PROKARYOTIC GENE EXPRESSION Flashcards

(54 cards)

1
Q

which genes encode protein invoved in metabolism, biosynthesis or cell structure

A

Structural genes

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2
Q

which genes encode products that interact with other DNA sequences and affect the transcription and translation of these sequences

A

Regulatory genes

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3
Q

DNA sequence that are not transcribed but play a role in regulating sequences to whcih they are physically linked are called

A

Regulatory element

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4
Q

which elements are continuously expressed under normal cellular conditions

A

Constitutive expression

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5
Q

which elements stimulate gene expression

A

positive regulation

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6
Q

which element inhibits gene expression

A

negative regulation

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7
Q

gene expression can be controlled in single or multiple levels

A

multiple levels

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8
Q

what are responsible for binding to DNA by forming hydrogen bonds with DNA

A

DNA binding domains

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9
Q

a short sequence/ structure within the DNA binding domain, that fits into the major groove of DNA is called

A

Motifs

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10
Q

motifs are found on which groove of the DNA

A

major groove

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11
Q

where are helix-turn-helix located

A

bacterial regulatory protein; related motifs in eukaryotic protein

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12
Q

where are zinc finger location

A

eukaryotic regulatory and other proteins

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13
Q

where are steroid receptor located

A

eukaryotic proteins

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14
Q

where would u find leucine zipper motif

A

in eukaryotic transcription factors

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15
Q

where would you find helix-loop-helix

A

eukaryotic proteins

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16
Q

what kind of proteins would u find

A

homeodomain

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17
Q

what control transcription in bacterial cells

A

operons

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18
Q

what are the lac mutations

A

structural gene mutations
regulatory gene mutations
operator mutations
promoter mutations

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19
Q

what does an operon include

A

promoter+ operator+ structural genes

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20
Q

what type of operons is that in which transcription is usually turn off and needs to be turned on

A

inducible operons

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21
Q

what type of operons is that in which transcription is normally on and needs to be turned off

A

repressible operons

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22
Q

small molecule That turns on transcirption is called

23
Q

What is the effect of negative inducible operons

A

it inhibits transcription because molecule binds to operator

24
Q

what is the small molecule that binds to the repressor and makes it capable of binding to the operator to turn off transcription

25
what is the protein that binds to the promoter and thereby increases the efficiency of RNAP binding
Catabolite activator protein (CAP)
26
what is the regulatory protein involved that stimulates transcription by binding to DNA
activator
27
Jacob and Monod deduced that operons interfered with the normal regulation in which organism
E.coli
28
structural genes examples
lacZ, lacY, lacA (ZYA)
29
which encodes B-galactosidase
lac Z
30
which encodes lactose permease
lacY
31
which encodes thiogalactoside transacetylase
lacA
32
what are regulatory genes and sequences
lacI, lacP, lacO (IPO)
33
which encodes lac repressor
lacI
34
does the repression of the lac operon completely shit down transcription
Never Completely
35
Beta-galactosidase converts lactose to
allolactose
36
allolactose converts to
galactose and glucose
37
When lactose is absent from the growth medium, what molecules are produced
B-galactosidase, permease, transacetylase
38
When lactose is added to the medium and glucose is absent, what happens
the rate of synthesis of each enzyme increases about a thousandfold in 2-3 minutes!
39
increase in protein synthesis is driven by
transcription of the lac operon.
40
In the absence of lactose, what happens
the regulator protein (a repressor) binds to the operator and inhibits transcription.
41
which repression favors using glucose when available and repressing the metabolism of other sugars.
Catabolite repression
42
In E. coli, the concentration of cAMP is related to
inversely proportional to the level of available glucose.
43
what is an example of a negative repressible operon
the trp Operon
44
five structural genes in the trp operon
trpE, trpD, trpC, trpB, and trpA
45
the trp operon gene converts
chorismate to tryptophan
46
what affects the continuation of transcription, not its initiation.
Attenuation
47
what is the secondary structure that forms in the 5’ UTR of certain operons that causes the premature termination of transcription.
Attenuator
48
what is the protein or DNA sequence that inhibits the termination of transcription.
Antiterminator
49
what contain binding sites for transcriptional regulators but lie at distance from the gene
Bacterial enhancers
50
what sequence is complementary to targeted partial sequence of mRNA
Antisense RNA
51
what molecules influence the formation of secondary structures in mRNA
Riboswitches
52
what RNA molecules with catalytic activity
Ribozymes
53
when extracellular osmolarity is low,
the ompF mRNA is translated to produce OmpF protein
54
when extracellular osmolarity is high
blocking the ribosome-binidng site and synthesis of the OmpF protein is reduced.