Structure of DNA Flashcards

1
Q

linear polymers of nucleotides that function in the storage and expression of genetic information, and its transfer from one generation to the next

A

Nucleic Acid

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2
Q

two types of nucleic acids

A
ribonucleic acid (RNA)
De-oxyribonucleic Acid (DNA)
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3
Q

the three molecular components of nucleotides

A

nitrogenous base
pentose sugar
phosphate

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4
Q

six membered heterocyclic rings of C and N

A

Pyrimidines

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5
Q

fused six membered and five membered heterocyclic rings of C and N

A

purines

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6
Q

N-groups can accept protons, giving “basic” properties to the molecule

A

bases

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7
Q

three characteristics of xanthine and hypoxanthine

A

rarely occur
are removed during DNA repair
are intermediates in nucleotide catabolism

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8
Q

which bases are found in DNA

A

adenine
guanine
thymine
cytosine

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9
Q

which bases are found in RNA

A

adenine
guanine
uracil
cytosine

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10
Q

secondary metabolites of cocoa beans and tea leaves

act as diuretic, cardiac stimulant, and esp vasodilator

A

theobromine and theophylline

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11
Q

stimulant
diuretic
antagonist to adenosine

A

caffeine

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12
Q

nitrogenous bases attached to sugars

A

nucleosides

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13
Q

inhibitory neurotransmitter synthesized in the brain, binds to its respective receptor

A

adenosine

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14
Q

binding of adenosine causes

A

drowsiness

dilation of blood vessels

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15
Q

what competes with adenosine receptor to cause opposite effects

A

caffeine

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16
Q

antibiotic produced from fungus cordyceps militaris

which inhibits the final step of RNA biosynthesis by termination of the ribonucleotide chain

A

cordycepin (3’ deoxy adenosine)

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17
Q

plant hormones derived from adenine
contains adenine ring system with an attached 5-carbon hydrophobic group at free NH2
promote cell division in plants

A

cytokinins

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18
Q

when you have the base, phosphate and sugar all together

A

nucleotide

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19
Q

phosphate acceptor/donor

A

ATP

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20
Q

protein synthesis and signal transduction

A

GTP

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21
Q

Membrane and storage lipid synthesis

A

CTP

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22
Q

carbohydrate synthesis and degradation

23
Q

bond between the 5’ carbon and the oxygen of the first phosphate group in ATP

A

phosphoester bond

24
Q

bonds between the oxygens of the second and third phosphate groups in ATP

A

phosphoanhydride bonds

25
a molecule that ATP is able to borrow phosphate groups from
phosphocreatine
26
the energy difference before and after a process or reaction occurs
delta G | gibbs free energy
27
if delta G is +
input of energy required
28
if delta G -
energy is given off | the reaction is spontaneous
29
a short lived intracellular chemical signal molecule that relays a message from an external "first messenger" which will lead to a cascade of events
secondary messenger
30
common first messengers
hormones and neurotransmitters
31
common secondary messengers
calcium ions inositol-Pi3 diacylglycerol cyclic nucleotides
32
how is cAMP formed
the oxygen on the phosphate group wraps around to bond with the 3' carbon
33
involved in many signal cascades including hormone signaling, apoptosis, disease reactions, neuron function
adenylate cyclase (cAMP)
34
involved in nitric oxide signaling, blood pressure homeostasis, nerve impulse transmission, and stress response in plants
guanylate cyclase (cGMP)
35
enzyme that produces cyclic amp
adenylate cyclase
36
explain the cAMP mediated signal transduction
first messengers bind to receptor activate G protein which changes GDP to GTP activates active adenylate cyclase creates cAMP
37
adenine and thymine form how many hydrogen bonds
2
38
guanine and cytosine form how many hydrogen bonds
3
39
DNA and RNA are always read from ____ to ____
5' to 3'
40
what is the distance for the major groove
3.3 nm
41
how many bases are stacked in a major groove
10
42
each base is how long
0.34 nm
43
what is the most stable form of DNA
B-DNA
44
form when DNA/RNA duplexes form and due to low hydration
A-DNA
45
left handed DNA that can form as a result of torsion during transcription
Z-DNA
46
helps to compact DNA into cell nucleus
supercoiling
47
help with the supercoiling process
histones
48
chromatin is
DNA and histones
49
8 histones with DNA wound to it
neucleosome
50
structure of chromatin when neucleosomes are spread out from each other, is easily manipulated, beads on a string model.
euchromatin
51
neucleosomes and DNA are packed so tightly, no free DNA is available for manipulation
heterochromatin
52
performed experiments with a harmless and deadly bacteria strains on mice to
Griffith
53
proved that only DNA transformed strain R, ie, only isolated DNA from strain S could make strain R harmful, not proteins
Avery, MacLeod, and McCarthy
54
further proved that DNA is the genetic material using viruses
hershey and chase