Lecture 24 Flashcards
Human Microbiome I (25 cards)
microbiome
community of microorganisms that inhabit a particular environment
how is the human microbiome acquired
horrizontally from the enviro. can vary a lot over time
why fiber intake is important (vegetables)
microbes metabolize mucus when they dont get enough
dietary fiber
derived from plants - indigestible by humans without help from microbes in the gut
where is fiber primarily metabolized
large intestine (fermented)
waste products of fiber metabolism and benefit
SCFA
- food for epithelial cells
- promote healthy immune system development
succession
natural, gradual change in structural composition
how is gut microbiome established ?
succession across lifetime
effect of birth on gut microbiome
vaginal delivery makes for a greater initial variety of microbes than cesarean section
vaginal microbiome
acidic from glycogen excretion and fermentation by microbes
gut microbiome
neutral pH
stomach microbiome
acidic, pH ~2 (stomach acid HCl)
‘poo milkshake’
faecal biome transplants for c-section babies
human milk oligosaccharides
indigestible to infants (lack enzymes) - pass through LI intact
3rd most abundant component of human milk
b. infantis
‘champion colonizer’ of human guts
supportive of healthy gut
contains all essential enzymes
- sometimes lack of it in c-section babies
how do hmos protect infants from pathogens
they bind pathogens and block epithelial cells
ecological disturbance
resets community
harms of “antimicrobial armory”
can be an indiscriminate killer - kill beneficial microbes
specifically broad-spectrum microbes … can decimate healthy gut microbial community
c. diff infection likely …
after antibiotic treatment - “opportunistic niche” - thrives after disturbance
narrow-spectrum antibiotic
target specific bacterial groups
(not indiscriminate killers - less disruptive)
pre-biotic
promotes growth of healthy gut bacteria
fmt
fecal microbiota transplant
pro-biotics
contain live microbes (the pills are freeze-dried bacteria)
H. pylori
pathogenic bacteria that proved stomach is not sterile
someone drank it to prove point
it swims out of acid to microenviro next to epithelial cells (gastric glands) and colonizes