Metabolism
Refers to the chemical activities that occur within cells
Structural levels of organisation
organism, systems, organs, tissues, cells, organelles & molecules
Living things are composed of two major kinds of molecules:
Carbohydrates
Elements present: C, H, O
Monosaccharides (1 simple sugar unit): Glucose, Fructose, Galactose
Disaccharides (2 sugar units): Maltose, Lactose, Sucrose
Polysaccharides (many sugar units): Starches, Fibres, Glycogen
Functions in the body: mono- broken down to provide energy, di- energy, poly- energy storage and cellulose structure
Lipids
The major groups include: Fats, oils, phospholipids and steroids.
Phospholipid:
elements present- C,H,O,P
components: 1x three-carbon glycerol backbone, 2x fatty acid molecules, 1x phosphate
function: make up the cell membrane
Triglyceride:
elements present- C,H,O
components: 1x glycerol, 3x fatty acids
specific examples: saturated, unsaturated, polyunsaturated
function: insulation, protect organs, energy source
Proteins
They are made of amino acid units joined together to form polypeptide chains that are then twisted and combined to form protein molecules.
elements present: C,H,O,N,S
components: 20 amino acids
specific examples: Insulin, Amylase, Haemoglobin
function: catalysts, transport, support, receptors
Nucleic Acids
elements present: C,H,O,N,P
RNA:
component- nucleotide (1 phosphate, 1 ribose sugar, 1 base (A,U,G,C))
examples: RNA, tRNA, mRNA, rRNA
function: directs protein synthesis, Hereditary materials (genes)
DNA:
component- nucleotide (1 phosphate, 1 deoxyribose sugar, 1 base (A,T,C,G))
examples: DNA
function: genetic code; codes for proteins
Enzymes
A special group of proteins that act as biological catalysts that speed up chemical reactions by providing an alternate reaction pathway that has a lower activation energy for a reaction to proceed
Two major types of enzyme catalysed reactions
Catabolic Reactions- where enzymes speed up the break down of large molecules into two or more smaller molecules. eg. Digestion, Respiration
Anabolic Reactions- where enzymes speed up the making of large molecules from two or more smaller molecules. eg. Protein Synthesis, Photosynthesis
Two enzyme actions models
Lock and Key Model - where the shape of the active site of enzyme (key) exactly fits the substrate (lock). NOTE: After the enzyme- substrate complex is formed (the key is turned), the reaction proceeds to produce new products and the enzyme is left over and available for repeat.
Induced Fit Model - where the shape of the active site of the enzyme changes slightly (active site moulds around substrate). NOTE: more widely accepted.
Factors affecting enzyme action
Note: pH, temperature, cofactors and inhibitors (all influence shape of the active site) and different enzymes have different optimum pH and temperature values.
Denaturing by enzymes
Denatured enzyme- active site shape no longer fits with substrate
due to many factors e.g. temperature
Cell membrane
The major groups of molecules found in / attached to membranes are:
Phospholipids- These molecules make up the ‘matrix’ of the membrane and are arranged to form two layers (in a bilayer). They separate the internal from the external cellular environments.
Proteins- embedded in the phospholipid bilayer and attached to the membrane outer-surface. Proteins function as: receptor sites (for hormones), transport facilitators, enzymes, antigens, binding sites).
Cholesterol- wedged between phospholipid molecules in eukaryotic cells. Function to increase flexibility at cooler temperatures
Carbohydrates- maybe attached to proteins or phospholipids- aid in cell recognition
Two types of transport across membranes
Passive (no energy required): diffusion, facilitated diffusion. From higher concentration to lower concentration. Moving down a concentration gradient.
OR
active (energy (ATP) required). From lower concentration to higher concentration. Against the concentration gradient
Diffusion
Osmosis
a process where water molecules move from areas where there is high osmotic pressure (lots of water) to areas where there is lower osmotic pressure (less water)….. (It is essentially the diffusion of water molecules).
Three main directions of osmosis across cell membranes.
If the extracellular solution is:
Hypotonic (dilute): water will enter the cell
Hypertonic (concentrated): water leaves the cell
Isotonic: no net movement of water
Osmosis in animal cells
In animal cells (no cell walls) eg. red blood cells:
If extracellular solution is hypotonic: Water will enter cell —> Cell will swell up —> Cell will burst (die).
If extracellular solution is hypertonic: Water will leave the cell —> Cell will shrivel up —> Cell dies.
If extracellular solution is isotonic: There is no net movement into or out of cell.
Osmosis in plant cells
In plant cells (cell walls)
If extracellular solution is hypotonic (in a well watered plant): Water will enter cell and fill vacuole (cell becomes turgid)
If extracellular solution is hypertonic: Water will leave the cell, vacuole shrinks (plasmolysis occurs)
Active Transport
Is the movement of substances from areas of low concentration to high concentration.
Bulk Transport
Is the movement of ‘bulk’ (relatively large volumes) of substances into or out of cells. This occurs via the use of membrane bound vesicles.
There are two major processes involved:
Endocytosis: when substances enter cells via the cell membrane infolding this process is called endocytosis. If during endocytosis the substances that enter are:
Exocytosis: when substances leave cells via a vesicle joining to the membrane
Cell Surface Area to Volume ratios
As cells enlarge, the surface area to volume ratio decreases. Thus, as cells enlarge the rate of transport across the cell surface of required substances and wastes decreases. To increase surface area, some cells ( and even organelles) fold their surface / membranes.
The higher the surface area to volume ratio, the higher the exchange rate (eg. rate of diffusion across a cell surface).
Role of the digestive system
To digest or breakdown food into smaller molecules that can be absorbed from the gut into the circulatory systems for transport to cells for use in metabolic processes (eg. cell respiration)