dna replication - exam 1 Flashcards

1
Q

nucleotide

A

phostphate gtoup, pentose sugar, nitrogenous base

5 nitrogenous bases – ACTUG
what the nucleotide is named after

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2
Q

deoxyribonucleic acid

A

dna

contains instructions used in development & functioning of all living organisms

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3
Q

ribonucleic acid

A

crucial for tkaing instructions in dna & making proteins that wn the cell

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4
Q

dna bases

A

ATGC

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5
Q

rna bases

A

AUGC

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6
Q

dna sugar

A

deoxyribose

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7
Q

rna sugar

A

ribose

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8
Q

dna # of strands

A

2, double helix

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9
Q

rna # of strands

A

1

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10
Q

dna location in cell

A

nucleus

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11
Q

rna location in cell

A

nucleus, cytosol

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12
Q

ATGGCTA

A

TACCGAT

dna

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13
Q

ACUGCA

A

UGACGU

rna

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14
Q

hydrogen bonds

A

2 bonds in TA
3 bonds in GC

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15
Q

genome

A

complete set of dna in an orgnaism

every cell in the body contains a complete set of the genome

contains all of the info needed for an organsim to develop & grow

no correlation between size of genome & complexity of organism

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16
Q

helicase

A

unwinds double helix at replication fork

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17
Q

single stranded binding protein

A

stabilize replication bubble

keep single strands from re pairing

18
Q

topoisomerase

A

relieves supercoiling ahead of helicase

allows helicase to keep moving

19
Q

dna polymerase III

A

makes dna strand complementary to template

but dna needs a 3’-OH to get started so it needs a primase

20
Q

primase

A

makes a primer

now dna pol III can make dna complementary to template strand

the compl. strand is built in 5’ –> 3’ direction

dna can only build by adding nucleotides to 3’ end

21
Q

primer

A

short strand of rna complementary to template

provides 3’-OH for dna pol III

22
Q

dna polymerase I

A

removes primers

fills in gap w/ dna nucleotides

it cannot make the phosphdiester bond to connect dna fragments

23
Q

dna ligase

A

makes phosphodiester bond to connect dna fragments

24
Q

continous synthesis

A

leading strand

moving towards inside of fork

25
Q

discontinous synthesis

A

lagging strand

moving towards open end of fork

has to keep making small strand as the fork opens up

26
Q

why can’t dna syntehsis occur after primer is removed

A

no 3’ - OH available

27
Q

what happens because the primer is removed

A

gap doesn’t get filled

cell hates single stranded dna

single stranded ends get chopped off

the chromosome gets shorter

28
Q

telomeres

A

ends of chromosomes

stretches of repeated bases

do not contain genes

29
Q

what happens when telomere repeats are gone

A

start losing genes

chromosomes fall apart (shoelace w/out aglet)

chromosomes fuse

cells die

30
Q

hayflick limit

A

40-60 divisions before cell death

more than this & the cells start to mutate, can become harmful

31
Q

telomerase

A

enzymes that can “fill in the gap” in cells that need to replicate over the hayflick limit
- embryo & stem cells

chromosomes maintain length upon each cell divsion

32
Q

telomere & aging

A

telomere length correlates with age
longer telomere = longer life span

telomeres shorten w age

33
Q

too much telomerase

A

overexpression of telomerase

expands lifespan

compromises fertility

did not lead to longer telomeres

mutations = cancer

34
Q

3’ –> 5’ exonuclease activity

A

pol. adds incorrecct nt

pol. detects mispaired bases

uses 3’-5’ exonuclease to remove incorrect nt

35
Q

nuclease

A

chops up nucleic acid

36
Q

exonuclease

A

chops up nucleic acid starting at an end

37
Q

3’-5’ exonuclease

A

chops up from 3’ end

38
Q

mismatch repair system

A

remove/replace incorrectly pair nts, later

mismatch detacted

endonuclease cuts out mismatch

dna pol. fills in the correct nts

dna ligase makes the last phophodiester bond

39
Q

endonuclease

A

chops up internal mistakes

40
Q

excision repair system

A

similar to mismatch but works later

uv light can cause thymine dimer to become misshapen

endonuclease cuts out the damage

dna pol fills in the gap

ligase connects pieces