week 8 - memory reconsolidation and consolidation Flashcards

1
Q

LEARNING OBJECTIVES (possible essay question topics)

A
  • Explain the difference between synaptic and systems memory consolidation
  • Can memory be modulated
  • Discuss the requirement of gene transcription and protein synthesis for memory consolifation
  • Discuss the regulation of immediate early genes for memory consolidation
  • Discuss studies of engram cells
  • Discuss models of remote memory storage
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2
Q

What is the concept of engrams?

A

Memories are stored by a subset of neurons in the brain, each set of neurons for a particular memory are called engrams

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3
Q

Outline evidence that STM and LTM are independent processes that run in parralel

A

McGaugh science 2000

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4
Q

Outline the two different types of memory consolidation:

A

Synaptic consolidation:
- transformation of information into synaptic nodes in the circuit that encodes memory.
- Typically concludes within hours of initidation

Systems consolidation:
- Post learning, time dependent reconsolidation of LTM over distributed brain systems
- sleep plays a role in this

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5
Q

What is the point of memory consolidatoin and how is it modualted

A
  • some memories arent relavent to us
  • It is modulated by the arousal system, if you have an involement of stress hormones this activates the amygdala which influences memory consolidation
  • Read McGaugh science 2000
  • Found that amygdala activation modulates memory consiolidation in various brain regions including the hippocampus
  • injected amphetamine in different brain regions. When they injected amphetamine in the amydgala memory was improved
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6
Q

Describe evidence that memory consolidation requires protein synthesis

A

Bourtchouladze et al 1998

gave mice anisomycin (blocker of protein synthesis) after fear conditioning training.

READ THIS PAPER: lots of different things happened with anisomycin at different times and i dont understand

SUGGESTS:
There a windows of gene transcription and protein synthesis required for consolidation

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7
Q

What are the regulators of gene transcription for memory consolidation

A

CREB - Read Bourtulazde et al IMPORTANT PAPER 1994
-CREB is a transcription factor that binds to gene CRE’s. Once creb binds to the genes then you get transcription.
In order to induce transcription CREB needs to be phosphorylated. This happens because of CAMK4
-Bourtulazde showed creb was essential for memory consolidation, because they knocked out creb from mice, gave them fear conditioning, knockout mice didn’t freeze.

TRANSIENT EPIGENETIC REGULATION
- Read Tsankova et al (2007)
- Histone modifications regulate the access for transcription
- For 1 hr after fear conditioning histone 3 gets phosphorylated and acetylated (check), which unwinds the DNA which makes transciption possible which makes memory consolidation possible

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8
Q

Which genes are regulated for memory consolidation.

Also: Evidence of neural markers of Engram cells

Are Engram cells NESSERCARY for a memory?

A

Immediate early genes
These are genes that respond immediatly to a stimulus
These are mostly either transcription factors or ‘effector’ genes
In particular, c-FOS is a transcription factor gene that is a marker for memory consolidation
BDNF is an effector gene that once transcribed, alters a synapse

Radwanska et al 2011 found out which IEG are being produced, by using neuroimaging during memory consolidation.
cFOS were produced by the hippocampus and the amygdala, which suggests that cFOS can be a marker for memory engrams

After conditioning, some cells in the hippocampus produce much more cFOS. Mutant animals that cant learn because they can’t produce CAMK2, don’t have this effect of increased cFOS suggesting it is imoortant in memory, and might be evidence of engrams.

How to tell if its evidence of engrams?:
- Read Josselen and Tonegawa (2020)
- Ablation study that showed that IEG’s label engrams (if you ablate the engram cell it erases the memory)

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9
Q

how to tell if engram cells are SUFFICIENT to get a memory?

A

Can you get a false memory by activating engram cells?

Josselyn and Tonegawa (2020)
- read up on this study and overview
- managed to produce a false memory that caused freezing by activating the engram cells

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10
Q

Stages of engram cells in memory consolidation

A
  • during memory encoding only a subset of neurons are activated
  • These proteins undergo synaptic consolidation that involves gene transcription
  • The memory is retrieved when exactly these neurons get activated
  • This retrieval activates another wave of genetranscription and synaptic consolidation that stabilises the memory
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11
Q

Why do particular cells become engram cells?

A

The cells that become engram cells tend to be very excitable at the time
If you manipulate the excitability of the cells you can change the excitability of the engram cells (Joselyn and Tonegawa, 2020)

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12
Q

Do you need gene transcription to retrieve memory? What if its just needed for memory retrival and not encoding?

A

read ryan et al, 2015

animals trained with anisomycin to prevent gene transcription to block memory consolidation

anisomycin treated animals have impared condition memory. However,

read back up on this confusing:
pretty sure it means that even though protein synthesis is blocked, memories are still stored in these animals. Perhaps this means that you need gene transcription to retrieve the memories.

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13
Q

How does memory relate to Sex?

A

memory consolidation is Sex dependent

BDNF was upregulated in memory consolidation in males, but downgraded in memory consolidation in females

This mutation affects memory only in males, but not in females

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14
Q

SYSTEMS CONSOLIDATION:

What is the standard consolidation theory?

A

Standard Consolidation theory:
old memories move away from the hippocampus.
The role of the cortex (ACC) becomes more important.
Lesion studies show this.

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15
Q

What is the synaptic tagging hypothesis?

A

Initially the hippocampus has an important role
It remains important, but the cortex gets involved quickly and becomes as important.

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16
Q

What are differences between the standard consolidation theory, the synaptic tagging hypothesis and the multitrace theory?

A

Delve more into this

17
Q

What is evidence that the hippocampus region is important for remote memory?

A

Wheeler et al, 2011
gave animals fear conditioning
cFOS was analyzed
initially, mostly hippocampus showed cFOS
30 days after conditioning, the neocortex shows more cFOS, but the hippocampus still shows cFOS

Goshen et al, 2013
used optogenetics
animals trained in fear conditioning. optogenetics inactivated the hippocampus with light.
Doing so impaired contextual memory

18
Q

What is memory reconsolidation? what is evidence for this

A

retrieval of long term memory makes memory vulnerable, protein is degredaded. This requires restabalisation with transcription and translation

evidence:
- you can erase a memory after retrieval by blocking protein synthesis with anisomycin
- Nader et al, nature 2000

19
Q

what are boundary conditions for memory reconsolidation?

A

conditions permitting a memory to undergo reconsolidation: e.g ampa receptors, glutamate

Conditions that begin to inihibit reconsolidation from occuring: e.g memory age

Conditions that prevent reconsolidation from occuring: memory aquired in old age

Nader (2015)

20
Q

What happens during memory destabalization?

A

Proteins get degraded at the synapse

proteins get ubiquinitated and then are degredaded by the proteasome
This earmarks the proteins that need to be removed
This happens after memory retrieval
E.g AMPA receptor subunits get degraded

This will affect LTP and the structure of the synapse which will affect the maintenence of a memory.

Protein synthesis is then needed to return the supply and keep the memories.

21
Q

What is evidence that the processes behind consolidation and reconsolidation are different

A

lee at al 2004

IEG’s BDNF and ZiF268 were blocked before fear conditioning, and found a long term memory impairment following BDNF but not ZiF showing BDNF was needed for consolidation

Then they did the same thing just before retrieval and found blocking BDNF had no impact, but Zif blocked retrieval

This shows that they have different underlying processes

22
Q

What is evidence that reconsolidation is a partial recapitulation of consolidation

A

Von hertzen and Giese (2005)
Read up on this

23
Q

What is application of these findings on reconsolidation??

A

Could be used to treat PTSD
Kida, 2018

24
Q

What is memory consolidation and why is it necessary?

A

Memory consolidation is the process that transforms newly acquired, labile information into stable, long-term memories.

Two forms:

Synaptic consolidation (within hours): Strengthens synapses via protein synthesis and gene expression.

Systems consolidation (days–months): Involves reorganisation across brain regions, especially from hippocampus to neocortex.

Necessary to stabilise memory traces, making them less susceptible to disruption (e.g., from electroconvulsive shock or protein synthesis inhibitors).

25
Q: How does arousal influence synaptic memory consolidation?
Emotional or arousing experiences enhance memory consolidation via amygdala–hippocampus interactions. McGaugh et al. (2000) showed that administering norepinephrine or glucocorticoids into the basolateral amygdala after learning enhances memory for that event. Conversely, blocking amygdala activity or stress hormones impairs long-term retention, demonstrating that modulatory input from emotional circuits influences plasticity in memory-related regions like the hippocampus.
26
Why is protein synthesis essential for memory formation?
Classic experiments using anisomycin (a protein synthesis inhibitor) show that when injected into the brain after learning, animals fail to retain the memory. Short-term memory (STM) is spared, but long-term memory (LTM) is impaired. There’s a critical window (~1–4 hours post-training) during which new protein synthesis is necessary to stabilise memory. This supports the idea that memory requires the synthesis of plasticity-related proteins (PRPs) that strengthen synaptic connections.
27
Which molecular and genetic pathways underlie synaptic memory consolidation?
CREB (cAMP response element-binding protein) is a key transcription factor activated by learning. Mice with impaired CREB function show deficient LTM. CREB overexpression leads to enhanced memory and increased engram allocation. Immediate early genes (IEGs) such as zif268, c-Fos, Arc are rapidly upregulated in neurons after learning and act as markers of plasticity. Epigenetic regulation (e.g., histone acetylation) enhances gene transcription during consolidation. HDAC inhibitors (which increase acetylation) enhance LTM in rodents, showing a role for chromatin remodelling in memory.
28
What are engram cells, and how do we know they store memory traces?
Engram cells are specific neurons activated during learning and reactivated during recall. Identified by expression of IEGs (e.g., c-Fos) or using transgenic systems (e.g., TetTag, c-Fos–tTA mice). Liu et al. (2012) used optogenetics to activate engram cells in the dentate gyrus → artificially induced a memory in a neutral context. Ablating or silencing engram cells prevents memory retrieval. Shows that specific neurons encode specific memories, and their reactivation is sufficient for recall.
29
How is it decided which neurons become engram cells, and how can memories be linked?
Neurons with higher excitability during learning are more likely to be allocated to engrams. CREB overexpression in certain neurons biases those neurons toward memory storage. If two experiences occur within a short time window (e.g., 6 hours), they can be encoded by overlapping engram populations. Cai et al. (2016): Mice formed overlapping engrams for two events learned close in time → led to linked recall, where recalling one memory triggered another. This has implications for contextual associations and generalisation.
30
How does sex influence synaptic consolidation and gene regulation? A:
Mizuno et al. (2006) showed that male and female mice use different molecular pathways to support memory. Male mice require BDNF–TrkB signalling in the hippocampus for consolidation, but females use alternative pathways. Disruption of male-specific BDNF impairs memory only in males. Highlights the importance of sex as a biological variable in memory research and suggests different vulnerabilities or resilience to memory-related disorders.
31
What are the two major models of systems consolidation?
Standard Model (Squire): Memory is initially dependent on the hippocampus, but with time it becomes hippocampus-independent as it's transferred to cortex. Supported by retrograde amnesia studies (older memories spared after hippocampal damage). Multiple Trace Theory (MTT): Proposes that episodic memories always depend on the hippocampus. Semantic memories may become hippocampus-independent. Goshen et al. (2011): Optogenetic inactivation of CA1 impairs remote memory recall, supporting MTT.
32
: What is memory reconsolidation, and how was it discovered?
Reconsolidation is the process where a reactivated memory becomes labile and must be restabilised. Nader et al. (2000): Injected anisomycin into the amygdala after reactivating a fear memory → the memory was erased. Shows that retrieval triggers a new window of plasticity, requiring protein synthesis, similar to initial consolidation. Allows for updating, strengthening, or disrupting stored memories.
33
Q: What cellular mechanisms support memory reconsolidation after retrieval?
After a memory is retrieved, it becomes labile and must undergo reconsolidation to be stored again. Reconsolidation requires two key steps: Protein degradation (via the ubiquitin–proteasome system) to destabilise the original memory trace. New protein synthesis to restabilise and update the memory. Lee et al. (2008) showed that blocking proteasome activity after retrieval prevents destabilisation, meaning the memory cannot be modified — even if protein synthesis is blocked. Nader et al. (2000) demonstrated that blocking protein synthesis post-retrieval erases the memory. Key molecules involved: UPS (ubiquitin–proteasome system) Zif268 (critical for reconsolidation) Arc, CREB, and AMPAR subunits (e.g., GluA2) Conclusion: Reconsolidation is a two-phase process: first destabilisation via protein degradation, then restabilisation via synthesis. This allows memories to be updated or erased after retrieval.
34
How do the molecular mechanisms of memory consolidation and reconsolidation differ? A:
Although both require protein synthesis, consolidation and reconsolidation rely on different genes and proteins. Lee et al. (2004) used antisense oligonucleotides in mice to knock down: BDNF: required for consolidation (long-term memory formation), but not reconsolidation. Zif268 (Egr1): required for reconsolidation, but not consolidation. These dissociable requirements suggest that reconsolidation is not just a repetition of consolidation, but a distinct and adaptive mechanism. Implication: Memories can be selectively updated after retrieval without affecting new memory formation.
35
How can memory reconsolidation be used in therapeutic contexts, such as PTSD? A:
Because memories become labile after retrieval, reconsolidation allows modification of maladaptive memories. Key therapeutic strategies: Propranolol after recall: In PTSD patients, propranolol (β-blocker) given post-recall reduces emotional intensity of the traumatic memory. (Brunet et al., 2008) Extinction during reconsolidation window: In rats, fear extinction training given shortly after memory reactivation led to long-lasting fear reduction. (Monfils et al., 2009) Pharmacological disruption: Experimental use of protein synthesis inhibitors post-reactivation erases memory in animals. Reconsolidation-based methods show promise for PTSD, phobias, and addiction by targeting and altering specific memory traces.