electric shop. Therefore, the length memory that stops them from entering the dark is can be used as a measure of LTP
37
Describe mitsushima et al,s 2011 study
Mitsushima et al. used a viral vector to express a dominant negative GluR1 C-terminal (GluR1-CT) construct fused with GFP in the CA1 region of the rat hippocampus. This construct blocked endogenous AMPA receptor insertion by interfering with the machinery needed for GluR1 trafficking. In a passive avoidance task, rats expressing the GluR1-CT-GFP construct showed impaired memory, entering the dark compartment quickly. In contrast, control rats expressing GFP alone displayed normal memory, taking longer to enter the dark compartment. Conclusion: This experiment provided strong evidence that activity-dependent insertion of GluR1-containing AMPA receptors is a key mechanism for LTP expression and is essential for long-term memory formation.
38
Describe PKMzeta as a mechanism for maintenence sacktor, 2011
By phosphorylating ampa receptor you can change their conductance PKMzeta is a consituent of a kinase that phosphorylates if pkm is translated into being a functional kinase, it interacts with ampa insertion mechanisms to promote the insertion of ampas Most synampses translationally repress PKM. When NMDA is activated and LTP occurs, the block of translation of PKM is lifted This leads to a positive feedback loop where it supresses the blockade so the maintanence mechanism is continually being expressed at the synapse
39
Describe pastalkovaa et al 2006 study on pkmzeta and rat memory task (for LTP maintence)
PKMzeta is required for hippocampus dependent memory PKMζ is a constitutively active isoform of protein kinase C (PKC) that is translated during LTP induction. Under resting conditions, its mRNA is present but not translated due to inhibition by PIN1. When calcium enters via NMDA receptors, it activates signalling pathways that lift this translational block, allowing PKMζ to be produced. Once active, PKMζ: Promotes AMPA receptor insertion at active synapses (supporting LTP expression), and Inhibits PIN1, reinforcing its own continued synthesis. Conclusion: PKMζ creates a self-sustaining feedback loop that maintains synaptic strength long after the original calcium signal, making it a strong candidate for a molecular mechanism of LTP maintenance (Sacktor et al.). PKCzeta contains both a regulatory and a catalytic domain, so that it is maintained in a closed, inactive state. However, it can be activated by calcium and other factors, which changes its conformation and releases the regulatory domain, allowing the kinase to phosphorylate key substrates. By contrast, PKMzeta only has a catalytic domain, so that it is constitutively active and always acting on substrates – including in the insertion of AMPA receptors. The Sacktor lab designed an inhibitory peptide that specifically targets the catalytic domain of PKMzeta – know as zeta inhibitory peptide or ZIP – to serve as an experimental tool to inactivate PKMzeta after LTP induction. By delivering this inhibitory peptide ZIP to the hippocampus after LTP had been induced, Sacktor and colleagues were able to reverse long-established LTP. Here, you can see that LTP in the dentate gyrus of a living rat is sustained for 22 hours before the ZIP is applied. Within a very short period, the LTP falls to baseline levels, demonstrating that PKMzeta is a key LTP maintenance mechanism.
40
Evidence memory maintenence also requires PLMzeta
Sacktor and colleagues used an active avoidance task, where rats learn to avoid a shock zone on a rotating disk—a form of operant conditioning. After learning, rats showed strong, persistent memory of the shock zone. However, when the PKMζ inhibitor ZIP was infused into the hippocampus 24 hours after learning, the memory was erased, and rats no longer avoided the shock zone. This effect has been replicated across various hippocampus-dependent tasks, suggesting that PKMζ is essential for maintaining long-term memory. Conclusion: These findings support the idea that PKMζ is a critical molecular mechanism for the maintenance of LTP and memory, and that disrupting it can erase established memories.
41
describe Whitlock et al 2006 - learning induced synaptic potentiation occludes LTP
In this study, multiple electrodes were placed in CA1 of the hippocampus, and Schaffer collaterals were stimulated to measure synaptic strength before and after learning. After inhibitory avoidance (IA) training, many electrodes recorded synaptic potentiation, shown as hot colours—indicating LTP occurred at specific sites. Control groups (e.g. shocked without IA, walk-through without shock, and homecage) showed no significant potentiation, confirming that LTP was linked to learning, not to shock or exploration alone. Not all synapses showed potentiation—some even weakened—suggesting that LTP is synapse-specific and experience-dependent. Conclusion: This provides strong in vivo evidence that behavioural learning induces hippocampal LTP, supporting the idea that LTP is a physiological mechanism underlying memory formation.
42
what are negative symptoms of schizohprenia?
Emotional, social withdrawal and anhedonia
43
describe dendritic spines in schizophrenia
Reduction in dendritic spines in pyramidal neurons (Glanz and Lewis, 2000) However these are post mortem studies so we don't know if its cause or consequence
44
How does PET image synapses in the live human brain?
A PET ligand called UCB binds to synaptic vescicle protein 2A which allows you to globally image synapses (go over this, maybe ask chat gpt)
45
What has PET imaging shown us about synapses in schizophrenia Give criticicisms
Individuals with schizophrenia show lower levels of pre-synaptic protein SV2 This does not give us single synapse resolution, so we cannot look at the level of the synapse. Also because the individuals are alive, we cannot get much in the way of mechanistic insight
46
What evidence is there that links the genetics of schizophrenia with synaptic dysfunction?
Sullivan et al, 2012 Scz inividuals show gene variants which lead to altered gene expression, which leads to abberant cellular physiology, which leads to abnormal synaptic connectivity, which leads to abnormal circuit function. - very large studies with hundreds of thousands of individuals (GWAS, axome studies) - GWAS look for SNP's which are statistically more common in scz. This has allowed us to identify over 250 genetic variants that seem associated with the diagnosis. However they are quite weak, only increase risk of scz <1% - Axome studies look for deletions and insertions at the chromosomal level and try to associate it with scz. Particular variants have been found e.g deletions in neuraxin 1 gene which codes for a synaptic adhesion protein. These variants are high penetrant but rare, meaning few have it but if you do then the risk is high If you look at the function of a lot of the genes associated with scz, a lot of them encode for proteins that are found at synapses.
47
can animal models model scz?
PROS - you can modify genes associated with scz to see the impact on behaviour - Behavioural assays of scz symptoms are easy to conduct - Its easy to target specific cell types and neural circuits involved in schizophrenia CONS - We cannot recapitulate the complex genetic backgrounds associated with scz. E.g it is likely that a combination of rare as well as common variants contribute - Gene disruption does not always completely mimic human genetics, e.g a knockout does not always relate to the human mutation - were working with mice not human neurons - Not easy to ask mice if they are experiencing auditory hallucinations
48
Describe Stem cell models of synaptic dysfunction in scz
- these can investigate synaptic dysfunction in scz in HUMAN neurons - adult somatic cells can be reprogrammed into Induced pluripotent stem cells (iPSC's) which can be turned into neurons - The cells retain the genetic makeup of the original human, so we can compare neuron cells from scz with healthy controls. - You can do various studies with these cells, e.g compare physiological functioning, treat cells with drugs APPROACHES TO IPSC's - Generate patient derived IPSC lines and use these to study the underlying neurobiology. CONS -
49
Describe patient derived IPSC approach in studying SCZq study
Brennand et al, 2011 They used a microarray to assess how many genes were expressed differently between patient and control lines. Nearly 600 genes were differently expressed, 25% of the dysregulated genes were associated with SCZ They then compared the number of neurites that came out of the cell body in SCZ and Healthy neurons. SCZ iSPC's showed fewer neurites than controls. They also showed lower levels of synaptic protein PSD95, suggesting that the patient neurites were making fewer synaptic connections They confirmed that the patient cells were making fewer synaptic connections by tracing synpatic connections. HOWVER, the was significant variation, regradless of HC or SCZ HOWEVER - There was a lot of individual variability, even within the control lines - This meaning that whilst it showed that stem cells can recapitualite some aspects of the disorder, it did offer insight into underlying pathophysiology
50
Describe advantages and disadvatnages of the Patient Derived ISPC approach
ADV - captures complex genetic background - Donors have same known diagnosis - allows modelling of genetic interactions DISADV - Hetergeneous genetic background due to different individuals - Subtle/Gene specific phenotypes could be missed - Large number of lines needed
51
Describe the isogenic ISPC approach to understanding differences in SCV.
E.g McTague et al, 2021 - You introduce mutations or deletions in ISPC's to create isogenic neurons using gene editing, to geneticallyl correct mutations in the patient line - This mean you have a corrected isogenic control, a patient line, and a healthy control line - You can then conduct functional assays, Assesment of cellular dysfunction and degeneration and transcriptional analysis to identify disease phenotypes in patient vs. isogenic cells
52
Give an example of the isogenic IPSC approach
Wan et al (2014) - identified a family where two sons had different disorders. One had schizophrenia and the other had major depression - Both of them carried an identical genetic mutation (4 base pair deletion) in the DISC1 gene - Generated IPSC's from the sons and family members without the deletion and healthy non family member. - proved that this deletion caused a frame shift in the c-terminal leading to an 80% loss of expression of the DISC1 protein - THey carried out some experiments. - They found that the original neurons from the sons had reduced levels of SV2a which is a synapse marker, suggesting they had a smaller number of synapses. - Electrophysiological studies also found reduced EPSC amplitude, indicative of reduced synapse formation - In the patient isogenic cells, they used gene editing to correct the 4 base pair deletion by re-introducing the base pairs - In the healthy isogenic cells, they INTRODUCED the DISC1 mutation - The isogenic patient cells DID NOT show the reduced levels of synapses that the original patient cells shpwed. - The healthy isogenic cells with DISC1 mutation DID show reduced levels of synapses. - This shows by introducing the mutation you can cause the phenotype, and by correcting the mutation you can rescue the phenotype
53
What are advantages and disadvantages of the isogenic approach
ADV. - Allows for study of gene function in isogenic genetic background - few cell lines needed - can engineer point mutations or deletions - can link genes directly with cellular/molecular processes DISADV. - Single gene unlikely to be responsible for a complex genetic disorder - Multiple genes with disease associated variants may interact - Naturally occuring variant may only subtely impact gene function
54
What kind of neurons do we get from IPSC's?
Brennand et al (2014) - Compared gene expression between neural progenitor cells with differentiated neurons derived from IPSC's -