Introduction to Biochemistry Flashcards

1
Q

what bond type is the strongest and how is it formed?

A

covalent

the sharing of electrons

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

what is an ionic bond?

A

the attraction of opposite charges

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what is a hydrogen bond?

A

the sharing of a hydrogen atom

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what is a hydrophobic interaction?

A

an interaction of nonpolar substances in the presence of polar substances

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

what is the weakest type of bond?

A

Van der Waals interactions

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

how many covalent bonds can carbon make, and what shape does this result in?

A

four

tetrahedral

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what atoms can carbon bond with?

A

carbon
hydrogen
nitrogen
oxygen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

what is electronegativity?

A

the attractive force that an atomic nucleus exerts on electrons within a bond w

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

what is phosphorylation and what is it used for?

A

the addition of a phosphate

cell signalling reactions

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what is acylation and what is it used for?

A

addition of an acyl group

joining molecules together

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what is carboxylation?

A

addition of a carboxyl group

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what is condensation?

A

when molecules are combined and water is removed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what is hydrolysis?

A

adding water to break up a molecule

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is the first law of thermodynamics?

A

energy can neither be created or destroyed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what is the second law of thermodynamics?

A

when energy is converted from one form to another, some becomes unavailable to do work

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

what is entropy?

A

the amount of disorder in a system

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

what equation is used to calculate the change in gibbs free energy?

A

ΔG = ΔH – TΔS

18
Q

what is an exergonic reaction?

A

a reaction where the free energy of products is less than the free energy of reactants

19
Q

what is the free energy change in an exergonic reaction?

20
Q

what type of reaction can occur spontaneously?

21
Q

what is an endergonic reaction?

A

a reaction where the free energy of the products is more than the reactants

22
Q

what is the free energy change in an endergonic reaction?

23
Q

what do endergonic reactions need to occur?

A

energy input

24
Q

what are the standard conditions?

A
temperature = 298K 
pressure = 1 atmosphere 
pH = 7
25
what type of reaction is ATP breakdown?
exergonic
26
what is metabolism?
all of the reactions occurring in the body
27
what two things are included in metabolism?
catabolism | anabolism
28
what is catabolism?
breaking down complex molecules into smaller ones, releasing energy
29
what is anabolism?
synthesizing complex molecules out of small ones, consuming energy
30
what are stereoisomers?
molecules that are non superimposable mirror images of each other
31
what are the four types of amino acids?
non polar/hydrophobic polar acidic basic
32
what enzyme catalyses the formation of peptide bonds?
peptidyl transferase
33
what is an acid?
a substance that can donate a proton
34
what is a base?
a substance that can accept a proton
35
what determines the strength of an acid and what is this measured by?
how readily it donates a proton the acid dissociation constant
36
what is the primary structure of a protein?
the sequence of amino acids
37
what is the secondary structure of a protein?
the localised shape of the polypeptide backbone
38
what are the three types of secondary protein structure?
alpha helix beta strands and sheets triple helix
39
what is tertiary protein structure?
the 3D structure of an entire polypeptide, including side chains
40
what is quaternary protein structure?
the spatial arrangement of a polypeptide chain with multiple subunits