Lead Identification and Optimization Flashcards

(40 cards)

1
Q

Who is known as “The Father of Microbiology”?

A

Anton van Leeuwenhoek

He was the first person to identify bacteria via microscopy.

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2
Q

What did Louis Pasteur do?

A

He developed the link between bacteria and disease.

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3
Q

What did Koch do?

A

He identified the micro-organisms for anthrax, TB, cholera, and typhoid.

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4
Q

What did Lister do?

A

He helped create the “germ theory of disease”. He used carbolic soap to prevent infections during his surgeries. He was a pioneer of antiseptic surgery.

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5
Q

What did Ehrlich do?

A

He coined chemotherapy.

He used synthetic chemicals to try and cure disease.

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6
Q

Who had the proponent of the “Magic Bullet”?

A

Paul Ehrlich. He aimed to use chemicals to treat disease.

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7
Q

What was the first fully synthetic drug?

A

Salvarsan. It contained 605 arsenic containing compounds. It wasn’t good against bacteria, but was good against sleeping sickness and syphilis.

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8
Q

What are 5 drug targets for small molecules?

A
Enzyme
Receptor
Nucleic Acid
Ion Channels
Transporters
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9
Q

How can a drug be validated?

A

It must be shown to play a critical role in the disease process.

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10
Q

What are 3 strategies for target validation?

A

Gene Knockout
RNA interference
Small molecules

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11
Q

In order to make a new drug for a disease target what must you prove compared to the existing therapy?

A

You must prove the new agent has a statistically proven clear advantage, not just clinically effective.

A new dosage form, less frequent dosing, new target, increased selectivity, etc…

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12
Q

What is a lead compound?

A

A compound with desired biological activity. This can be characterized and modified to produce another molecule with a better profile of wanted properties and less unwanted side effects.

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13
Q

What does the start of a drug discovery project rely on?

A

The “make and test” cycle.

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14
Q

How does Ibrance and Letrozole work to help in breast cancer?

A

Ibrance inhibits CDK 4 and CDK6 from telling the cell to proliferate

Letrozole decreases the production of estrogen, which prevents it from activating CDK 4 and 6.

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15
Q

What are some sources of lead compounds?

A
Chance Observations
Natural products from folk remedies
Random screening
Substrate Analogues
Structure-based design
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16
Q

What is the largest group of recreationally used drugs in the world?

A

Flunitrazepam

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17
Q

In 2008, the FDA approved Thalidomide for the treatment of what in combination with dexamethasone?

A

Multiple myeloma.

18
Q

What is the primary target of thalidomide?

A

CRBN (Cereblon)

19
Q

The optimization of what lead to the development of diuretics, such as chlorothiazide?

A

Sulphanilamide

20
Q

General natural product screening is widely used as a method of finding what?

A

Lead compounds

21
Q

About __% of drugs in clinical use originate from natural products or their derivaties.

22
Q

What is used to treat River Blindness and Lymphatic Filariasis?

A

Ivermectin (anti-parasite), which originated from Avermectin.

23
Q

What is the agent that Tu developed into an anti-malarial drug?

24
Q

What are 3 advantages of natural product screening?

A

Molecules are structurally diverse

Much precedence as a source of lead compounds: Pharmacologically pre-validated.

25
What are 3 problems with natural product screening?
The mixture of products can hide biological activity. Isolation of an active component can be hard to do Structures are complex and difficult to synthesize and identify pharmacophore
26
Are Lovastatin, Pravastatin, and Simvastatin from natural products or synthetic?
Natural products from bacteria and fungus.
27
What does FK506 target?
FKBP and Calcinurin FDA approved for organ transplant. Discovered using a systemiatic screening for immunosuppressive activity
28
This drug blocks a protein called FXR receptor that plays a role in cholesterol metabolism.
Guggulsterone
29
How does Psoralen work and what is it used for?
Psoralen is activated by UV light once ingested. This attaches to dividing cancer cells and kills them. It is used in photodynamic therapy.
30
Can natural substrates or transition-state analogues serve as a lead?
Yes.
31
How does structure-based drug design work?
It uses 3-D X-ray crystallography.
32
What is Veltassa?
It is a potassium binder that is used to treat hyperkalemia.
33
How does Veltassa work?
It increases K+ excretion through binding of K+ int he GI tract.
34
What are 4 ways to optimize lead compounds?
Development of homologous series Isoteric replacement Lipinski's Rule of Five Chemical modification using data from drug metabolism
35
What is a homologous series?
Changing the size of an alkyl group or of a polymethylene chain.
36
What are Isoteres?
Molecules or ions of similar size containing the same number of atoms or valence electrons. Group of atoms showing similar physical or chemical properties to a molecule, due to similarities in their size, electronegativity, or stereochemistry.
37
[True/False] Based on the homologous series theory, the duration of local anesthetic activity is decreased as R is changed from a methyl to a butyl group.
False. As you change from a methyl to butyl group you increase the local anesthetic activity.
38
What are Lipinski's Rule of Five?
There are more than 5 H-bond donors The MW is over 500 The logP > 5. There are more than 10 H-bond acceptors.
39
What does Tamoxifen and 4-hydroxytamoxifen do?
They are selective estrogen receptor modulators (SERMs)
40
Where does Valium come from?
It comes from chlordiazepoxide, which was found to be hypnotica and an anticonvulsant.