Lecture 13 Flashcards

(44 cards)

1
Q

How do dendritic cells produce different signals to dictate naive CD4 T cell fates?

A

sense the type of pathogen through PRRs, respond by secreting specific cytokines

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

How is Th1 differentiation driven?

A

intracellular pathogens sensed by TLR3/TLR7/TLR9 (viral RNA/DNA), secretes IL-12 –> Th1 differentiation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

How is Th2 differentiation driven?

A

helminths or allergen components recognized by TLR2/TLR6, C-type lectin receptors to detect helminth glycans, produces IL-4 –> Th2 differentiation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

How is Th17 differentiation driven?

A

extracellular pathogens sensed by TLR4, Dectin-1 for fungal β-glucans, secretes TGF-β + IL-6 –> Th17 differentiation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Does CD8 need signal 3 to become cytotoxic?

A

primarily activated in response to intracellular such as virus and some intracellular bacteria –> IL-12 (and IFN-α/β) key Signal 3 cytokine that drives CD8+ T cell differentiation into cytotoxic T lymphocytes (CTLs)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Why is the humoral immune response critical?

A

many pathogens multiply/spread in extracellular fluid, antibodies produced by B cells act to destroy extracellular pathogens/products and prevent spread of infection

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

How do B cells get activated by antigen without T cell’s help?

A

Signal 1: non-protein antigens (highly repetitive epitopes like bacterial polysaccharides or LPS)
Signal 2: activate via TLRs, recognizing LPS via TLR4 or bacterial DNA via TLR9
results in: rapid IgM production, early protection against extracellular bacteria

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

How do B cells get activated by antigen with T cell’s help?

A

Signal 1 (BCR binding): B cell recognizes a protein antigen, internalizes it, degraded and presented on MHC II
Signal 2 (helper T cell): TFH (follicular helper) can enter B cell follicular, TCR binds to peptide-MHCII presented by B cells, T cells provide help by CD40-CD40L binding, cytokine IL-21 enhances proliferation/differentiation
–> activate NF-kb pathways, AP-1, NFAT. B cell proliferation to generate plasmablasts

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

How does linked epitope recognition work?

A

B cell recognizes antigen through BCR, binds to specific part of antigen –> internalizes/processes whole antigen, presents to MHC II –> Tfh helps B if TCR recognizes processed peptide on MHCII

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

How do we increase probability of B cell and TFH recognizing different epitopes from the same antigen?

A

spatial organization of lymph nodes helps T/B cells meet
DCs act as common source of antigen
antigen persistence & repeated encounters
clonal expansion of both T/B

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What do subcapsular sinus macrophages do?

A

poorly endocytic, opsonized antigen binds to CR1 and CR2 on surface, antigen is retained where it can be presented to follicular B cells –> follicular DCs –> repeated B engagement –> long-term reservoir of antigen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What are the chemokines that drive migration of B cells and activated T cells?

A

CCR7
CXCR5

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What do SLAM family receptors do? What are they?

A

SLAM, Ly108, CD84
found on both T/B, enable homotypic adhesions
strengthen TCR signaling, enhancing cytokine production (and therefore B cell activation)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is SAP?

A

SLAM-associated protein, signaling adaptor required for stable SLAM-SLAM interactions

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

How does SAP expression change over time in T cells?

A

initially low to prevent prolonged T-B adhesion, as Tfh fully differentiate, Bcl-6 upregulated –> increases SAP, allowing sustained interactions, effective delivery of CD40L and cytokine signals to B

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What are fates of proliferating B cells?

A

2-3 days: downregulate CCR7 while maintaining EBl2 –> directs away from boundary, back to interfollicular region
differentiate into antibody-secreting plasmablasts in primary focus

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What is the primary focus?

A

site in medullary cords where early antibody production occurs before germinal center reaction and plasma cell differentiation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What is the phenotype of plasmablasts?

A

secrete antibody, retain substantial surface Ig and MHCII, can continue to take up/present antigen to T

19
Q

What is the phenotype of plasma cells?

A

low levels of surface Ig, can express MHCII and may suppress Tfh in negative feedback pathway while differentiating
may survive for days/weeks (or longer - persistence)

20
Q

What is the germinal center?

A

sites of intense B cell proliferation and differentiation in lymphoid follicle during adaptive immune response to increase antibody affinity and function

21
Q

What does somatic hypermutation do?

A

introduces mutations that change one or a few amino acids in V region, producing a B-cell clone that improves the affinity for antigen

22
Q

What is class switching?

A

heavy chain region of another isotype is replaced, modifying effector activity of antibody but not its antigen specificity

23
Q

Where does somatic hypermutation occur?

A

dark zone of the germinal center (GC)

24
Q

What is the negative fate of somatic hypermutation?

A

prevent correct Ig folding, loss of functional BCR, B cells have low/no affinity and die

25
What is the positive fate of somatic hypermutation?
mutations increase BCR affinity for antigen --> stronger selection and survival --> capture antigen on follicular dendritic cells (FDCs) and process/present on MHCII
26
How does high-affinity mutant selection in the germinal center occur?
B cells that capture and present linked antigen epitopes to Tfh cells receive help through CD40L/IL-21, which promote survival and proliferation
27
How does BCR affinity maturation work?
B cells who got help from Tfh will re-express CXCR4, return to dark zone, undergo more cycles of somatic hypermutation & proliferation
28
What is the final differentiation after a B cell reaches optimal affinity?
exits germinal center, becomes: long-lived plasma cell secreting high-affinity antibodies OR memory B cells, ready to respond faster upon re-exposure
29
What is the role of follicular dendritic cells (FDCs) in the germinal center?
store antigen for competitive selection, B cells with higher affinity will have a higher chance of binding antigen and getting survival signals
30
What enzyme drives antibody diversity?
activation-induced cytidine deaminase (AID) which introduces mutations and DNA breaks in Ig genes
31
How does AID work in somatic hypermutation (SHM)
AID converts cytidine (C) to uridine (U) in Ig variable region
32
What are switch regions?
repetitive DNA sequences located upstream of all C genes except Cδ
33
How is the switch region prepared for recombination?
RNAp stalls in S, creating ssDNA target for AID --> DNA repair rejoins different C regions to V region
34
What is the ds break repair machinery? How does it create expression of a new isotype?
DNA-PKcs, Ku70/80, Ligase IV aligns, joins two S regions intervening DNA excised, degraded
35
How do cytokines impact class switch recombination?
Tfh cells secrete cytokines that promote transcription at specific S promoters upstream of the C genes
36
What isotypes are associated with IL-4? (class switch recombination)
IgG1, IgE
37
What isotypes are associated with IFN-γ? (class switch recombination)
IgG3, IgG2a
38
What isotypes are associated with TGF-β? (class switch recombination)
IgG2b, IgA
39
What isotypes are associated with IL-21? (class switch recombination)
IgG3, IgG1, IgA
40
What isotypes are associated with IL-5? (class switch recombination)
IgG1, IgA
41
How does T cell independent B cell activation vary at different concentrations?
polyreactive at high concentration, specific at low concentration
42
What happens in BCR cross-linking?
antigens bind and extensively cross-link many BCRs, which can lead to an IgM response on its own
43
What is BAFF? What cell produces it?
TNF-family cytokine produced by DCs, promotes B cell survival and class switching
44
What is the limitation of thymus-independent antigen responses?
limited class switching, memory B cells not induced