week 5 - experience dependent plasticity Flashcards

1
Q

watch this lecture again - went too fast

A
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2
Q

Both LTD and LTP are NMDA dependent,
how can reverse effects share a mechanism?

A

figure this out

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3
Q

Describe cortical maps

A

topographic representation of some features of the outside world onto the cortical space of the brain

e.g mice have whisker maps where each whisker is topographically mapped on the cortex

we have the same with our visual field, in the striate cortex

tootell et al, 1982, showed if you show a pattern on the visiual field, activitation of the cortex will show this pattern

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4
Q

describe ocular dominance stripes
(macaque, blasdel 1992)

A

If you only show an image to someone in one eye (blocked the other eye) stripes of activation form in the cortex. If you get them to close the other eye different stripes of activation forms

the brain keeps the two inputs seperate in the cortex until they reach the layer 2/3 of the cortex ? check this

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5
Q

describe horton and hocking 1996

A

if you do the occular dominance experiment at birth you already see occular dominnance stripes

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6
Q

describe crowley and katz 2000 horrible animal ocular dominance experiment

A

remove the eyeball of the animal at different stages.

read up on this

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7
Q

describe retina inactivation in huberman et al 2003

A

ferret experiment

if you use a toxin from frog to prevent retina activation, before the eyes open, this blurs the boundary of ocular dominance stripes

this shows you need activity for left and right eye stripes to be well formed

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8
Q

how does ocular dominance relate to hebbian plasticity?

A

activity-dependent plasticity prior to eye opening segregates inputs with uncorrelated spontaneaous activity

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9
Q

how do you prove that hebbian plasticity is essential for this (iwasato et al 2000)

A

if you do the same experiment above but remove NMDA receptor the effect is blocked

Shows it is hebbian platicity becasue plasticity is NMDA dependent

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10
Q

what happens to the stripes post monocular deprivation? hubel and wisel 1977

A

post monuclar deprivation, the non-deprived eye takes over and the stripes get bigger for that eye

This is an example of experience dependent plasticity

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11
Q

What do recordings of individual neurons show us about activity dependent plasticity in the eyes

A

pre-deprivation most neurons take input from both eyes

post-monocular deprivation, neurons have a bias to the open eye

if you do this experiment with a NMDA receptor block, you prevent this shift

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12
Q

what do these studies show us?

A

*Relatively crude maps, such as retinotopic maps are
largely not determined by neural activity instead requiring
concentration gradients and molecular addresses
* More detailed maps such as those including ocular
dominance and orientation selectivity require activity
and experience
* Ocular dominance and binocular integration are severely
affected by monocular deprivation or strabismus but
largely unaffected by binocular deprivation
* Ocular dominance plasticity is a competitive process

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13
Q

explain orientation selectivity

A

review and explain

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14
Q

what is the effect of NDMA blocking on orientation selectivity?

A

the development of orientation selectivity is blocked by NMDA antagonist APV (bear et al, 1990)

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15
Q

what are orientation pinwheels?

A

there are some areas on the orientation selectivity map where the is areas of pinwheels where all orientations are next to each other

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16
Q

how might you exeperimentally limit experience of orientation? (tanaka et al 2007)

A

put goggles on the head of a kitten where either horizontal or vertical features are represented

17
Q

how can you measure neural activity using calcium imaging?

A

take gfp (green flourescent protein) and snip it
combine it with calmodulin

everytime calcium binds to calmodulin it closes the gfp and it becomes flouresenct

this is great because calcium is a good proxy for neural activity

18
Q

how can you prove orientation selectivity is experience dependent

A

if you put the goggles on the kittens early in life

then you look at the orientation maps (using calcium flouresence imaging),

kittens with goggles early in life show inhibition of orientation selectivity because of the googles

this is not the case using kittens late in life

this suggests orientation selectivity is experience dependent but there is a critical period for this

19
Q

how does orientation selectivity change due to associative learning? as proof of experience dependent plasticity

A

you can train yourself to spot things in your visual fields

e.g a radiologist can spot a fracture in an x-ray when a normal person can’t

you can study this with fMRI, or using patch clamps or electrode recording in mice or monkeys

20
Q

how does learning lead to improved stimulus representation in orientation selectivity

A

learning leads to improved stimulus representations:
- stimulus amplitude increases
- number of neurons reacting to stimulus increases
- neurons develop less misfiring to non-specific orientations. The ‘sharpness’ of the firing in relation to the specific orientation increases

change in sharpness with learning is outlined by schoups et al 2001

21
Q

what other evidence is there for orientation selectivity learning through sharpening of responses?

A

mice go through virtual reality corridor

looking at how the neurons light up through calcium imaging

reward task - if you see veritical they learn to lick the stripes, if not they learn not to lick

post learning, the orientation selectivity response of the neurons had sharpened

poort et al 2002

22
Q

What is Hebbian plasticity and how is it bidirectional?

A

Hebbian plasticity refers to activity-dependent changes in synaptic strength. It is bidirectional:

LTP (Long-Term Potentiation) strengthens synapses when pre- and post-synaptic neurons fire together (“fire together, wire together”).

LTD (Long-Term Depression) weakens synapses when firing is uncorrelated (“fire out of sync, lose your link”).
Dudek and Bear (1992) demonstrated that both processes depend on NMDA receptor-mediated calcium influx—the amount of calcium determines the direction.

23
Q

Q: How do cortical maps demonstrate experience-dependent plasticity, and what did Zembrzycki et al. (2015) contribute to this understanding?

A

A: Cortical maps—such as those for retinotopy, ocular dominance, and orientation selectivity—reflect the brain’s spatial organisation of sensory input.

Retinotopic maps are relatively hard-wired and shaped by molecular gradients and developmental cues.

More refined maps, such as ocular dominance and orientation selectivity, rely on activity- and experience-dependent processes for their formation and refinement.

Zembrzycki et al. (2015) conducted experiments in genetically modified mice to investigate how thalamic inputs instruct cortical map formation.

They altered thalamocortical input patterns by changing the expression of guidance molecules and transcription factors.

Their results showed that altering thalamic input identity or pattern was sufficient to re-specify functional maps in the cortex, such as changing barrel fields in somatosensory cortex or visual representations.

Conclusion:
Zembrzycki et al. demonstrated that the identity and activity pattern of thalamic inputs, even in early development, help instruct cortical specialisation. This links molecular and activity-based mechanisms of plasticity.

24
Q

What did Huberman et al. (2003, 2006) show using retinal inactivation in ferrets, and what does this reveal about experience-dependent plasticity?

A

Huberman et al. used retinal inactivation to investigate how spontaneous retinal activity influences the development of visual system organisation, particularly ocular dominance (OD) column segregation.

Experimental Design:
They used epibatidine, a potent nicotinic receptor agonist, to inactivate retinal ganglion cell firing before eye opening (Postnatal Day 1–10) in ferrets.

Epibatidine blocks spontaneous retinal activity without causing physical damage.

They compared these animals to controls with normal spontaneous activity.

Findings (2003 - LGN):
In control animals, inputs from each eye segregated into distinct regions of the lateral geniculate nucleus (LGN).

In epibatidine-treated animals, LGN segregation failed to occur, indicating that spontaneous, patterned retinal activity is necessary for the normal development of eye-specific layers in LGN.

Findings (2006 - V1):
Follow-up experiments (Huberman et al., 2006) showed that ocular dominance columns in V1 also failed to develop normally following the same epibatidine inactivation.

This demonstrated that retinal activity is not only crucial for thalamic (LGN) segregation but also for functional cortical map formation.

Conclusion:
These studies provided strong evidence that spontaneous neural activity—independent of visual experience—plays an instructive role in establishing early visual maps. This supports the view that activity-dependent mechanisms guide neural circuit development, even before the onset of sensory experience.

25
What evidence supports that non-activity-dependent factors influence the development of ocular dominance (OD) columns, and what did Crowley and Katz (2000) demonstrate?
: While many studies emphasise the role of neural activity in forming ocular dominance columns, Crowley and Katz (2000) provided compelling evidence that activity-independent mechanisms also contribute to early cortical organisation. Experimental Design: The researchers surgically removed one or both eyes of neonatal ferrets very early in development—before the onset of spontaneous retinal activity or patterned vision. This eliminated any possibility of eye-specific neural activity reaching the brain. They then examined the visual cortex (V1) using anatomical tracing and functional assays during postnatal development. Key Findings: Even in the absence of any retinal input, there were residual patterns of ocular dominance column-like organisation in the visual cortex. Though these patterns were less distinct and more variable than those in normally developing animals, their presence indicated an underlying scaffolding or molecular framework guiding the formation of ocular dominance zones. This contrasts with studies where activity was altered but not removed entirely (e.g., via monocular deprivation), which led to much more dramatic reorganisation. Conclusion: Crowley and Katz demonstrated that molecular cues or intrinsic developmental programs—such as axon guidance molecules and genetic patterning—can initiate the early layout of cortical structures like OD columns. However, full refinement and maintenance of these structures still depend on neural activity. This study emphasizes that both activity-dependent and activity-independent mechanisms are required for proper sensory map development.
26
How does Hebbian plasticity lead to the formation of ocular dominance (OD) columns before eye opening?
: Hebbian plasticity drives the formation of OD columns before visual experience begins by acting on spontaneous, uncorrelated retinal activity from each eye. Mechanism: Before eye opening, retinal ganglion cells spontaneously fire in uncorrelated bursts, with left and right eyes generating distinct activity patterns. These patterns reach the lateral geniculate nucleus (LGN) and then the primary visual cortex (V1), where inputs from both eyes initially overlap. Hebbian plasticity then operates on these signals: Inputs that fire together (i.e., from the same eye) are strengthened. Inputs that fire out of sync (i.e., from the opposite eye) are weakened. Over time, this activity-dependent synaptic modification segregates left and right eye inputs into alternating columns in Layer 4 of V1—forming the ocular dominance map. Summary: This is a classic example of "fire together, wire together"—Hebbian rules applied to spontaneous activity can organise neural circuits even in the absence of sensory input.
27
What is the effect of NMDA receptor blockade on ocular dominance plasticity?
Kleinschmidt, Bear, and Singer (1987) showed that blocking NMDA receptors in V1 prevents ocular dominance shifts during monocular deprivation (MD). Experiment: Animals underwent monocular deprivation during the critical period. In some animals, NMDA receptor activity in V1 was blocked using pharmacological agents. In these animals, no shift in ocular dominance occurred, despite the deprivation. Conclusion: NMDA receptors are critical for LTP/LTD mechanisms that underlie Hebbian plasticity. Without NMDA-mediated calcium influx, synapses from the deprived eye do not weaken, and dominance does not shift. This confirms that ocular dominance plasticity is NMDA-dependent, reinforcing Hebbian mechanisms.
28
Q: What is the role of GABAergic inhibition in opening and closing the critical period for ocular dominance plasticity?
A: GABAergic inhibition regulates the timing of the critical period, the window of heightened plasticity in postnatal development. Key Studies: Kirkwood and Bear (1994) showed that feed-forward inhibition is needed to open and later close the critical period. Hensch and Maffei groups demonstrated that: Low inhibition = immature circuit, too noisy for precise Hebbian plasticity. Moderate inhibition = opens the critical period by stabilising circuits and lowering noise. High inhibition = closes the critical period by suppressing activity below the plasticity threshold. Conclusion: The level of cortical inhibition gates when Hebbian plasticity can occur. This determines when the brain is most sensitive to experience and when that sensitivity ends.
29
How is orientation selectivity developed and what is its dependence on experience?
Orientation selectivity refers to the tendency of V1 neurons to respond preferentially to edges of a specific angle. Key Findings: Hubel and Wiesel (1968) first described orientation-selective cells in V1. Bear et al. (1990) used APV (an NMDA receptor antagonist) to block NMDA receptors in developing animals: Result: Orientation tuning failed to develop, showing that NMDA receptor activity is essential for the experience-driven refinement of these properties. Mechanism: Orientation selectivity is sharpened via Hebbian strengthening of inputs aligned with preferred orientations. Requires visual input during development and NMDA receptor activation. Conclusion: Orientation selectivity develops through experience-dependent synaptic plasticity, requiring both sensory input and NMDA-mediated Hebbian mechanisms.
30
Q: How does associative learning modify orientation tuning in the visual cortex?
Associative learning refines sensory representations by modifying the strength and selectivity of neuronal responses to stimuli. Key Experiments: Schoups et al. (2001): Trained monkeys on orientation discrimination tasks. Found increased tuning sharpness in V1 neurons—steeper tuning curves for trained orientations. Poort et al. (2022): Used two-photon calcium imaging in awake, behaving mice during visual discrimination learning. Found suppression of responses to non-preferred stimuli, enhancing contrast between representations. Khan & Hofer (2018): Showed that inhibitory microcircuits gate plasticity during associative learning, determining when learning-induced changes can occur. Conclusion: Associative learning improves neuronal discrimination by refining orientation tuning—either by enhancing preferred responses or suppressing non-preferred ones. This process is experience-dependent, task-specific, and gated by local inhibition.
31
Describe critical periods
Critical periods occur at different times for different regions of the brain, with primary sensory regions of neocortex passing through a critical period earlier than higher order regions. * The opening of the critical period is determined by an increase in cortical inhibition that reduces noise and allows experience to drive Hebbian plasticity. * The closure of the critical period is determined by a further increase in cortical inhibition which prevents sensory experience from driving enough activity for Hebbian plasticity to occur. * The likelihood of plasticity occurring, and its direction can be governed not only by GABAergic inhibition but also other molecular factors such as NMDA receptor composition. * Aberrant sensation during critical periods of post-natal development can result in lasting sensory conditions, such as amblyopia. * Pharmaceutical agents, such as fluoxetine, have been used to reopen the critical period, while other interventions, including sensory deprivation appear to have a similar effect
32
Q: How is neural activity measured using calcium imaging, and what is GCaMP? A:
Calcium imaging is a method to monitor neuronal activity by detecting calcium ion (Ca²⁺) influx, which occurs during action potentials. GCaMP: A Genetically Encoded Calcium Sensor GCaMP combines: GFP (Green Fluorescent Protein) – derived from Aequorea victoria jellyfish Calmodulin (CaM) – a calcium-binding protein RS20 peptide – binds to calmodulin when calcium is present How It Works: When a neuron fires, Ca²⁺ enters the cell. Ca²⁺ binds to calmodulin, changing its conformation. This brings GFP into a fluorescent state, emitting green light. The fluorescence intensity increases with neural activity, allowing real-time visualisation of spiking. Experimental Setup (Chen et al., 2013; Rupprecht et al., 2021): A patch pipette or viral vector introduces GCaMP into neurons. An objective lens captures the fluorescence signal across an imaging plane. Neural activity is recorded as changes in fluorescence, often aligned with spike events. Conclusion: GCaMP-based calcium imaging is a powerful, non-invasive tool for tracking population-level or single-cell neural dynamics in vivo, especially during behaviour or learning.
33
How does Hebbian plasticity explain the formation of ocular dominance columns in V1?
Hebbian plasticity accounts for ocular dominance column formation in Layer 4 of V1 through spontaneous retinal activity before eye opening. Uncorrelated activity from each eye strengthens intra-eye synapses and weakens inter-eye competition, leading to segregation into alternating eye-specific columns.
34
How does Hebbian plasticity explain the weakening of the deprived eye in monocular deprivation experiments?
Monocular deprivation reduces activity from the deprived eye. Under Hebbian rules ("use it or lose it"), weakened input leads to LTD-like synaptic depression, while the non-deprived eye strengthens via LTP. This causes a shift in ocular dominance towards the open eye.
35
Q: How does Hebbian plasticity contribute to the development of orientation selectivity? A:
Experience-driven activation of neurons by specific edge orientations leads to synaptic strengthening for co-active inputs (Hebb’s rule). Over time, this results in neurons becoming selectively tuned to particular orientations, refining cortical feature maps in V1.
36
: How does associative learning improve stimulus representations in the brain? A:
Associative learning refines neural coding by enhancing responses to relevant stimuli and suppressing irrelevant ones. This results in improved tuning, sharper representations, and better discrimination, especially in sensory cortices like V1 (e.g. Poort et al., 2022; Schoups et al., 2001).
37
How does GABAergic inhibition gate plasticity during development? A:
GABAergic inhibition regulates the onset and closure of critical periods: Moderate inhibition reduces network noise, allowing Hebbian plasticity. Excessive inhibition suppresses activity, closing the window for plasticity. This gates when experience can shape circuits.
38
What is the role of GABAergic inhibition in top-down gating of plasticity during associative learning?
In adulthood, local inhibitory circuits modulate when and where plasticity occurs. This top-down gating, shown in studies like Khan & Hofer (2018), allows plasticity to be task-relevant and context-sensitive, ensuring learning occurs only under appropriate conditions.