Intro to Genetics Flashcards

1
Q

what is FAP

A

familial adenomas polyposis - autosomal dominant inherited condition
numerous polyps form in the epithelium of the large intestine - start benign but can lead to colon cancer

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2
Q

what ways can you diagnose a genetic disorder

A

family trees, physical exams, non-genetic and genetic tests

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3
Q

what types of non-genetic tests are there and what can they identify

A

blood tests - enzyme assays, inborn errors of metabolism
haematology - thalassaemia
x rays - skeletal dysplasia, achondroplasia

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4
Q

what types of genetics tests are there

A

genomic architecture - cytogenetics, array-based techniques

gene faults - sequencing, OLA assays, MLPA tests

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5
Q

in genome anatomy how many nucleotides is 750 megabytes of uncompressed data

A

3x10 ^9

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6
Q

what is DNA stable and RNA unstable

A

because of the OH on 2’ carbon which attacks the phosphodiester bond between RNA molecules causing the RNA to fall apart

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7
Q

what is a karyotype

A

combination of chromosomes in a cell

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8
Q

describe the anatomy of a chromosome

A

two arms - attach at mitotic spindle (p - short, q - long)
telomeres - on each arm - labelled ptel and qtel
q banding splits the arms into further division eg 7q5 which allows chromosomes to be coordinated as they are linear

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9
Q

what is the role of telomerase

which cells is it active and inactive in

A

TERT - replaces telomere lost in replication - inactive in somatic cells ie a finite number of divisions
active in cancer cells

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10
Q

what is our DNA content

A

n = 23
2n = 46
3x10^9 from paternal and maternal so 6x10^9 in total

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11
Q

why do we need two alleles

A

haploinsufficency occurs if single copy of allele at the locus so can’t produce standard phenotype

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12
Q

which chromosome do we only need one

A

X chromosome - the other is inactivated

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13
Q

what are pseudoautosomal regions

A

homologous (shared/same) regions between X and Y

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14
Q

what is the SRY gene

A

in males, present on the Y gene which leads to development of testes and determination of male traits

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15
Q

what percentage of the genome is non-coding

A

more than 90%

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16
Q

how many protein coding genes are there

A

20,000

17
Q

what is the genome made up of

A

genes, repetitive sequences and satellite DNA

18
Q

what are genes made out of

A

UTR’s, introns and exons

19
Q

what is the result of alternative splicing

A

removes different introns so different proteins can be coded from the same gene

20
Q

where are UTRs located and what are they replaced by in transcription

A

within the coding region and replaced by cap and polyA tail

21
Q

what is the definition of gene families

A

structurally related genes which have differentiated over time due to divergence and duplication

22
Q

what is pseudogene

A

genes that no longer work

23
Q

what is a processed gene

A

intronless copies of genes which are caused by reverse transcription and reintegration (eg HIV) - most of the time non-functional

24
Q

what are two examples of repetitive sequences

A

satellite DNA

interspaced repeats

25
Q

what is satellite DNA

give an example

A

large blocks of repetitive DNA mainly near centromeres
alphoid DNA - 171 repeat - they allows identification of chromosome
required for assembly of centromere

26
Q

what are interspaced repeats and give an example

A

scattered around the genome
eg Alu repeat (a SINE) - short interspaced nuclear element (300 bp) which makes up 5% of the genome
it has a role in molecular pathology

27
Q

what is mitochondria derived from

A

evolutionary remnants of endosymbiotic bacteria

28
Q

describe the structure of mitochondrial genome

A

circular genome which is reduced over time
16,569 bp
37 genes
cytoplasmic inheritance through oocyte

29
Q

what is a nucleosome

A

around 200 bp of DNA wrapped around a histone protein