GENETIC ANALYSIS + GENETIC ENGINEERING CH 8 Flashcards

1
Q

What are some examples of practical applications of modern genetic technologies

A
  • Help solve crimes
  • Determine the cause of genetic illnesses
  • Treat/cure genetic illness
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2
Q

How does heating and cooling affect DNA

A

Heating - strands separate at the hydrogen bonds at temperatures just below boiling

Cooling - complimentary nucleotide bases will regain hydrogen bonds and come together as temperatures lower

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3
Q

Explain how restriction endonucleases works. How can we use this?

A

It is an enzyme inside DNA that cuts at specific palindromic sequences (can be read the same forward and backwards).

This enzyme allows us to cut DNA out of one organism and insert it in another

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4
Q

What is CRISPR;
What does it stand for and how does it work? What is it commonly used for?

A

Clustered Regularly Interspaced Short Palindromic Repeats.

This enzyme recognizes and cuts out foreign DNA (foreign DNA is chosen by what the scientist wants to cut out) + is replaced with a diferent letter.

Commonly used to treat monogenic disorders like sickle cell anemia

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5
Q

Describe the process in how gel electrophoresis is used to analyze DNA

A

1 - Restriction Endonucleases cuts DNA at specific sites (everyone has different lenghs between different sites)

2 - The DNA is negatively charged and insterted as it runs down to the bottom, positve end of the gel

3 - Bigger pieces of DNA take longer to run because they get stuck in the gel

4 - The DNA is separated by size and is compared to the known ladder

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6
Q

What determines the size of DNA fragments

A

The number of base pairs (bp) they contain

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7
Q

What is PCR;
What does it stand for? How does it work? What is it commonly used for? What is a disadvantage of this technique?

A

Polymerase Chain Reaction

  • DENATURATION: Raise the temp to denature and separate strands of DNA
  • ANNEALING: Lowering heat to add RNA primers
  • ELONGATION: Uses a modified, thermophilic DNA polymerase called TAQ Polymerase that synthesizes the new strand.

This is done to create large amounts of DNA in a short period of time. This allows us to detect cancer from a single cell or diagnose an infection from a single gene copy

Works best on DNA so we have to use revere transcriptase to use it on RNA (now DNA)

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8
Q

What is real time PCR and why is it important?

A

It requires much less time and allows researchers to detect products DURING the reaction instead of AFTER

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9
Q

What are some common applications of PCR (identify four)

A
  • Gene Mapping
  • Study of Genetic Defects or Cancer
  • Forensics
  • Diagnosis of Infectious Disease
  • Taxonomy Studies
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10
Q

How is recombinant DNA created? And how does purification play a role in this process?

A

Restriction endonuclease cuts and removes dna of interest from a human cell

The same restriction endonuclease cuts plasmid dna open and the sticky ends of both DNA are stuck together.

This is insterted back into the bacterial cell.
The cell will take DNA to form and mRNA to form protein. This protein can be purified and also removes other bacterial stuff out

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11
Q

T/F: PCR uses specialized DNA Polymerase adapted to high temperatures

A

TRUE; it is called TAQ Polymerase

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12
Q

What is the name of the enzyme that cuts DNA into smaller pieces

A

Restriction Endonucleases

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12
Q

Why is recombinant DNA technology important?

A

We use DNA recombination to create natural gene products by synthesizing proteins to help treat things like arthritis, cancer, or diabetes

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13
Q

Provide two examples of recombinant products that have contributed to human health

A

Tumor Necrosis Factor (TNF) - is a protein that is produced or supplemented when the cell grows too fast; this kills the cell and protects our body from possible tumors

We can give this to cancer patients and stimulates the process of killing tumors

Remicade and Humira work by blocking TNF to treat autoimmune disorders like rheumatoid arthritis through stopping inflammation

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14
Q

T/F: Recombinant DNA technology is a GMO process

A

True; we are altering and modifying genes to create better byproducts for humans. We are not using it for unethical reasons

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15
Q

What is cystic fibrosis?

A

A mutation of a single codon and a lack of a protein that leads to the buildup of mucus in the lungs

16
Q

Describe gene therapy (not the process, but rather why it is done)

A

The repair or correction of a FAULTY gene in humans suffering from fatal or harmful disease

Must be altering faulty genes to be considered ethical

17
Q

Describe somatic gene therapy process/procedure

A
  • We modify a retrovirus with beneficial genes
  • We isolate human bone marrow cells and the virus works by inserts its beneficial DNA into cell genome
  • Transfected cells are reinfused into patient and they are then observed for the expression of normal genes
18
Q

Somatic vs Germline Gene Therapy

A

Somatic - Cure one person but is not transferred to offspring (cutting gene out and using GMO retrovirus to modify the gene and instert back into patient to exhibit traits)

Germline - Genes are inserted into an egg, sperm or embryo so that they are present in ALL of their cells and can be passed to offspring

19
Q

What is the name of the virus used in gene therapy

A

Retrovirus

20
Q

T/F: Naked DNA is often used in gene therapy

A

False

21
Q

Which type of gene therapy involves an egg, sperm, or embryo

A

Germline Gene Therapy

22
Q

What are the steps in the process of DNA sequencing; What is the name of this specific type of sequencing process

A

HIGH-THROUGHPUT GENOME SEQUENCING
- Obtain and isolate DNA to cut and add adaptors and run it through PCR
- The computer takes fragements and lines them in order to piece together the genome

23
Q

What are SNP’s

A

Single Nucleotide Polymorphisms
- A ONE LETTER differences that makes us different from other people

24
Q

How does 23andMe work?

A

Observing our SNP’s (the one letter differences in our genome that make us different from other people) and comparing it to generations of people who share similar SNPs

25
Q

SNPs are derived from:

A

Many single nucleotide changes

26
Q

What is a specific segment of DNA that codes for protein, RNA or regulates the production of these products

A

GENE

27
Q

The codon for alanine is GCA, what is the anticodon

A

CGU

28
Q

______ genomes provide a complete understanding of cell function, disease development, and other issues

A

Annotated

29
Q

What is the specific name for the genome sequencing process discussed in lecture?

A

High-Throughput Genome Sequencing

30
Q

T/F: SNPs are always terrible and result in bad mutations

A

False; they are the individual changes that make us unique