Paper 3 Biology (ALL THE CONTENT) Flashcards

(470 cards)

1
Q

What is a monomer?

A
  • The smaller units from which larger molcules are made
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2
Q

What is a polymer?

A
  • Molecules made from a large number of monomers joined together
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3
Q

3 EGs of monomers and polymers

A

Monomers:
- Monosaccharides
- Amino acids
- Nucelotides

Polymers:
- Polysaccharides
- Proteins
- Polynucleotides

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4
Q

What is a condensation reaction?

A
  • The joining of two molecules together with the formation of a new chemical bond whilst eliminating a molecule of water.
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5
Q

What is a hydrolysis reaction?

A
  • breakage of a chemical bond between two molecules and involves the addition of a molecule of water.
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6
Q

What 3 monosaccharides do you need to know?

A
  • Glucose
  • Fructose
  • Galactose
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7
Q

What are isomers?

A
  • The same molecular formula but a different structure/arrangement
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8
Q

What are disaccharides?

A
  • Formed by the condensation reaction of 2 monosaccharides via a glycosidic bond
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9
Q

What are the isomers of glucose?

A
  • Alpha and beta glucose (HOH and OHH)
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10
Q

What are polysaccharides?

A
  • Formed by the condensation of many glucose monomers
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11
Q

What is the structure of amylose?

A
  • unbranched helical polymer of alpha glucose
  • gets its helical structure from the bond angles of glycosidic bonds.
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12
Q

What is the structure of amylopectin?

A
  • A long, branched polymer of alpha glucose, similar to glycogen
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13
Q

How does starch’s structure relate to its function?

A
  • Starch is compact due to its helical structure of amylose so lots of glucose can be stored in a small space.
  • Many branches in amylopectine which increases the points
    where enzymes can act.
  • Insoluble
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14
Q

What is the structure of glycogen?

A
  • Similar to amylopectin
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15
Q

What is the structure of cellulose?

A
  • Long, unbranches chains of beta glucose (straight chain)
  • These chains run in parallel to each other and are linked by hyrdogen bonds to form microfibrils
  • Many microfibrils are arranged in parallel groups called fibres/
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16
Q

Reducing sugars test?

A
  • Benedicts solution, heat, coloured brick red precipitate forms
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17
Q

Non-reducing test?

A
  • Benedicts test doesn;t form brick red precipitate
  • Use HCl acid and heat in a water bath that has been brought to a boil and then sodium hydrogencarbonate to neutralise.
  • Repeat benedict’s test again to form a brick red colour.
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18
Q

Test for starch?

A
  • Iodine dissolved in Potassium iodide solution
  • Solution changes from orange to blue black.
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19
Q

What is the main role of triglycerides in plants and animals?

A
  • Act mainly as energy stores in plants and animals
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20
Q

How are triglycerides formed?

A
  • Condensation reaction of one molecule of glycerol and three fatty acid molecules via an ester bond
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21
Q

Saturated vs unsaturated fatty acids

A

Saturated: Fatty acid contains no C-C double carbon bonds
Unsaturated: Fatty acid contains C-C double bonds

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22
Q

What is the structure of phospholipids?

A
  • Same structure as triglycerides, except that one fatty acid has been replaced by a phosphate group
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23
Q

How are triglycerides, phospholipids related to function

A

Triglycerides:
- Energy storage
- Insoluble so cells dont burst or shrink
Phospholipids:
- Make up the bilayer of cell membrane, controlling what enters or leaves a cell/organelle
- Hydrophobic barrier at the centre of the bilayer
- Glycolopids are formed for cell regonition by combination of lipids and carbs.

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24
Q

Emulsion test

A
  • Shake some of the sample with ethanol
  • Filter the liquid into a test tube of water, leaving any solids behind
  • Positive result would be lipid with a white emulsion
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25
What are amino acid structures?
- Same R group - Different carboxyl group - Different amine group
26
What are the bonds formed between amino acids?
- Peptide bonds
27
primary structure of protein
Sequence of amino acids
28
Secondary structure of amino acids
- Hydrogen bonds form between the amino acids in the chain such as alpha helix and beta pleated sheet
29
Teritary structure
- Further folding of alpha helix and beta pleated sheet including hydrogen bonds, ionic bonds and disulphide bridges.
30
What is the quaternary structure?
- A number of polypeptide chains joined together ( 2 or more)
31
Biuret Solution test
Blue to purple
32
What are enzymes?
- Proteins that act as biological catalysts by lowering the activation energy, minimum amoutn of energy for reaction to happen.
33
What is the induced fit model?
- When the lock and key happens, the enzyme and substrate alter their shape slightly - Weakens specific bonds in the substrate needing to be broken, which lowers the activation energy required for the reaction to happen, increasing rate of reaction.
34
3 factors that affect enzyme activity
(temperature, ph, substrate concentration)
35
What are competitive inhibitors?
- Molecules with similar shape to the substrate that fit into the enzyme's active site to form an enzyme-inhibitor complex, preventing the substrate from binding.
36
What are non-competitive inhibitors?
- Work by binding to enzyme in a place other than the active site. - Changes tertiary structure of the adctive site meaning no complementary binding. - Can't be reversed - No competition happens
37
Function of DNA and RNA?
- DNA holds genetic information in all living cells - RNA transfers genetic information from DNA to ribosomes.
38
DNA structure
- Phosphate - Pentose (Deoxyribose) - Base
39
RNA structure
- Phosphate - Ribose - Either A,U,C,G
40
How do nucleotides join together?
- Nucleotides join by a condensation reaction between the phopshate group of one nucleotide and pentose sugar of another - Forms a phosphodiester bond between two nucelotides
41
What direction are DNA strands?
- antiparallel
42
History of DNA?
- Some argued that DNA was too simple to carry the genetic code. - Some argued that genetic information must be carried by proteins, which are more chemically varied. - 1953 experiments showed that DNA was the true carrier of genetic code after Watson and Circk determined the sturtcure of DNA.
43
DNA structure relation to function?
- Two DNA polynucleotide strands are only joined together by weak H bonds, meaning that strands can separate during DNA replication - Base pairs are protected by sugar-phosphate backbone - Large molecule so carries losts of genetic information
44
RNA structure relation to function
- Much shorter than DNA - mRNA - Genetic info from DNA to ribosomes - tRNA: involved in protein synthesis - rRNA: makes up part of the ribosome structure
45
Why does DNA replicate itself before mitosis and meiosis?
- To ensure all the daughter cells produced have the genetic information to produce all the enzymes and other proteins they need.
46
What does semi conservative replication mean
- Each of the two new DNA molecules has 1 strand from the original molecule and 1 strand of new material.
47
What is the process of DNA replication?
1) DNA helicase breaks hydrogen bonds between bases on the two strands of DNA. The DNA double helix begins to unwind. 2) Original strands act as template for a new strand. Free DNA nucleotides are attracted to complementary bases. 3) DNA polymerase catalyses condensation reaction which join the nucleotides of the new strands together by phosphodiester bonds.
48
How did Watson and Crick prove the semi-conservative theory?
- Through the Meselson and Stahl Experiment. - This was where bacteria were grown on a medium containing heavy 15N nitrogen and the bacteria incorporated nitrogen from the medium into their DNA and is ultracentrifuged to obtain a heavy band of DNA. - Bacteria is transferred to a medium containing lighter 14N nitrogen and are allowed to replicate once and are ultracentrifuged, obtaining an intermediate density band of DNA - Bacteria replicates once more in the lighter 14N medium and the DNA is ultracentrifuged, obtaining both light and intermediate density DNA.
49
2 other models of DNA?
- Conservative (New material would consist of only old DNA) - Dispersive (Original DNA would be cut up into sections leaving you with new DNA molecules with new and original material) (Can't just have intermediate density DNA)
50
ATP
Adenosine triphosphate
51
Why is there lots of energy in phosphate bonds?
- Low activation energy so little energy needed to be put in to break these bonds and are easily broken/ - Lots of energy released when these bonds are broken.
52
What enzyme catalyses ATP synthesis?
- ATP synthase
53
What happens when ATP is formed in the body?
- ATP diffuses to the part of the cell that requires energy and is hydrolysed into ADP and Pi
54
What enzyme catalyses ATP hydrolysis?
- ATP hydrolase
55
Outline ATP as an energy source
- ATP is an immediate source of energy - ATP releases energy is smaller, more manageable quantities
56
Why is water a good metabolite?
- Because many metabolic reactions are either condensation or hydrolysis reactions involving water
57
Why is water a good solvent?
- Water is a polar molecule so can therefore interact with charged ions or polar molecules.
58
Why does water have a relatively high specific heat capacity?
- Due to hydrogen bonding, it takes a lot of energy to change the temperature of water
59
Why does water have a large latent heat of vaporisation?
- It takes a lot of energy to break hydrogen bonds and change liquid water into a gas
60
What is cohesion?
Water forming hydrogen bonds with itself
61
What is adhesion?
Water forms hydrogen bonds with other materials
62
What are inorganic ions?
- Ions that don't contain carbon
63
What is the role of hydrogen ions?
- Concentration of H ions determines pH - Higher = lower pH - pH affects enzymes
64
What is the role of iron ions?
- Haemoglobin contains Fe2+ at its centre which binds to oxygen to temporarily become Fe3+
65
What is the role of sodium ions?
- Co transporter across cell membranes (sodium-glucose) - Active transport (sodium potassium pump) - Nerve impulse transmission
66
What is the role of phosphate ions?
- Bonds between phosphate groups store energy in ATP - Phosphate allows DNA and RNA nucleotides to join to form polynucleotides
67
What are the body's two mechanisms of defense?
- Non specific (Immediate responses and the same for all pathogens E.G. physical barriers and phagocytosis) - Specific (slower responses, specific to each pathogen involving lympocytes)
68
How does the immune system distinguish between self and foreign?
- Each type of cell has specific molecules on its surface that identify it. - However it is by the proteins on the surface which the immune system can recongnise if the cell is self or foreign.
69
What is an antigen?
- A molecule/protein that triggers an immune response by lymphocytes
70
What is a phagocyte?
- A type of white blood cell which carries out phagocytosis
71
What is phagocytosis?
- The mechanism by which cells engluf particles to form vesicles that eventually destroy pathogens.
72
Outline the process of phagocytosis..
1) Phagocyte is attracted to the pathogen 2) phagocyte attaches to chemicals on the surface of the pathogen by specific receptors 3) Phagocyte englufs pathogen and forms a phagosome 4) lysosome fuses with phagosome forming phagolysosome 5) Hydrolysis of the pathogen 6) Phagocyte presents its antigens on its cell surface membrane (APC)
73
What are T lymphocytes?
- Bone marrow - Mature in the Thymus gland - Associated with the cellular response (cell-mediated)
74
What are B lymphocytes
- Made in bone marrow like T - Mature in the bone marrow - Associated with the humoural response
75
What is the cellular immune response?
- Immunity involving body cells that have antigens presented on their surface
76
What is the humoural response?
- Involves antibodies that are present in body fluids
77
Outline the cell mediated response...
- Pathogen invades body cell or are taken in by phagocytosis - Invaded cell presents antigen on its surface membrane - T helper cell binds to the antigen via a specific T-cell receptor - This activates the T helper cell to rapidly divide by mitosis and form clones of this specific T helper cell (clonal selection)
78
What is the role of cloned T helper cells?
- Can develop into memory cells that enable rapid response to future infections by the same pathogen - Stimulate phagocytes to engulf pathogens by phagocytosis - Stimulation of B cells to divide and secrete antibodies - Activation of cytotoxic T cells.
79
What are cytotoxic T cells?
- Cells that kill abnormal cells and body cells that are infected by pathogens - Produce perforin, a type of protein, which makes holes in the cell membrane causing the cell to die as any substances enter it.
80
What is an antibody?
- proteins produced by b lymphocytes in response to an antigen.
81
How to antibodies bind to antigens?
- On the surface of pathogens to form an antibody-antigen complex.
82
Outline the B cell response...
- B cell takes in antigens of a pathogen by endocytosis - B cell processes antigens and presents them on its surface - T helper cells attach to the processed antigens on the B cells and activate it. - B cell divides by mitosis to provide a clone to form plasma cells - Plasma cells produce and secrete the antibodies specific to the antigen on the pathogen's surface. - Antibodies attach to antigens on the surface of pathogens causing them to agglutinate, making it easier for phagocytes to locate and engulf them - B cells develop into memory cells which can divide rapidly into plasma cells.
83
What is the role of plasma cells?
- Secrete antibodies, usually in blood plasma and are involved in the primary immune response
84
What is the role of memory cells?
- Involved in the secondary immune response
85
Difference between primary response and secondary response?
- Secondary response is quicker than primary response - Memory B cells are able to divide rapidly into plasma cells.
86
What is vaccination?
- The introduction of dead/inactive pathogen to stimulate an immune response. - Vaccine stimulate the production of memory cells to an antigen without producing harsh symptoms. - So if the body is exposed to the same antigen, antiboides are produced rapidly.
87
What is herd immunity?
- When a large population is immune to a disease, then the spread of that pathogen is significantly reduced.
88
What is antigenic variability?
- Where the tertiary structure of antigens changes so the vaccine can no longer be effective against a particular disease. - Pathogens mutate to have different antigens so it is no longer recognised by the immune system.
89
What is active and passive immunity?
- Active immunity is the triggering of immune system by exposure to antigens - Passive immunity is the introduction of antibodies from an outside source
90
What is natural active?
- Infection and recovery
91
What is natural passive?
- Antibodies recieved from mother via breast milk or placenta
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What is active artifical?
- Vaccination by a jab
93
What is passive artificial?
- Injection of antiserum containing antibodies
94
Differences between active and passive immunity?
- Active provides long term immunity but passive is short term immunity - Active produces memory B cells but passive doesn't - Passive is quicker
95
What is the role of a reverse transcriptase enzyme?
- An enzyme that catalyses the production of DNA from RNA.
96
How does HIV replication happen?
1) HIV binds to host T helper cell receptor via the attachment protein 2) Viral capsid and host cell membrane fuse and RNA and reverse transcriptase enters. 3) Reverse transcriptase makes DNA 4) Double stranded DNA is mad and inserted into host cell's DNA 5) Transcription into mRNA, making new proteins that are viral and then these are released and infect other areas.
97
Why is HIV a bad thing?
- Kills T helper cells leading to insufficient T helper cells - Less T helper cells means less B cells can bind to their antigens to produce antibodies - Memory cells are infected and destroyed
98
Why are antibiotics insufficient against viruses?
- Antibiotics target bacterial enzymes however viruses use human enzymes which are a different structure - Viruses do not have sites where antibiotics can work
99
What are monoclonal antibodies?
- Antibodies produced from a single group of genetically identical B cells
100
Why are monoclonal antibodies specific?
- They have binding sites that are only complementary to one antigen
101
What are the uses of monoclonal antibodies?
E.G cancer cells 1) Monoclonal antibodies are produced which are specific to receptors on cancer cells 2) Antibodies attach to the surface of cancer cells and block chemical signals that stimulate uncontrolled growth. (direct monoclonal antibody therapy)
102
Why are monoclonal antibodies so effective?
- Specific to one type of cell - Not toxic - Fewer side effects as there doesn;t need to be used in large doses
103
Ethical issues of monoclonal antibodies?
- Animals are used and may suffer - Vaccines may not be fairly distributed to people - Cancer is deliberately induced in the animals
104
Why is the ELISA test useful?
- We can measure the presence and quantity of a protein in a sample.
105
What can the ELISA test for?
- Infections - Allergies - Levels of a drug
106
Outline the ELISA test...
1) Antigen is bound to the surface of a well. 2) Antibody specific to the antigen is added and will bind if present (enzyme linked, enzyme attached) 3) rinse the well to remove unbound antibodies 4) Substrate solution is added, substrate binds to enzymes 5) Causes a colour change 6) colourimeter detects the amount of colour change which correlates to the the amount of antigen present.
107
What is the purpose of membranes?
- Act as barriers between cells and their environment as well as between the cytoplasm and the organelle
108
What is the fluid mosaic membrane?
- The structure of all cell membranes is the same being made of lipids, proteins and carbohydrates - It is fluid as phospholipids are constantly moving and mosaic because it is packed full of proteins.
109
What are intrinisc proteins?
- Span the two sides of the membrane
110
What are channel proteins?
- Water filled tubes which allow water soluble molecules to pass through
111
What are carrier proteins?
- Proteins that bind to molecules or ions and change their shape to move them across.
112
What are extrinisc proteins?
- Mechanical support for the membrane, acting as cell receptors for molecules such as hormone and act as receptors to identify other cells
113
What are glycoproteins
- Proteins with carbohydrates attached - They act as receptors for molecules such as hormones and neurotransmitters. - Allows cell adhesion - Allow cell recognition
114
What are glycolipids?
- Lipids with carbohydrates attached - Act as recognition sites - Help stability of the membrance - Cell adhesion
115
What is cholesterol?
- A type of lipid - Restricts the movement of other molecules in the membrane which causes rigidness - They can bind to phosopholipid fatty acid tails to pack closely together.
116
Why is the centre of the bilayer being hydrophobic important?
- The centre of the bilayer is hydrophobic so no water soluble substances pass through such as ions
117
What are the transport mechanisms?
- Diffusion - Facilitated diffusion - Active transport - Osmosis - Co-transport
118
What factors affect the rate of diffusion?
- Concentration gradient - Surface area - Temperature - Diffusion distance - Size of particle - Number of channel/carrier proteins
119
What is water potential?
- The pressure created by water molecules - The likelihood of water molecules to move in or out
120
What is hyper and hypotonic?
- Hypertonic the movement of water into a cell causing bursting - Hypotonic is the movement of water out of a cell (remember hyper movement into not out)
121
What is active transport?
- The movement of molecules or ions from a region where they are in low concentration to one where their concentration is higher, against a concentration gradient.
122
What is co transport?
- Takes place in the ileum where concentration is too low for diffusion to occur.
123
Outline the process of co transport...
1) Sodium ions are actively transported out of the epithelial cells into the blood via a sodium potassium pump in exchange for a potassium ion (carrier protein) 2) Low conc of sodium ions creating diffusion gradient of sodium from the lumen 3) Sodium ions diffuse into epithelial cells via a sodium-glucose co transporter protein and as it does this is couple with a glucose molecule to take more glucose into the epithelial cell too. 4) Concentration of glucose inside cell increases too. 5) Glucose diffuses into the blood via facilitated diffusion
124
How are algal cells similar to plant cells?
- They have the same organelles as well as a cell wall and chloroplast
125
How are fungal cells different to plant cells?
- Cell walls are made of chitin, not cellulose - Fungal cell don't have chloroplasts
126
Go over the structure of Nucleus, mitochondria, chloroplasts and their functions (easy stuff)
..
127
Structure of the golgi apparatus..
- Group of fluid-filled, membrane bound flattened sacs - Vesicles are often seen at the edges of the sacs
128
Function of the golgi apparatus
- Processes and packages new lipids and proteins - Also makes lysosomes
129
Structure of the golgi vesicle?
- Small, fluid filled sac found in cytoplasm which is surrounded by a membrane and produced by golgi apparatus
130
Function of golgi vesicle?
- Store lipids and proteins produced by the golgi apparatus and transport them out of the cell via exocytosis
131
Structure of lysosome?
- Round organelle surrounded by a membrane with no clear internal structure
132
Function of lysosome?
- Contains enzymes that hydrolyse invading cells or worn out components
133
Structure of ribosomes?
- Small organelle - Made of protein and rRNA
134
Structure of the rough ER?
- System of membranes enclosing a fluid filled space - Consistent with the nuclear envelope and covered with ribosomes
135
function of the rough ER?
- Process and packages proteins made at the ribosome.
136
Structure of smooth ER?
- Similar structure to the rough ER but no ribosomes
137
Function of smooth ER?
- Synthesise and processes proteins and lipids
138
4 key points about prokaryotic structure?
- The cytoplasm has no mmebrane bound organelles - Ribosomes are much smaller than in eukaryotic cells (70s only) - Single ciruclar DNA molecule that is free in the cytoplasm and isn't associated with proteins - Cell wall supports the cell and prevents change in shape made of muerin (peptidoglycan)
139
What are other unique features of prokaryotic cells?
- One or more plasmids (small loops od DNA which contain genes for things such as antibiotic resistance and are used to transfer genetic material between bacterium) - Slime capsule helps protect bacteria from attack by other cells and helps bacteria group together for further protection - Flagella allow the bacteria to move
140
Key differences between eukaryotic cells and prokaryotic cells...
- Prokaryotic have no nucleus but eukaryotic do - Prokaryotic have plasmid but eukaryotic don't - Prokaryotic have smaller ribosomes than eukaryotic cells - Prokaryotic cells have a peptidoglycan cell wall but eukaryotic have a cellulose cell wall in plants
141
Structure of viruses?
- Acellular and non-living - Genetic material - Capsid - Attachment proteins
142
How do viruses replicate?
- Bind to complementary receptor proteins using attachment proteins - Inject genetic material into the cell - Host cell's enzymes and ribosomes are used to make new viral proteins that assemble into viruses which are released from the host and go on to hijack other cells.
143
Light microscopes vs electron microscopes regarding (how they work, magnification, resolution, live speciment)
Light: Uses a beam of light Electron: Uses a beam of electrons Light: Max magnification of x1500 Electron: Max magnification of x1,500,000 Light: Max resolution (0.2 micrometres) Electron: Max resolution (0.002 micro metres) Light: Live specimen yes Electron: Live specimen no because speciments have to be contained in a vacuum as the air particles would absorb electrons and interfere with results.
144
What organelles can light microscopes not see?
- Cannot see ribosomes, endoplasmic reticulums and lysosomes as theyre too small for the 0.2 micrometre resolution
145
Outline 5 features of the Transmission Electron Microscope...
- Electrons are transmitted through the speciment - Show you the internal structure of organelles - Higher resolution - Can only be used for thin speciments - 2D images
146
Outline 5 features of the Scanning electron micrsocope?
- Scan a beam of electrons across the speciment - Only show the specimen's surface - Lower resolution - Can be used for thick speciments - 3D
147
Define resolution and magnification (search)
...
148
What is cell fractionation?
- Process by which cells are broken up and their organelles are separated out
149
What is homeginisation?
- Breaking up cells using a homogeniser or by vibrating them
150
Why must solutions be cold, isotonic and pH buffered?
Cold - reduces enzyme activity which may hydrolyse organelles Isotonic - To prevent the movement of osmis which may burst or shrink the cell Buffered - To maintain pH and prevent ay damage to organells or enzymes
151
What is filtration?
- Resultant fluid is filtered to remove any unbroken cells or cell debris
152
What is ultracentrifugation?
- Different organelles in the filtered solution are separated out in a centrifuge - Centrifuge spun at low speed forming pellet (individual organelle) and supernatent (remaining liquid) - Spun at higher speed
153
Order of organelle density
Nucleus, mitochondria, lysosomes, ER, ribosomes
154
2 types of cell division
- mitosis, meiosis
155
Overall purpose of mitosis?
- Produces 2 genetically identical daughter cells
156
2 things mitosis is needed for?
- Growth - Repair
157
What happens in prophase?
- Chromosomes condense, get shorter and fatter - Nucleolus disappears - Nuclear envelope breaks down - Centrioles move to opposite poles
158
What happens in metaphase?
- Spindle fibres pull chromsomes to the equator of the cell
159
What happens in anaphase?
- Centromeres divide separating each pair of sister chromatids - Spindle fibres shorten and pull each chromatid to opposite poles where they are referred to as chromsomes
160
What happens in telophase?
- Chromsomes lengthen again - Spindle fibres disintegrate - Cytoplasm divides to form two sepearate cells.
161
What is interphase?
- Part of the cell cycle - Period of cell growth and DNA replication
162
What is G1
- Cell grows and increases in volume when new organelles are made
163
What is S?
- Cell replicates its DNA
164
What is G2?
- Cell continues growing and synthesises enzymes and structures needed for mitosis
165
Calculation for time taken for each stage?
Number of cell in phase/total number undergoing mitosis x time taken for one cell cycle
166
Mitotic index
Number of cells undergoing mitosis/Total number of cells x100
167
What is cancer?
- Uncontrolled cell division by mitosis
168
How do bacteria divide?
- Binary fision 1) Replication of DNA and plasmids 2) circular DNA strands move to opposite poles 3) Cytoplasm divides and new cell walls grow to divide the original cell into 2 identical daughter cells, each with 1 copy of the ciruclar DNA and a variable number of plasmids.
169
170
171
What is the rend of surface area to volume ratio in organisms?
- As organisms increase in size, its volume increases faster than its surface area so the SA:V ratio decreases
172
What is the SA:V ratio of single celled organisms?
- Large surface area to volume ratio - Rely on solely diffusion - Diffusion is fast because substances only travel small distances.
173
What is the SA:V ratio of multicellular organisms?
- Small surface area:volume ratio - Cannot rely on diffusion of substances through its surface to meet needs of the organism.
174
How have multicellular organisms adapted to their SA:V ratio?
- Large surface area - Good blood supply - Thin membranes
175
What is the main system for gas exchange in insects?
- The Tracheal System
176
What is the process of gas exchange in the tracheal system?
- Oxygen diffuses down a concentration gradient towards the cells. - Tracheae branch off into tracheoles, which have thin, permeable walls that border respiring cells. - Oxygen diffuses from branches directly to respiring cells - CO2 diffuses from cells towards spiracles, to be released into the atmosphere.
177
WHy do fish need an adapted gas exchange system?
- Much lower concentration of O2 in water than in air - Diffusion of O2 and Co2 is slower in water.
178
How are fish gas exchange systems adapted?
- Fish have gills which are gas exchange organ, adapted to overcoming these problems
179
How does water enter fish
- Fish open their mouths and allow the water to flow through the gills, and out via the operculum (gill cover)
180
How are fish adapted for gas exchange
- Each gill is made of filaments providing a large surface area -Lots of lamellae - One cell thick provides a short diffusion pathway - Good blood supply - Maintains a favourable concentration gradient.
181
What is the counter current system?
- Blood flows through the llamellae in the opposite direction to the flow of water.
182
Why is the counter current system important?
- Maintanance of a favourable O2 concentration gradient between water and blood across the entire length of the gill lamellae.
183
Where does most photosynthesis take place?
- Palisade mesophyll cells contain lots of chloroplasts.
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What is the role of the upper epidermis?
- Protects internal tissues from mechanical damage or the invasion of bacteria
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How are leaves adapted for gas exchange?
- Stomata allow the diffusion of gases in and out of the leaf. - Many stomata means a short diffusion distance - Air spaces allow for diffusion of gases - Large surface area means greater rate of diffusion.
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How do plants control water loss?
- By regulating the opening and closing of stomata by guard cells - This is affected by light intensity, water avaliability and carbon dioxide concentration
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What happens to the stomata at night?
- Stomata closes as the cell can't photosynthesise so there is no need for CO2 and O2 to diffuse in and out of the leaf so closing the stomata helps prevent unneccesary water loss.
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Outline the process of gas exchange in the lungs
1) As you breathe in, air enters the trachea 2) Splits into 2 bronchi 3) Split into bronchioles 4) Lead to alveoli 5) Uuse diaphgram, internal and external intercostal muscles work together to allow ventilation
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What is the path taken by CO2 and O2 at the alveoli?
- O2 diffuses out of the alveoli across the alveolar epithelium + capillary endothelium, into haemoglobin in the blood - CO2 diffuses into the alveoli from deoxygenated blood and is breathed out
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What is important about red blood cells slowing down in capillaries?
- They are pressed against the capillary wall which : - allows time for diffusion of gases - increases the surfaces area avaliable of red blood cells exposed - Minimises the diffusion distance
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Process of inspiration?
1) External intercostal muscles contract 2) Internal intercostal muscles relax 3) Diaphgram contracts 4) Volume of cavity increases 5) Pressure of thoracic cavity decreases 6) Air flows from of an area of high pressure to an area of low pressure down a concentration gradient
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Is inspiration an active or passive process?
- Active process becuase it involves the contraction of muscles
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Outline the process of expiration?
- External intercostal muscles relax - Internal intercostal muscles contract - Diaphgram relaxes - Pressure increases - Volume decreases - Air moves out of the lungs
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How is the alveoli adapted for gas exchange?
- Alveolar epithelium is only 1 cell thick which shortens the diffusion distance - Large surface area for gas exchange - Rich blood supply (Maintains the conc gradient) - Ventilation
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WHat is digestion
- Hydrolysis of large biological molecules into smaller biological molecules that can be absorbed
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What is involved in the digestion of carbohydrates?
- The hydrolysis of glycosidic bonds
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What is the role of amylase?
- Amylose hydrolyses starch into maltos, which then is hydrolysed by the disacchardie maltase
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Where does carbohydrate digestion happen?
- Salivary glands - Small intestine (Note: Pancrease releases enzymes which are then released into the small intestine)
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Where are membrane-bound disaccharides found?`
- Enzymes attached to the cell-surface membranes of epithelial cells lining the ileum
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How are monosaccharides absorbed
- By the process of active transport via a co-transporter protein
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How is fructose abosorbed?
- Fructose is absorbed via facilitated diffusion through a different transporter protein
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How are lipids digested?
- Through the hydrolysis of ester bonds
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How is lipase enzymes produced and secreted?
- Lipase enzymes are produced by the pancreas and secreted into the small intestine
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What is the role of bile salts?
- Reduce the surface tension between lipids and water which splits the larger drops of lipid into smaller ones (emulsification) - This in turn increases the surface area for lipase enzymes to act upon
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How are micelles formed?
- When the bile salts and fatty acids and glycerol stick together - This moves the products to the epithelial cells.
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How are proteins digested?
- By protease enzymes hydrolysing peptide bonds to form amino acids.
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What are the 3 types of proteins and where are they found?
- Endopeptidases (Found within peptide bonds) - Exopeptidases (Found on the outside of peptide bonds) - Dipeptidases (Found in between 2 peptides)
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How are proteins absorbed?
- Via co-transport, in a similar way to glucose and galactose - Via sodium ions with a co-transporter protein
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What are the adaptations of the ileum?
- Ileum is very long which allows time for diffusion and active transport of products of digestion - Lining is folded into millions of villi which increase the surface area for diffusion - Cells are one cell thick to decrease the diffusion distance - Rich blood supply in the villi which maintains a concentration gradient
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What protein structure is haemoglobin?
- Quaternary structure
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How many O2 molecules can Hb hold?
- 4 O2 molecules
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WHat is the partial pressure ?
- Measure of the concentration
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Where is pO2 high and low?
high at the lungs lower at respiring tissues
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What does affinity mean?
- affinity means that the level of binding
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When does oxygen load onto haemoglobin?
- Loads onto Hb when there is a high partial pressure of oxygen (lungs)
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When does oxygen unload?
- When there is a low pO2 (respiring tissue)
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What is saturation?
- How muich oxygen is being carried by haemoglobin
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Why is the oxygen dissociation curve sigmoid?
- The joining of the first oxygen molecule is slow but once it has happened, Hb changes shape, making it easier for other O2 molecules to bind.
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What is the bohr effect?
- High pCO2 lowers Hb's affinity for oxygen as oxygen unloads (lowers blood pH) - Faster rate of respiration leads to more O2 being unloaded for a given pO2.
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How do different organisms have different affinities for O2?
- Depends on activeness - Depends on metabolic rate - Depends on altitude (E.G. organisms living at altitude have higher affinities for O2 so it loads more readily)
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What is the circulatory system in multicellular organisms?
- Double Closed Circulatory System (goes through the heart twice) - Arteries carry blood away from the heart - Veins carry blood to the heart
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What is pulmonary ciruclation?
- Transport of blood to the lungs
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What is systemic circulation?
- Transport of blood to the rest of the body
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Where in the heart is blood brought back?
- Vena Cava
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Where in the heart is blood taken to the lungs?
- Pulmonary artery
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Where in the heart is blood recieved from the lungs?
- Pulmonary vein
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Where in the heart is blood transported to the rest of the body?
- Aorta
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How is the left ventricle adapted for its function?
- Its function is to transport blood to the rest of the body so had thicker and more muscular walls than the right ventricle because it needs to contract more powerfully and generate higher pressures
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Why do ventricles have thicker walls than atria?
- Thicker walls as they have to force blood out of the heart wheras atria only have to push the blood small distances
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When do valves open?
- When pressure is higher behind the valve it opens
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When do valves close?
- When pressure is higher in front of the valve
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Why are valves important?
- They prevent any backflow of blood which means blood only travels one direction
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Why is the heart muscle described as myogenic?
- It can contract on its own without nerve impulses
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Where is the contraction of the heart first initiated?
- In the sinoatrialnode within the right atrium - Signals are then delayed at the AVN - Signal passes to the heart apex - Signals are spread throughout the ventricles
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What happens when the atria contract?
- Volume of blood decreases - Pressure of blood increases - Blood is forced into the ventricles
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What happens when the ventricles contract?
- Volume of ventricles decreases - Pressure of ventricles increases - Atrioventricular valves shut - Semi-lunar valves open
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What is the function of arteries and arterioles?
- Carry blood away from heart to tissues
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What is the structure of arteries and arterioles?
- Thick walls, small lumens, folded endothelium allows the arteries to stretch - Muscular fibres can constrict and dilate to change the level of blood flow.
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What is the function of capillaries?
- Allow the exchange of materials between the blood and cells via tissue fluid
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What is the structure of capillaries?
- One cell thick - Form a capillary bed so a large SA - Found near cells at exchange surfaces so a short diffusion distance
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What is the function of veins?
- Carry blood from tissues to the heart
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What is the structure of veins?
- Large lumen - Thin muscular walls
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What is tissue fluid?
- Fluid that surrounds cells in tissues
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How do substances move into the tissue fluid?
- Move out of the capillaries and into tissue fluid by pressure filtration
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What substances make up and don't make up tissue fluids
Make up: - Oxygen - Carbon dioxide - Water - Glucose - Nutrients - Hormones Don't make up: - LArge proteins - Red blood cells
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How does hydrostatic pressure force fluid out of the blood?
- At the arteria end, hydrostatic pressure is greater than hydrostatic pressure in tissue fluid, so fluid is forced out the blood
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How does osmosis remove tissue fluid?
- Venule end of the capillary experiences a decrease in water potential due to smaller volume and an increase in concentration of large proteins which were too large to leave the blood. - As a result, water enters capillaries by osmosis
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How is excess tissue fluid drained?
- Lymph vessel transport the tissue fluid back into the blood
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Role of the xylem?
- Tissue that transports water and dissolved mineral ions from the roots, up the stem and to the leaves.
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Role of the phloem?
- Tissue that carries organic substances from the source to the sink in plants
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5 structure points about the xylem?
- Long, hollow tubes - Formed from dead cells, joined together - One way only - No end walls between cells - Walls contain lignin for strength which helps provide structural support for the plant
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What is cohesion?
- Water molecules being attracted to other water molecules by hydrogen bonding
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What is the transpiration stream?
- Movement of water through xylem from roots to leaves
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Outline the cohesion-tension theory...
1) Water transpires from leaves and reduces the water potential in leaf cells so water is drawn out of the xylem by osmosis 2) Creates tension as more water needs to be drawn up through the xylem 3) Therefore more water enters the roots by osmosis as the WP in root cells decreases.
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4 factors affecting transpiration
- humidity - temp - wind - light intensity
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How to investigate transpiration?
- Using a potometer - Shoot draws up water from potometer - Measure how far the water bubble moves towards the plant so we can caluclate how much water is drawn up - Reservoir adds water to move the air bubble back and fourth.
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What is the source>
- Where sucrose is formed
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What is the sink?
- Where sucrose is needed
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Structure of the phloem?
- Sieve tube elements (end to end to form long tubes so that dissolved substances can pass) - no nucleus and no organelles - Companion cells provide ATP for the transport of sucrose
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How is the source to sink concentration gradient maintained?
- By enzymes which monitor the amount of solute at sinks and hydrolyse when necessary.
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What is the mass flow hypothesis?
- Sucrose is actively transported from cells in the source into the phloem sieve elements (done by companion cells, which have mitochondria) - This lowers WP of the phloem, causing water to enter by osmosis. (increased hydrostatic pressure) - At the sink end, sucrose is actively transported out of the phloem into sink cells - WP of phloem increases so water goes back into the xylem (decreased hydrostatic pressure) - Creates a pressure gradeint that pushes solutes towards the sink
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Evidence for and against mass flow?
FOR: - Pholem is removed and a bulge forms due to pressure, the concentration of sucrose is higher above the bluge rather than below bulge suggesting the sucrose moves down the bulge. - Radioactive tracers incorportate into glucose which is converted into sucrose, sucrose moves by translocation and the movement is tracked by radiocative tracers. AGAINST: - Sucrose moves at a standard speed that doesn't appear to change due to the concentration gradient .
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Prokaryotic vs Eukaryotic (3 things)
Short vs long Circular vs Linear Not associated with proteins vs Associated with histones
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How is the mitochondria and chloroplasts of eukaryotics similar to prokaryotics?
- Contain 70S ribosomes - Circular DNA - Not associated with histones
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What is a gene?
- Short section of DNA that codes for the amino acid sequence of a polypeptide or a functional RNA
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What's the locus?
- Poisition of a gene
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What is the genome?
- Full set of genes in a cell
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What is a proteome?
- Full range of proteins a cell is able to produce
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What is the universal code?
- Same codons in DNA/RNA code for the same amino acid in almost every organism.
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What is non-overlapping?
- Codons are read one at a time so each base is read just once
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What is degenerate?
- More than one codon codes for each amino acid
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What are intron
- Sections of genes that don't code for anything and are non-coding sequences.
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What are non-coding repeats?
- The same bases repeated for a long time
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What is the role of messenger RNA?
- Transfers genetic information from the DNA to ribosomes, where it acts as a template for protein synthesis
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What is the structure of mRNA?
- Very long, single polynucleotide strand - Polymer of RNA nucleotides - Possesses information in the form of codons - determines the amino acid sequence of a polypeptide
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What is the role of transfer RNA?
- Transfers amino acids that are used to make proteins to ribosomes
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What is the structure of tRNA?
- Shorter, single polynucleotide strand - Hydrogen bonds between specific base pairs so the tRNA molecule folds into a cloverleaf shape - One end (specific sequence of three bases (anticodon) - Other is the amino acid binding site.
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What is transcription (one sentence)
- Production of mRNA from DNA
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Outline transcription...
1) RNA polymerase (with a DNA helicase attached to it) binds to the start of the gene and begins to unwind the DNA, exposing some of the bases (breaks the hydrogen bonds) 2) Free RNA nucleotides bind by hydrogen bonding to their complementary bases, RNA polymerase adds each nucleotide to the mRNA polynucleotide chain by forming a phosphodiester bond. 3) recoiled into a double helix and when RNA polymerase reaches stop triplet code, it detaches from DNA and the production of mRNA is complete
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What is translation in one sentence?
- The production of polypeptides from the sequence of codons carried by mRNA
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Outline translation in protein synthesis...
1) A ribosome becomes attached to the start codon at one end of the mRNA 2) tRNA molecule with an anticodon complementary to the first codon on the mRNA attaches itself to mRNA by complementary base pairing 3) Second tRNA molecule attaches itself to the next codon in the same way 4) 2 amino acids attached to the tRNA molecules joined by peptide bond (enzyme+ATP, which is hydrolysed to provide energy) 5) Ribosome moves along the mRNA and another codon becomes available for the next tRNA to bind, carrying a third amino acid. 6) tRNA disccoicates, leaving its amino acid behind. 7) process repeats until polypeptide is created and the ribosome reaches a stop codon
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What are mutations?
- The change in the DNA base sequence of chromosomes
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What is base deletion and substitution?
- Removal of a base - Substituting different bases
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Why are base deletions harmful?
- Deletions cause frame shifts that change the whole amino acid sequence leading to a potentially dysfunctional polypeptide
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Why are base substitutions less harmful?
- BEcause of the genetic code being degenerate, not all base substitutions cause a change in the sequence of encoded amino acids, as the new codon may code for the same amino acid
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What are mutagenic agents?
- Agents that increase the rate of mutations - UV - X-rays - Viruses/Bacteria - Some chemicals such as methyl groups
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What happens in meiosis?
- 1 cell divides to produce 4 haploid daughter cells - Each daughter cell is genetically different and has half the number of chromosomes of the parent cell
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What is a zygote?
- Single cell formed which contains half the chromosomes from the father and half from the mother.
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What are homologous chromsomes?
- Same gene and same loci but may have different alleles
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Difference between a chromosome and double armed chromosome?
- a single chromosome is present before replication but becomes double armed after replication when they are formed from 2 sister chromatids.
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Why is meiosis needed for sexual reproduction?
- Because it produces daughter cells with half the number of chromosomes of the parent cell.
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How does the meiosis process happen?
- Before meiosis, the DNA unravels and replicates so there are two copies of each chromosome, called chromatids - DNA condenses to form double armed chromosomes, each made from two sister chromatids, joined by a centromere. - Meoisis 1 and 2 condenses the chromatids
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How does meiosis cause variation?
- Independent assortment - Each homologous pairs is made up of chromosome from mother and father, during meiosis 1, it is random which chromosome from each pair ends up in which daughter cell - Crossing Over - Homologous pairs of chromosomes come together and pair up with chromatids twisting around each other and bits of chromatid crossing over - Crossing over means that the four daughter cells produced certain chromatids with a different combination of alleles (variation)
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What is non-disjunction?
- Mutation which causes an addition or deletion of chromosomes, leading to an uneven distribution of chromosomes.
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Polyploidy vs Aneuploidy?
- Aneuploidy involves having abnormal numbers of chromosomes involving the loss or gain of one or a few chromosomes. - Polyploidy involves having multiple complete sets of chromosomes, often more than two.
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What is genetic diversity?
- The number of different alleles of genes in a population
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What is natural selection?
- The increased likelihood that organisms with certain alleles will survive longer than organisms without that allele.
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What factors increase genetic diversity?
- Genetic mutations lead to new alleles - New alleles being introduced into a population - Meiosis - Random fertilisation
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How does natural selection work?
1) A mutation happens in the population causing new alleles 2) Mutations are harmful causing organisms to die out however, an allele sometimes gives an advantage, leading to the increased chance of survival and reproductive success. 3) These individuals then pass on their advantageous alleles to the next generation 4) Over many generations, the new allele increases in frequency in the population
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Directional vs Stabilising
Directional: Extreme alleles are more likely to survive and reproduce (E.G antibiotic resistance in bacteria) Stabilising: The more common allele is more likely to survive and repoduce (E.G human birth weight)
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What are 3 adaptations that arise because of natural selection?
- Behavioural adaptations: The way an organism acts that increases its chance of survival - Physiological: Processes inside the body that increase chances of survival - Anatomical: Features of an organism's body that increase its chances of survival
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What is a species?
- A group of organisms that can interbreed to produce fertile offspring
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What is courtship behaviour
- A necessary precursor to successful mating - This is because it allows individuals to recognise and reproduce with individuals of their own species, making reproduction much more successful. - Visual, auditory, chemical, tactile (species specific) (classifiy orrganisms using courtship behaviour as the more closely related a species is, the more similar their courtship behaviour is)
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What is heirarchical?
- Smaller groups are placed within larger groups, with no overlap between groups
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Go over phylogenetic trees
....
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Phylogenetic classification
DKPCOFGS
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What is biodiversity?
- The variety/frequency of different species within a habitat
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Species richness vs Index of diversity
- Species richness is a measure of the number of different species in a community - Index of diversity puts a figure to biodiversity so we can numerically compare
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Index of diversity
N(N-1)/Sum of n(n-1)
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Farming techniques that reduce biodiversity?
- Deforestation removes vegetation - Overgrazing (removing hedgerows which removes trees and species) - Pesticides and herbicides - kills pests and weeds which would compete with crops - Overcultivation of monocultures means it is more efficient to grow just one crop which directly reduces diversity.
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Originally, how was genetic diversity measured?
- Looking at the frequency of measurable or observable characteristics
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How is diversity measured in modern day?
- The direct study of base sequences of DNA - mRNA - Amino acid sequences
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Why is it possible to measure diversity within the same species?
- Same genes but different alleles meaning most variation is a combination of both genetic and environmental factors
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How do we indicate closeness?
- By the amount of differents in DNA, mRNA, amino acid bases
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Limitations of amino acid measurements?
- Degenerate code means that there will be differences in codons but the same amino acid can be formed - Mutations can be subtle as larger changes would change the teritary structure meaning a dysfunctional protein. - You have to find a common protein - Single gene codes a single protein which gives us a small insight
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How to investigate diversity?
- Take random samples of a population - Collect data (size of tree e.g) - Calculate the mean - Calculate standard deviation of that mean (spread of values about the mean)
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What are stimuli?
- Internal/external changes to the environment
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What are 3 different responses?
- Tropisms - Taxes and Kineses - Simple reflexes
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What is a tropism?
- Growth response of a plant to a stimulus
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How are tropisms controlled?
- Growth factors such as hormones
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Where are growth factors produced?
- Produced in growing regions and move to other tissues, where they regulate growth in response to a direcitonal stimulus
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Phototropism vs Gravitropism?
Phototropism Shoots - IAA causes cell elongation Roots - IAA inhibits cell elongation - Light is detected by receptors in the shoot Positve phototropism: - IAA diffuses to the darker side - Concentration of IAA increases on this side - IAA causes cells on the darker side to elongate so the shoot bends towards the light Negative phototrpoism: - In roots, IAA does the opposite - IAA diffuses to the darker side (underside) - Cell elongation is inhibited, root bends downwards. Negative Gravitropism - IAA diffuses to lower side of the shoot - Concentration of IAA increases on the lower side - IAA causes elongation directly upwards Positive Gravitropism - IAA diffuses to lower side of the root - Inhibits cell elongation and root bends downwards.
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Taxis vs Kinesis
- Responses that maintain a mobile organism in a favourable environment Taxis - Organism moves towards/away from a directional stimulus Kinesis - Organism's movement affected by a non-directional stimulus such as humidity - Cause rate of turning to increase or decrease to move the organism away from the stimulus
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How do simple reflexes work?
- Receptor detects stimulus - Sensory neurone carries impulse from receptor to relay neurone - CNS processes response - Relay neurone carries impulse to the motor neurone - Motor neurone carries impulse from relay neurone to effector - Effector carries out response (muscle or gland)
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Why are simple reflexes important?
- FAST (Does not involve concious part of the braint because the impulse is carried directly from a sensory neurone to a motor neurone via a relay neurone. - LOCALISED - Target cells, stimulus produce same response - SHORT LIVED - Re uptake of neurotransmitter is rapid - Response is involuntary where the body cannot override it. (Aid survival by protecting the body from tissue damage and escape from predators)
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Different types of receptors
Baroreceptors (pressure) Chemoreceptors (chemical) Photoreceptors (light)
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Outline pacinian corpuscle
- Detect pressure/vibrations - Contain sensory neurone endings wrapped in tissues of lamella - Found in fingertips, soles, joints 1) Pressure cause lamellae to be deformed 2) Increase in pressure deforms stretch mediated sodium ion channels 3) Sodium ion channels open and sodium ions diffuse into the sensory neurone ending 4) Depolarises the membrane creating generator potential 5) AP triggered when threshold reached
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How is AP generated?
- Potential difference between inside and outside - Resting potential is -70mV when cell is at rest - When stimulus is detected, the membrane becomes more permeable so ions diffuse across it and the potential difference increases - Change in potential difference is called the generator potential - If the change is large enough and exceeds the threshold value, then an action potential is triggered.
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Outline how the retina responds to light?
- Light is detected by photoreceptors - Light is absorbed by optical pigments - Light bleaches the pigments, altering the membrane permeability to sodium ions - Generator potential is created and if large enough and over threshold, causes an action potential - Bipolar neurone connects to the optic nerve, taking the impulses to the brain
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Compare rods and cones?
- Rods have high sensitivity because many rods connect to 1 bipolar neurone so many weak generator potentials combine to reach threshold - Cones have low sensitivity to light as 1 cone connects to a bipolar neurone meaning it takes more light to reach the threshold and generate an action potential - Rods have low sensitivity to colour as they are ponly sensitive to light levels - Cones have high sensitivity to colour as there are 3 different types of cones representative of different colours - Rods have low visual acuity (how clearly you can see objects at a distance) because many rods connect to 1 bipolar neurone so light from 2 points close together can't be distinguished. - Cones have 1 cone connected to 1 bipolar neurone so separate impulses are sent, many action potentials triggered so the brain receives many impulses.
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What does myogenic mean?
- Muscle initiates contraction without nerves
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Heart contraction process
- SAN in right atrium sets the frequency at which the cardiac muscle cells contract, sending out regular electrical impulses to the atrial wall, causing atria to also contract. - impulse spreads from SAN across both atria, causing contraction simultaneously - Septum prevents impulses crossing - Impulses reaches AVN - AVN passes impulse to the Bundle of His fibres, which conduct the impulse down the Purkyne fibres - Impulse reaches the heart apex causing them both to contract simultaneously, from bottom up.
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Why is there a short delay during heart contraction
- To allow all the blood to empty from the atria before ventricles contract.
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How do we actually control heart rate?
- Done by the autonomic nervous system - Controlled by the medulla - Heart rate is changed in response to internal stimuli (blood pressure (barocreceptors) , chemicals in the blood (chemoreceptors) E>G carbon dioxide) - Sends electrical impulses to the medulla via sensory neurones which processes the info and sends the impusle to the SAN down the autonomic nervous system (sympathetic - increase heart rate (noradrenaline), parasympatheitc - decreases heart rate via acetylcholine (less frequent heart contractions)) Antagonistic
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where do noradrenaline and acetylcholine bind to?
- The SAN
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Structure of motor neurone
- Cell body - Dendrites (recieves electrical impulses) - Nucleus - Axon (transfers electrical impulses to synapse) - Myelin sheath (electrical insulation made of schwann cells) - Synapses
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How is the Resting potential established
- 3 sodium ions actively transported out - 2 potassium ions actively transported in via sodium-potassium pump - outside of axon is more positive than inside of axon - resting potential is -70mV
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How is the Action potential created
- Depolarisation involves stimulus exciting membrane so the cell membrane becomes more permeable to sodium ions - Sodium ion channels open allowing diffusion of sodium ions - Inside becomes more positive as potassium ion channels stay closed. - Repolarisation involves sodium ion channels closing and potassium ion channels opening so potassium ions diffuse out of the neurone. - Inside of neurone becomes more negaitve and voltage decreases back to normal level. - Hyperpolarisation involves potassium ion channels remaining open for a short time and too many potassium ions diffuse out of neurone - Resting potential is re established
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3 advantages of refractory period
Refractory period is the time delay which prevents ion channels from opening - Keeps action potential unidirectional - No overalp - Time limit to action potential frequency
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Myelination vs Unmyelination
- Myelination sees regular breaks in insulation (nodes of ranvier) - APs only occur at nodes of ranvier - APs jump via saltatory conduction between nodes of ranvier - Quicker nerve transmission, so less energy is needed from the sodium potassium pump
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All or nothing
- Action potential only happens if stimulus reaches threshold - Action potential is always the same size - Size of stimulus from frequency of impulses and neurones with a different threshold value
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Factors that affect speed of impulse
- Myelination - Axon diameter - less resistance to the flows of ions - Temperature - more kinetic energy
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What is a synpase?
- Junction between neurones or neurones and a muscle - Found at the ends of axons - Most use cholinergic synapses or neuromuscular junctions
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Outline transmission across a cholinergic synapse...
- Action potential arrives at synpatic knob of presynaptic neurone - Stimulates calcium ion channels to open allowing diffusion and influx of calcium ions, triggering vesicles to move to the membrane, releasing acetylcholine into the synpatic cleft - Acetylcholine diffuses across celft and binds to receptors on the post synpatic membrane so sodium ions diffuse into post synpatic neurone when sodium ion channels open. - If threshold reached, another AP is triggered.
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Why are synpases unidirectional?
- Synapses only travel in one direction because receptors are only found on the post synaptic membrane - Neurotransmitter is only made and released from pre synaptic neurone's side.
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What is summation?
- Low frequency action potentials cause insufficient amounts of neurotransmitter to be released to trigger a new action potential. Temporal - Presynaptic neurone connect to single postsynaptic neurones and releases neurotransmitter in timed intervals. - Spatial summation is when lots of pre synaptic neurone bind to the post synaptic neurone and exceed the threshold value, triggering an action potential.
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What is inhibition?
- When some synapses make it less likely for a new action potential to be triggered in the post synaptic neurone. - Neurotransmitters may bind to chloride ions causing them to open and negative ions influx the post synaptic neurone - May cause K+ channels to open so K+ diffuses out which lowers resting potential more negative
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Neuromuscular junction structure
- Synpase between motor neurone and muscle fibre. - Many neuromuscular junction along a muscle - Acetylcholine used
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Differences between cholinergic and neuromuscular..
Cholinergic: - Neurone to neurone - Motor sensory or relay - Excitatory or inhibitory - New AP is triggered - Ach binds to receptors on post synaptic neurone - Less receptors Neuromuscular junction: - Neurone to muscle - Motor neurones only - Excitatory only - AP ends here - Ach binds to the receptors on muscle fibres
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Effects of drugs on synapses
- Some may have similar shapes to neurotransmitters which bind to receptors and cause more action potentials - Act as blockers to prevent neurotransmitters from binding so fewer sodium ion channels open and fewer action potentials are triggered - Inhibit enzyme breakdown and prevent neurotransmitters from being broken down. b
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3 type of muscle
- Smooth - Cardiac - Skeletal
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Antagonistic meaning
- When one contracts, other relaxes
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Structure of skeletal muscle
- Muscle made of muscle fibres - Muscle fibres are made up of organelles called myofibtrils - Cytoplasm is called sarcoplasm - Sarcolemma has folds called T-tubules which help spread electrical impulse - Mitochondria - Sarcoplasmic reticulum stores calcium ions needed for contraction.
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Structure of myofibrils
- Bundles of thick and thin myofilaments that move past each other to make muscles contract - Myofilaments are Myosin (thick) and Actin (thin)
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What is the sarcomere?
- A single contractile unit
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What are Z lines
- Ends of the sarcomere
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What are A bands, I bands and H zones
- A bands are the length of the myosin - I band contains actin only - H zone contains myosin only - M line is the middle of myosin
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What shortens and stay the same length
- I band shortens when the thick filaments shortens as the thick and thin filaments slide past - H zone shortens - A band stay the same because the myosin filaments themselves do not shorten - Myofilaments stay the same length because they themselves don't shorten.
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How do myofibrils contract?
- Tropomyosin blocks myosin head from binding to the actin-myosin binding site so the myosin can't bind and myofilmanets can't slide past each other. - Action potential reaches neuromuscular junction - Acetylcholine diffuses over to the postsynaptic membrane and binds to receptors - Depolarisation of the sarcolemma - Wave of depolarisation spreads along T-tubules and sarcoplasmic reticulum. - Calcium ions bind to troponin, causing it to change shape which pulls tropomyosin out of the actin myosin binding site. - Myosin head binds to actin myosin binding site. (actinmyosin bridge) - Calcium ions activate ATP hydrolase which hydrolyses an ATP that is bound to the myosin head - Energy released causes the myosin head to bend which pulls actin filament along. - ATP attaches to myosin head and hydrolyses to break the bridge and then another myosin heads binds to a different actin myosin binding site further along.
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How to generate ATP?
- Aerobic respiration - Anaerobic respiration (slower ATP production) - ATP-Pcr system (Phosphocreatine provides an extra phosphate molecule for ATP synthesis) - ADP+PCr - > ATP + Creatine
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What is an issue with creatine?
- Small amounts so is used as short term energy.
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Slow vs Fast Muscle Fibres
Slow: - Works for long times without getting tired - Long periods of low intensity - Aerobic - Thin in diameter, red in colour - More widespread Fast: - Short periods of high intensity - Anaerobic - Thick in diameter but pale.
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What is homeostasis?
- The use of physiological control systems that maintain the internal environment within restricted limits. - Core temperature, blood glucose and blood pH are controlled. - Enzymes are important in regulating and increasing the rate of metabolic reactions so need to be controlled.
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Negative feedback outlined
- Restores systems to their original level - Stimulus is a change to the internal environment - Passed onto a receptor or coordinater - Nerve impulses or hormones are sent out leading to the reversal of the change
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How is the body prepared for all types of negative feedback?
- By having different negative feedback mechanisms meaning that can reverse the change in multiple directions from the norm. # - More control due to quicker responses.
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Positive feedback
- Increasing amplification from the norm - Blood clotting platelets releasing chemicals to activate more platelets.
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Factors that influence concentration of blood glucose
- Food intake, exercise and metabolic rate (glucose) (Exercise causes higher demand so does metabolism)
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3 processes involved in blood glucose control?
- Glycogenesis - glucose converted into glycogen (insulin) - Glycogenolysis - hydrolysis of glycogen into glucose (glucagon/adrenaline) - Gluconeogenesis - conversion of non-carbohydrates into glucose
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Role of the pancrease in blood glucose control
- Alpha (secrete glucagon by detecting low glucose) - Beta cells (secrete insulin by detecting high levels of glucose)
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Controlling blood glucose when too high/ too low?
- Insulin binds to specific receptors on CSM of target cells - Glucose channel proteins change shape and open allowing more glucose to enter cells from the blood - Triggers the fusion of channel-containing vesicles with the CSM of target cells, increasing number of glucose channel proteins in the membrane. - Activation of enzymes involved in the formation of glycogen (glycogenesis) LOW: - Glucagon binds to specific receptors on the CSM of target cells - Activates enzymes that convert glycogen into glucose (glycogenolysis) - Activates enzymes that convert glycerol and amino acids into glucose (gluconeogenesis)
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Second messanger model
- Glucagon/Adrenaline bind to receptors on CSM - This activates Adenylate Cyclase enzyme which catalyses cAMP from ATP - Protein kinase enzyme activates a chain of reaction (cascade effect) leading to glycogenolysis. (amplifies the effects)
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Type 1 vs Type 2
Type 1: - Pancrease doesn't produce enough insulin - Caused by an autoimmune disease that destroys b cells that produce insulin - Thirst is a symptom - So is excessive urination - Weight loss as you respire lipids - Treatment could be regular insulin injections. Type 2: - Pancreas stops responding to glucose - Glycoprotein receptors on the CSM of target cells are less responsive to insluin - Obesity - Management of diet and exercise and losing weight are ways to treat type 2.
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What is osmoregulation?
- Control of the water potential of the blood
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3 steps of osmoregulation?
- Ultrafiltration - formation of glomerular filtrate - Selective reabsorption - reabsorption of useful substances, such as glucose, amino acids, and ions - Osmoregulation
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How does ultrafiltration happen?
- Happens at glomerulus and bowman's capsule. - Efferent arteriole's are smaller in diameter than the afferent arteriole so the hydrostatic pressure in the glomerular capillaries increases and small molecules are forced through a 3 layer filter into the bowman's capsule. - 3 layer filter is made of collagen, endothelium, basement membrane and podocytes. - RBCs don't pass through - Glucose, water, amino acids, excess vitamins, urea pass through.
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How does selective reabsorption happen?
- Useful substances such as glucose, amino acids and ions return. - Pass back into blood capillaries wrapped around the PCT. - Done by co-transport.
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How does osmoregulation happen?
- At the loop of henle, medulla sees a loweringof water potential, so that water can be reabsorbed at the descending limb, the Distal Convoluted Tubule and collecting duct by osmosis. - Top of the ascending limb, sodium ions pumped into medulla by active transport, the ascending limbs is impermeable to water so water remains in the tubule which lowers the WP of the medulla. - Water moves out of the descending limb which is permeable to water by osmosis. - Descending limb is not permeable to ions so the filtrate becomes more concentrated. - Bottom of ascending limb - Sodium ions move into the medulla lowering WP of medulla even more. - Water is reabsorbed by capillary system.
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How much water is reabsorbed at the DCT and Collecting Duct
Low water potential in blood: - Detected by osmoreceptors in hypothalamus - Posterior pituitary gland stimulated to release more ADH into the blood. - ADH binds to receptors on the cell membrane lining the distal convoluting tube and collecting duct. - Triggers vesicles containing aquaporins to fuse with the cell surface membrane so more aquaporins are incorporated into the cell surface membrane of cells lining the DCT and collecting duct. - More water leaves by osmosis - Less water lost, urine concentrated.
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High water potential?
- High water potential is detected by osmoreceptors in hypothalamus - Posterior pituitary gland releases less ADH into blood - Less ADH molecules bind to receptors in cell surface membrane of cells lining the DCT and collecting ducts so less aquaporins are incorporated into the cell surface membrane of cells lining these tubules. - DCT and collecting duct less permeable to water so there are fewer places for water to leave by osmosis - More water lost - urine more dilute with water.
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Geneotype vs Phenotype
- Genotype is the genetic constitution of an organism - Phenotype is the expression of this genetic constitution and its interaction with the environment.
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What are alleles?
- Different forms of the same gene
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Dominant, recessive, co-dominant
- Dominant allele needs one allele present to be expressed in the phenotype - Recessive alleles need 2 copies present to appear in the phenotype - Co-dominant alleles are alleles that are both expressed in the phenotype.
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What is monohybrid inheritance
- Inheritance of one single character, controlled by a single gene.
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What is dihybrid inheritance?
- Inheritance of 2 characteristics, controlled by 2 genes - Involves 2 genes on 2 different chromosomes
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What is codominance
- Both alleles will be expressed in the phenotype
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What are the 3 possible phenotypes in codominance
1) Heterozygous of both alleles 2) Homozygous of one allele 3) Homozygous of another allele
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What are multiple alleles?
- Where some genes have more than 2 alleles, for example bloody type, where type a and b are codominant over allele iO.
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What is sex-linkage and what impact do Male's XY have?
- A gene that is found on a sex chromosome is said to be 'sex-linked' - Most genes on sex chromosomes are carried by the X chromosome so males are much more likely to show recessive phenotypes for sex linked genes as they only have one X chromsome .
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Why are females said to be carriers of recessive genes?
- Their dominant allele on their X chromsome may cancel out the recessive allele on the Y chromosome.
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What is autosomal linkage?
- Autosomal Genes that aren't found on sex chromosomes. - Genes found on the same autosome are said to be 'linked' - They will stay on the same chromosome during independent segregation in meiosis 1 and offspring will inherit these alleles together. - The more closely two genes are together on the same chromosome, the less liekly they'll be split by crossing over.
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Why is there a 3:1 ratio during autosomal linkage?
- Because the 2 linked alleles are inherited together.
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What is epistasis?
- The effect of one gene upon another. - 2 genes interact, so that one may be masked (prevented from being expressed) by another.
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Why does epistasis make it difficult for genetic investigations?
- If the effect of one locus is altered by the effect at another locus, power to detect the first locus is reduced.
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What is chi-squared used for?
- Used to compare the goodness of fit of observed phenotypic ratios with expected ratios - Can use to see if there is a dihybrid cross with linkage or no linkage
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Why is it rare to get exactly the expected phenotypic ratios?
- Random fertilisation of gametes - Epistasis - Small sample size
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What is a population?
- A group of organisms of the same species occupying a particular space at a particular time that can interbreed.
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What is the gene pool?
- The complete range of alleles present in a population.
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What is the allele frequency?
- How often an allele occurs in a population.
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What is the prediction of Hardy Weinberg?
- Mathematical model which predicts that allele frequencies will not change from generation to generation.
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Equations of Hardy Weinberg?
P+Q=1 (allele frequencies) p^2+2pq+q^2=1 (frequency of individuals) P - frequency of dominant alleles Q - frequency of recessive alleles 2pq - Homozygous
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What is Hardy Weinberg used for?
- To see whether the frequency of alleles is changing (if there is a selection pressure) - We know this as we can measure the frequency of individuals in a population
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Assumptions by the Hardy Weinberg
1) No natural selection meaning equal chance of survival and reproduction 2) Assumes there is no gene flow, introducing new genes or altering existing genes. 3) Assumes the population is large and isn't affected by genetic drift 4) Assumes that there are no mutations as allele frequencies don't get altered.
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What is disruptive selection?
- When two extreme genotypes at both ends of the range are the most common and likely to survive and reproduce.
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What is evolution?
- The change in allele frequencies in a population
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What is speciation
- When new species develop from a common ancestor
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Process of speciation
1) Geographic isolation by a natural barrier so reproductively isolated 2) Each population finds itself in a different environment, so experiences different selection pressures 3) Natural selection occurs and different alleles are of an advantage in the different populations. 4) Allele frequencies change in the two gene pools 5) Two populations are so genetically different that they no longer interbreed to produce fertile offspring.
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Allopatric speciation vs Sympatric speciation
Allopatric - physical reproductive isolation via a river or moutanin range Sympatric - Populations don't become physically separated but there are other reasons for reproductive isolation. (change in genetics, behavioural changes)
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Genetic drift
- When allele frequencies change due to chance - Not every individual will become a parent - Not the same offsprint when they do have kids. (as a result, chance rather than selection pressures dictates the likelihood of reproduction)
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Why does genetic drift have more of an impact in smaller populations?
- Because more individuals make up a larger proportion of the population.
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Relationship between natural selection and genetic drift?
- Work alongside each other in evolution but ultimately one may drive evolution more, depending on the size of the population. - Unlike natural selection, genetic drift doesn't cause better adaptation to the environment.
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Community
- Populations of different species in a habitat
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Ecosystem def
- Community and the non-living components of its environment
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What is a niche?
- A species' role within an ecosystem
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What happens when 2 species try to compete for the same niche?
- They will compete with each other.
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What is the carrying capacity?
- The maximum stable population size of a species that an ecosystem can support.
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Factors which affect the carrying capacity...
- The effect of abiotic factors such as light intensity, water availability, food availability, soil pH and temperature - Interactions between organisms such as inter and intraspecific competition - Predation
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Interspecific vs intraspecific competition
- Interspecific competition is when organisms of different species compete for resources. - Interspecific competition results in decreasing food availability for both species - So population size decreases as survival and reproduction is less likely. Intraspecific competition is when organisms of the same species compete with each other for resources
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How does predation affect carrying capacity
- Happens when one organism eats another. - As population size increase, predator population increases but as predators eat prey, their population will also decrease when food becomes scarce.
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How do we estimate population sizes using radnomly placed quadrats and on what type of organism?
Measure on slow moving organisms 1) Randomly place quadrats, being random to avoid bias. 2) Plot coordinates and use a radnom number generator to generate coordinates. 3) Place a 1mx1m quadrat and count the number of individuals, repeating many times. 4) Calculate the mean 5) Multiple mean x area.
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Why do we use quadrats?
- To measure gradual changes in population size across an area. - By taking samples at regular intervals along a transect. - More samples means more reliability.
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How do you estimate population sizes for mobile organisms.
- Mark-release-recapture 1) Capture a sample of individuals from the population by using E.g pitfall traps for insects. 2) Count the number of individuals and mark them in a harmless way 3) Return them to mix with the population 4) Capture second sample and count the number of individuals caught and number of those marked. 5) S1 x S2 divided by the number marked in S2
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Assumptions from mark-capture-release
- Marking doesn't affect survival by making them more visible to predators. - We also assume that marked individuals mix randomly and evenly with the population. - We assume no change in population size
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Outline primary succession
- Takes place on land that is newly formed or has been exposed 1) Pioneer species are those that live in extreme abiotic conditions that are hostile with little nutrients or water. 2) Adaptations allow them to live in these conditions such as asexual reproduction. Or the ability to fix nitrogen and tolerant to salt. 3) Pioneer species change the environemnt to make abiotic conditions less hostile such as eroding the rock and releasing minerals or adding more humus. 4) New species makes the environment more hostile for the previous species. 5) Over time conditions become less hostile and organisms becoming better adapted and outcompete older species. 6) Climax community is formed meaning the same species is stable and has been present over a long period of time.
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Outline secondary succession
1) Climax community is cleared in some way 2) Succession occurs quicker due to soil that contains seeds and nutrients to start a new community. 3) Pioneer species are larger plants therefore climax community reaches much quicker due to the lack of hostile conditions.
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Why would we prevent succession from continuing through conservation?
- We prevent succession from continuing to preserve an ecosystem in its current stage of succession. - If another species arrived and dominated, existing species would be outcompeted and die out.
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Methods of conservation
- Grazing and mowing to remove growing tips so no climax community is reached. - Managed fires so all species are wiped out and secondary succession will occur. Small species are pioneer species and grow more quickly than larger trees and shrubs.
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2 reactions of photosynthesis
- Light dependent - Light independent
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Structure of cholorplast
- Double membrane - Stroma - Thylakoid membrane - Granum - Linked by lamellae
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How does the structure of the thylakoid membrane relate to the light depedent reaction?
- Large surface area for the attachment of: Chlorophyll Electron carriers Enzymes - Permeable membrane for gas diffusion - Fluid in the strom contains all enzymes required to make carbohydrates for the light indepedent reaction.
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Light dependent reaction?
- Photoionisation - Chlrophyll absorbs lightt, electrons are excited and are donated to an electron carrier that moves the electrons down the chain. -Photolysis - Electrons are replaced by the splitting of water into hydrogen, oxygen and electrons. Chemiosmosis - Excited electrons lose energy as they move down the ETC. - This energy is used to pump Hydrogen ions into the thylakoid space via a proton pump. - Creates a favourable concentration gradient for the diffusion of H+ ions into the stroma via ATP synthase, which catalyses ADP+Pi to form ATP. Formation of NADPH - Electrons from ETC and H+ ions that have diffused through ATP synthase are used to form Reduced NADP.
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Light independent reaction
- occurs in the stroma - Rubisco catalyses reaction of RuBP and CO2 to temporarily give an unstable 6-carbon compound which breaks down into 2 GP molecules. - GP is reduced to TP using NADPH, using energy from ATP hydrolysis. - TP is converted into useful organic compounds such as glucose and amino acids - In one cycle 10 TP molecules are converted into RuBP but only 2 TPs are converted into useful compounds.
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What factors limit the rate of photosynthesis
- Temperature (Involve enzymes which require optimum temperatures) - CO2 concentration as the light independent reaction requires a source of carbon so fixation is slowed. - Light intensity as energy from sunlight is needed to excite electrons in chlorophyll
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What is glycolysis?
- Conversion of glucose into pyruvate 1) Occurs in the cytoplasm 2) Glucose is converted in glucose phosphate via ATP hydrolysis 3) 2xTP molecules are formed 4) 2 TP molecules are converted into 2 pyruvate molecules via redox reactions where ATP is oxidised and NAD is reduced - 2 ATP net gain - 2 NADH - 4 ATP molecules
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What happens in anaerobic respiration?
Animals - Pyruvate is converted to lactate during redox with NADH - Lactate regenerates NAD which is fed back into glycolysis, meaning ATP is still produced. Plants Pyruvate is converted to ethanal, producing CO2 in the process, then ethanal is converted to ethanol during a redox reaction that converts NADH to NAD.
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What happens during the link reaction?
- Link reaction happens in the mitochondrial matrix - Pyruvate loses carbon as CO2 and is converted to a 2C Acetate via a redox reaction of NAD. - Acetate reacts with coA to form Acetyl coA. - Link reaction would happen twice per glycolysis.
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What happens in the Krebs Cycle?
- Mitochondrial matrix - Acetyl coA reacts with 4C compound to produce 6C citrate - Series of redox reactions produces 2 CO2 molecules, 3 NADH molecules, 1 FADH2 molecules and 1 ATP molecule. - coA is regenerated
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Oxidative phosphorylation
1) H atoms released from NADH and FADH2 2) Hydrogen atoms split into hydrogen ions and electrons. 3) Electrons move down the ETC 4) Energy lost by electrons at each carrier are used to pump hydrogen ions into the intermembrane space via a proton pump creating a favourable concentration gradient for diffusion of hydrogen ions into the matrix via ATP synthase causing it to spin. - Catalysed ADP+Pi -> ATP. - O2 combines with hydrogen ions and electrons to form water.
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Why is oxygen considered the last electron acceptor.
- Oxygen accepts H+ ions and electrons to form water - ETC would stop and no pumping of hydrogen ions, no gradient for the diffusion of hydrogen ions so no ATP molecules produced.
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What is biomass?
- The mass of carbon or dry mass of tissue per given area.
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What is calorimetry
1) Dry the sample, burn the sample 2) Use this to heat a known volume of water 3) Measure temperature change and use this to calculate the chemical energy that was stored in the dry biomass.
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What is the Gross Primary Production
- The chemical energy store in plant biomass, in a given area or volume.
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What is the Net Primary Production
- The chemical energy store in plant biomass after respiratory losses to the environment have been taken into account.
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Formula for NPP
NPP=GPP-R
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What is the energy from the NPP used for?
- Available for plant growth and reproduction. It is also available for other trophic levels in the ecosystem.
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How do we calculate the net production of consumers
N=I - (F+R) N - Net production of consumers I = Chemical energy store F = Energy lost in faeces and urine R = Respiratory losses in the environemtn
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Why is so much energy lost at each trophic level
- In plants, some light energy is reflected or transmitted through loveaves or not of the right wavelength so the efficiency of photosynthesis is very low. - Energy is lost to the surrounding as heat from respiration. - Energy lost in faeces or urine. - Some parts of the organism are not eaten, so some energy is not transferred to the next trophic level.
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Why are food chains often limited to 4-5 trophic levels?
- Energy is lost at each trophic level so the efficiency of energy transfer is very low. - Total biomass is less at higher trophic levels - Insufficient energy available to support a large enough breeding population.
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How does farming maximise energy>
- Simplify food webs by using pesticides so that energy isn't lost. - Reduce respiratory losses within a human food chain such as controlling the conditions livestock are kept in such as restricting their movement or keeping them warm (unethical) . - More biomass so greater chemical energy store so more biomass and a higher chemical energy store so more NPP and efficiency of transfer.
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Primary and Secondary productivity
- The rate of primary and secondary production respectively - kJ per hectare per year
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What is the role of microorganisms in nutrient cycles ?
- Break down organic molecules into simple inorganic molecules and ions, that plants can make use of. - Saprobionts feed by extracellular digestion by secreting digestive enzymes and absorb the soluble nutrients released. - Converts organic into inorganic compounds - DNA, RNA and amino acids into phosphates and nitrates
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What are detritovores?
- Break larger leaves into smaller leaves, increasing the surface area for saprobionts to act upon.
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Stores of nitrogen in plants animals?
- DNA, protein, RNA.
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What happens when plants animals die in the nitrogen cycle?
- Decomposition of DNA, RNA, protein - Produced ammonium ions (ammonification)
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What happens to ammonium ions in the nitrogen cycle?
- Undergo nitrification which involves ammonium ions being converted to nitrite ions and nitrate in aerboic conditions by nitrifying bacteria as these bacteria need oxygen to function.
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What happens to nitrate ions in the nitrogen cycle?
- Taken in by active transport during Assimilation
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What is denitrification?
- Conversion of the nitrate ions into nitrogen gas. - Done by denitrifying bacteria and is done in anaerobic conditions.
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What is nitrogen fixation
- Conversion of nitrogen gas into bacteria.
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Outline the entire nitrogen cycle?
- Animals and plants store nitrogen through DNA, RNA, proteins - When animals die, sacrobionts decompose this into ammonium ions. - Ammonification converts ammonium into nitrite ions and then nitrate ions via nitrification. - Nitrate ions move via active transport during assimilation into root hair cells or are converted into a gas during denitrification. - Nitrogen fixation is the take up of nitrogen gas from the atmosphere.
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During the phosphorus cycle how are inorganic ions introduced into rivers?
- Process of weathering
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How is phosphate recycled?
- Phosphate ions move by seas and rivers and are stored in sedimentary rocks. - Tectonic plate movements pushes phosphate ions into higher regions again. - The phosphate is then recycled again through rivers and seas. - Phopshate ions can enter roots by active transport/assmiliation - Plants can feed on the phosphate ions and incorperate it into its DNA.
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What are micorrhizae?
- Fungi that associate with the roots of plants - They grow in and around the root system, increasing the surface area for absorption of water and mineral ions.
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What are mutualistic relationship?
- Where both species benefit from the interaction. - Micorrhizae recieve sugars from the plant for growing in and around the root.
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Why are fertilisers needed?
- Crops taking in mineral ions from the soil to build their own tissues. - When they are harvested, this means no mineral ions are returned to the soil as the crops don't die and decompose there. - So we need fertilisers to replace lost minerals.
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Natural and Artificial fertilisers
- Organic matter is an example of a natural fertiliser - Artificial fertilisers are pure inorganic ions blended together to give the appropritate balance of mineral ions for a particular crop.
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Why are mineral ions needed?
Nitrate ions (protein synthesis, ATP synthesis, nucleic acids) Phosphate ions (ATP synthesis) Potassium ions (stomatal regulation) Sulphur ions (sulfur containing R-groups)
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What are NPK fertilisers?
- The blending of nitrogen, potassium and phosphate ions.
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What is leaching
-Loss of soluble susbtances from the top layer of the soil when water drains through. - Occurs when fertilisers are applied before rainfall events because there has not been enough time for ions to be taken up by plants and free mineral ions in the soil are washed away.
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What is eutrophication?
- Leaching of excess mineral ions from fertilisers into waterways. - Algal boom is the rapid growth of algae in ponds and rivers which happens after the increase of mineral ions. - Algae grow rapidly and block sunlight from reaching the plants below. - The plants do not photosynthesise so they die. - Bacteria feed on dead remains and decompose it so oxygen levels decrease. - Fish and other organisms die because not enough oxygen is available. - Leads to oxygen depletion so the ecosystem dies out.