chapter 5 Flashcards

(51 cards)

1
Q

SNPs (single nucleotide polymorphism)

A

single base change anywhere in genome

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2
Q

mapping with molecular markers

A
  • mapping by DNA sequencing
  • SNPs (single base change) and RFLP (SNP that alters enzyme recognized sequence)
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3
Q

RFLPs (restriction fragment length polymorphism)

A

SNP that alters sequence recognized by enzyme

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4
Q

Snip SNPs

A

restriction site polymorphism

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5
Q

microsatilite markers

A

repeats of sequences

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6
Q

FISH (floresenct insitu hybridization)

A

reveals sites and position of single genes on condensed chromosome

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7
Q

genetic maps show us

A
  • determines if trait/disease is caused by varience of single gene
  • liklihood of trait inheritence
  • recombo
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8
Q

does dominance alter how genes are inheritted

A

No

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9
Q

dominance is interaction of…

A

products of genes

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10
Q

phenotype depends on

A

allele combination

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11
Q

amorph/null allele

A

complete loss of gene function

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12
Q

hypomorph

A

partial loss of gene function (reduction in expression or activitiy)

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13
Q

haplosuffient vs haploinsufficient

A

haplo - recessive
haploin - dominant

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14
Q

loss of function mutations are usually…

A

recessive

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15
Q

gain of function mutations are usually…

A

dominant

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16
Q

hypermorph

A

increase in normal gene function, dominant

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17
Q

antimorph/dominant negative

A

dominant and oppose normal gene function

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18
Q

neomorph

A

dominant gain of gene function

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19
Q

dominant negative

A

interferes with function of wild type gene function

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20
Q

phenocopy

A

loss of gene function

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21
Q

complete dominance

A

phenotype of homo and hetero are the same

22
Q

incomplete dominace

A

heterozygous is it’s own phenotype (1:2:1 ratio)

23
Q

codominance

A

each allele has distinct gene product, both alleles detected in heterozygote

24
Q

codominance example

25
lethal alleles
cause premature death
26
recessive lethel
if both parents are carriers, 1/4 chance of death and 2:1 ratio
27
conditional mutants
lethals isolated and can be manipulation
28
permissable
viable
29
restrictive
dead
30
sublethal
incompletely expressed
31
reasons for an unclear genotype...
-varying degrees of dominance - multiple alleles at each locus - lethal allele
32
penetrance
all individuals have same mutant genotype but not all are phenotypically mutant
33
expressivity
degree that genotype is expressed
34
complimentation test
mate 2 mutants, if the progeny are homo recessive they are on the same gene
35
double mutants
combine mutants in pairs and see if genes interact
36
infer gene interaction based on...
mendalian ratios (2 indepenent is 9:3:3:1)
37
epistasis
effect one gene pair (masks or modifies) on another gene pair
38
linear pathway
genes are linearly converted to product
39
parallel pathway
genes are converted to other genes that combine to end product
40
prototroph
can grow on minimal mediaa
41
auxotroph
needs nutritional substance and minimal media for growth
42
recessive mutations in same path have a ... ratio
9:7 ratio
43
Recessive epistasis ratio
9:3:4
44
epistasis in biosynthetic path
mutation in upstream gene is epistatic to downstream gene
45
epistasis in regulatory development path
mutation in downstream is epistatic to upstream gene
46
dominant episasis ratio
12:3:1
47
modifiers
mutations that supress or enhance phenotype of other mutants
48
supressor mutant
second site mutation that reverses affect of another mutant
49
enhancer mutant
second side mutant that increases affect of another mutation
50
recessive supressors segregate in a __ ratio
13:3
51