BGM1002/L19 Translation II Flashcards

1
Q

What are ribosomes made of?

A

Ribonucleoprotein (RNA-protein)

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2
Q

How abundant are ribosomes?

A

10% of total protein
80% RNA

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3
Q

Describe the composition of 70S ribosomes.

A

50S + 30S subunits

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4
Q

What does the ā€˜Sā€™ in 70S stand for?

A

Svedberg unit
Measure sedimentation rate in a centrifuge thus size and shape

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5
Q

Describe the structure of the 50S ribosomal subunit.

A

31 different L proteins
23S rRNA
5S rRNA

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6
Q

Describe the structure of the 30S ribosomal subunit.

A

21 S proteins
16S rRNA

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7
Q

What is required for translation initiation?

A

Initiation factors IF1, IF2, IF3 and GTP
Initiator tRNA: fMet-tRNA^fMet

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8
Q

What is required for translation elongation?

A

Elongation factors EF-Tu, EF-Ts, EF-G and GTP

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9
Q

What is required for translation termination? (2)

A

Stop codon
Release factors RF1 and RF2

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10
Q

What is the name of initiator tRNA in bacteria?

A

N-formylmethionine (fMet)

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11
Q

What happens to methionine once it is removed from the initiator tRNA?

A

Formyl group transferred to methionine by formyltransferase

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12
Q

Which part of the ribosome binds to Shine Dalgarno sequence/ribosome binding site to initiate translation?

A

30S subunit

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13
Q

Where does initiator tRNA bind to initiate transcription?

A

Start codon AUG

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14
Q

Name the 3 sites of the ribosome involved in initiation of translation.

A

A site: amino acyl site
P site: peptidyl site
E site: exit site

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15
Q

What binds to form the 70S ribosomal complex?

A

50S and 30S ribosomal subunits

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16
Q

How is the 30S ribosomal subunit positioned on the 16S rRNA?

A

Base pairing between Shine Dalgarno sequence and 16S rRNA

17
Q

Where do IF1 and IF3 bind?

A

30S subunit

18
Q

Where does IF2 bind?

A

Complex with GTP

19
Q

How is IF3 released from 30S ribosomal subunit?

A

Charged initiator tRNA binds to mRNA

20
Q

What displaces IF1 and IF2 during initiation? What is produced?

A

50S ribosomal subunit
GDP + Pi

21
Q

Describe the process of translation elongation. (3)

A

Aminoacyl tRNA binds to A site
Peptide bond formation
Translocation

22
Q

What is required for delivery of charged tRNA to the A site?

A

EF-Tu, EF-Ts + GTP

23
Q

What is required for translocation of RNA through ribosomes?

A

EF-G + GTP

24
Q

What occurs when GTP is hydrolysed in the presence of EF-Tu?

A

EF-Tu-GDP complex forms

25
Q

How is the EF-Tu-GDP complex broken down?

A

EF-Ts exchanges GDP for GTP

26
Q

Describe peptide bond formation in translation. (2)

A

Amino group of aminoacyl-tRNA attacks carbonyl group of ester linkage of peptidyl-tRNA
Deacylated tRNA released

27
Q

What sequences does RF1 recognise?

A

UAA and UAG

28
Q

What sequences does RF2 recognise?

A

UAA and UGA

29
Q

What does RF3.GTP do?

A

Helps RF1 and RF2 conduct termination

30
Q

What is the role of RRF and EF-G?

A

Promote dissociation of ribosome

31
Q

How is the energy for termination provided?

A

GTP hydrolysis