Cell Bio 3 Flashcards
The cytoskeleton is composed of
¥ Actin filaments
¥ Microtubules
¥ Intermediate filaments
Actin polymerizes to form
actin filaments (microfilaments): are flexible fibers 7 nm in diameter and several μm in length, organized into structures such as bundles and 3-D networks
- Very abundant, 5-10% of total protein in eukaryotic cells
- Mammals have 6 actin genes, 4 expressed in muscle cells, 2 in non-muscle cells
- All actins are highly conserved and similar
- Yeast actin is 90% identical to mammal actin
- actin monomers are oriented in the same direction, so actin filaments have polarity; important in their assembly and in establishing the direction of myosin movement relative to actin
G actin
actin monomer, has tight binding sites that mediate head-to-tail interactions with two other actin monomers, to form filaments (filamentous [F] actin).
Treadmilling
the barbed end of a filament grows 5–10 times faster than the pointed end.
Actin bound to ATP associates with the barbed ends, and the ATP is then hydrolyzed to ADP.
ADP-actin is less tightly bound than ATP-actin, and dissociates at the pointed end, lose here.
Grows usually at + end and loses usually at -
Actin-binding proteins
- regulate assembly and disassembly of actin filaments, cross-linking into bundles and networks, and associations with other cell structures
Formins
bind ATP-actin and nucleate initial polymerization of long unbranched actin filaments.
Profilin
binds actin monomers and stimulates exchange of bound ADP for ATP, increasing the local concentration of ATP-actin.
Arp2/3 complex
(actin-related proteins): initiate growth of branched actin filaments, important in driving cell movement at the plasma membrane
Tropomyosins
stabilize actin filaments by binding lengthwise along the groove of the filament.
Capping proteins stabilize actin by binding to the barbed or pointed ends.
cofilin
severs filaments, making new ends for polymerization or depolymerization
Actin filaments are organized into:
Actin bundles—filaments are cross-linked into parallel arrays.
Actin networks—filaments are cross-linked in arrays that form 3-D meshworks with the properties of semisolid gels.
Cross-linking proteins have at least two domains that bind actin called:
Actin-bundling proteins are small, rigid proteins that force filaments to align closely.
Actin-network proteins are large, flexible proteins that cross-link perpendicular filaments
Two types of actin bundles:
Parallel bundles—closely spaced filaments aligned in parallel, with the same polarity, with barbed ends adjacent to the plasma membrane.
¥ Fimbrin is a bundling protein first isolated from intestinal microvilli.
Contractile bundles—widely-spaced filaments cross-linked by α-actinin dimers.
Increased spacing between filaments allows myosin to interact with the actin filaments.
filamin
actin network protein, form flexible cross-links
- A filamin dimer is a flexible V-shaped molecule w actin-binding domains at end of each arm
spectrin
is a member of the calponin family of actin-binding proteins
- a tetramer of two polypeptides, α and β. The ends of the tetramers associate with short actin filaments, resulting in the spectrin-actin network.
Ankyrin links the spectrin-actin network to plasma membrane by binding to spectrin and band 3
Protein 4.1 is another link that binds spectrin-actin junctions and glycophorin.
Dystrophin
(a calponin) is a linking protein in muscle cells, which links actin filaments to transmembrane proteins in the plasma membrane, which link to the extracellular matrix, helping maintain cell stability during muscle contraction.
Integrins
transmembrane proteins that attach fibroblasts to matrix
focal adhesions
- sites of attachment, are also attachment sites for large actin bundles called stress fibers
Stress fibers-
large actin bundles attaches to focal adhesions, contractile bundles, cross-linked by α-actinin and stabilized by tropomyosin.
Two other proteins, talin and vinculin are involved in binding stress fibers.
Adherens junctions
in sheets of endothelial cells, cell to cell contacts form a continuous adhesion belt around each cell.
cadherins
transmembrane proteins that mediate contact and bind to cytoplasmic catenins, anchoring actin filaments to the plasma membrane.
Microvilli
fingerlike extensions; abundant on cells involved in absorption.
Microvilli of epithelial cells lining the intestine
- form a layer on the apical surface (brush border) of about 1000 microvilli per cell
- increase the surface area for absorption by 10-20x
- contain parallel bundles of 20 to 30 actin filaments cross-linked by fimbrin and villin.
- actin bundles are attached to the plasma membrane by the calcum-binding protein calmodulin in association with myosin I.
3 types of microvilli
Pseudopodia are extensions of moderate width, responsible for phagocytosis and the movement of amoebas
Lamellipodia are broad, sheet-like extensions at the leading edge of fibroblasts
Filopodia are thin projections of the plasma membrane supported by actin bundles
Movement of a cell across a surface proceeds in three stages:
- Extension of the leading edge
- Attachment of leading edge to the substratum
- Retraction of the rear of the cell into the cell body
Extension of the leading edge involves branching and polymerization of actin filaments.
Inhibition of actin polymerization blocks formation of cell surface protrusions.
Cells move in response to signals from other cells or the environment.
myosin
molecular motor—a protein that converts chemical energy (ATP) to mechanical energy, generating force and movement. THICK FILAMENT
Myosin heads hydrolyze ATP, providing energy to drive filament sliding.
Myosin changes shape during repeated cycles of interaction between myosin heads and actin.
Conformational changes in myosin result in movement of myosin heads along actin filaments.
Muscle fibers-
large cells formed by fusion of many cells in development, in skeletal muscles
- cytoplasm consists of myofibrils- bundles of thick myosin filaments and thin actin filaments
o a myofibril is a chain of contractile units called sarcomeres
o sarcomeres give skeletal and cardiac muscle their striated appearance
o sarcomeres go from one Z-disk to another
o The bands correspond to presence or absence of myosin filaments.
o Actin filaments are attached at the barbed ends to the Z disc, which includes the cross-linking protein α-actinin.
myosin II
(the type in muscle)- has two heavy chains and two pairs of light chains
- heavy chains have a globular head region and a long α-helical tail
- tails twist around each other in a coiled-coil.
Sarcoplasmic Reticulum
releases Ca2+ in response to nerve impulse, triggers contraction
- increased Ca2+ concentration in the cytosol affects two actin filament binding proteins: tropomyosin and troponin
o Tropomyosin binds lengthwise along actin filaments, and is also bound to troponins.
o When Ca2+ is absent, the tropomyosin-troponin complex blocks binding of myosin to actin, so NO CONTRACTION
o Binding of Ca2+ to troponin C shifts the complex, allowing myosin to bind to actin
Myosin light-chain kinase
catalyzes contraction that is regulated primarily by phosphorylation of a myosin light chain
MLCK is regulated by the Ca2+-binding protein calmodulin
Cytokinesis
division of a cell following mitosis.
A contractile ring of actin and myosin II is assembled by membrane-bound myosin just beneath the plasma membrane. Contraction of the ring pinches the cell in two.
Myosin I:
Globular head groups act as molecular motors.
Have different structure than Myosin II in muscle
- short tails bind to other structures.
- Movement of myosin I along an actin filament can transport its attached cargo, eg vesicle
- Transport of vesicles and organelles along actin filaments and the movement of plasma membrane during phagocytosis and pseudopod extension
Myosin V:
Two-headed dimer that transports vesicles and other cargo along actin filaments; important in neurons.
¥ provides new membrane components to for extension of cell processes
Microtubules
are rigid hollow rods that function in cell movements and determining cell shape
- Made of tubulin, dimers of α-tubulin and β-tubulin
- Dynamic structures that undergo continual assembly and disassembly
- Have polarity (plus and minus ends), which determines direction of movement
- Tubulin dimers polymerize to form microtubules: 13 protofilaments around a hollow core
o Protofilaments are head-to-tail arrays of tubulin dimers arranged in parallel.
- γ-tubulin in the centrosome helps in initiating microtubule assembly
Dynamic instability
alternating between cycles of growth and shrinkage; microtubules are stabilized at the minus end and rapid GTP hydrolysis results in this instability
• As long as new GTP-bound tubulin dimers are added more rapidly than GTP is hydrolyzed, a GTP cap remains at the plus end and microtubule growth continues.
Shrinkage of microtubules
GTP is hydrolyzed more rapidly than new subunits are added so GDP-bound tubulin at the plus end of the microtubule leads to disassembly
Microtubule-associated proteins (MAPs)-
regulate the dynamic behavior of MT, the growth or shrinkage of the + ends, - ends are stabilized by proteins that prevent depolymerization.
Polymerase MAPs accelerate growth by increasing incorporation of GTP-bound tubulin.
Depolymerase MAPs dissociate GTP-tubulin from the plus end, lead to microtubule shrinkage