PathoLecoDeco Flashcards
(1603 cards)
Microbiology - HAI
Rates of HAI in industrialised countries?
3.5-10% of all patients
Microbiology - HAI
Which systems are affected by HAIs most often?
GI
UTI
Microbiology - HAI
List human skin associated bacteria?
Corynebacterium, Staphylococcus and Streptococcus
Microbiology - HAI
Gram positive spore forming anaerobe
Spores transmissible, contaminate environment, persist for long periods
Ingested spores germinate in gut
Gut flora disturbed by abx exposure, to different extents
What bacteria?
C.Dif
Microbiology - HAI
Gram negative rod
Commonest Gram neg bacteraemia and rising nationally
What bacteria?
E.coli
Microbiology - HAI
What does CPE stand for?
Carbapenemase-producing Enterobacteriaceae
Some Klebsiella pneumonia are CPE
Microbiology - PUO
Knockaert 2003 definition of PUO?
3 days of Hospital investigation with no diagnosis
Microbiology - PUO
Durack and Street criteria categories (4) of PUO?
Classic
Nosocomial
Immune-deficient
HIV associated
Microbiology - PUO
Routine tests for PUO
FBC U&E Total protein LFTs CRP CXR Blood cultures x3 Urine culture HIV test
Extra tests CK ANA ANCA RhF Ferritin Abdominal imaging USS / CT CMV EBV serology Stool cultures + OCP
Extended serology tests Q-Fever, Bartonella, Brucella etc. RIPL If returned traveler Echocardiogram CT imaging / PET scan Biopsies LP Bone marrow
Microbiology - PUO
Viral causes PUO?
Viral
CMV / EBV
HIV
Hepatitis A,B,C,D,E
Microbiology - PUO
Parasitic causes PUO
Malaria Amoebic liver abcess Schistosomiasis Toxoplasmosis Trypanosomiasis
Microbiology - PUO
Fungal causes PUO
Cryptococcosis
Histoplasmosis
Microbiology - PUO
Bacterial causes PUO
Mycobacteria TB NTM Enteric fevers Salmonella typhi Zoonoses
Microbiology - PUO
EBV serology timeline:
VCAIgM/IgG @ infection
EBNA1 - post infection (3weeks+) for rest of life
EBVDNA - rapidly cleared unless immunodeficient
Heterophile - not specific / poor sensitivity
Microbiology - PUO
PET CT uses for PUO?
FDG - increased glycolysis
- Useful in endocarditis / vascular infections/inflammation
CAUTION WITH POOR GLUCOSE CONTROL - pt must fast
Microbiology - PUO
55y/o – T2DM, Osteoarthritis, COPD
Lives in the UK but visited family in Jordan 3 months ago, lived on their farm, felt well while there
Fevers for last 3 weeks with night sweats, no weight loss no respiratory symptoms
Back pain slightly worse than normal
Embarrassed so didn’t tell clerking doctors about a swollen left testicle.
Bloods reveal a high CRP and a Leukocytosis
Brucellosis
Microbiology - PUO
Dukes criteria for endocarditis?
2 major or 1 major + 3 minor criteria Major Persistent bacteraemia (>2 BC pos) Echocardiogram: vegetation Positive serology for Bartonella, Coxiella or Brucella Minor Predisposition (murmur, IVDU) Inflammatory markers (fever , CRP high) Immune complexes: splinters, RBCs in urine Embolic phenomena: Janeway lesions, CVA Atypical echo 1 positive BC
Microbiology - PUO
GCA epidemiology + clinical features?
Age >50 Headache Not needed for diagnosis – but should raise suspicion Jaw claudication ESR > 45 need to adjust for age Not raised in 7-20% in case series CRP adds sensitivity 50% will have change if vision on presentation Often minor / fluctuating High risk of sight impairment / stroke Temporal biopsy gold standard PET useful Treat immediately – involve rheumatologist!
Microbiology - PUO
Salmon pink rash, Ferritin high, Temperature > 39ºC (102.2ºF) for >1 wk
Leukocytosis >10,000/mm3 ( 80% granulocytes)
Typical Rash
Arthalgias > 2wks
Sore throat
Lymphadenopathy and/or
Splenomegaly or hepatomegaly
Abnormal liver function studies, particularly elevations in AST ALT LDH
Negative tests for ANA and rheumatoid factor
Adult onset Stills
Microbiology - PUO
Malignant causes of PUO?
Lymphoma – especially non-Hodgkin’s
Often advanced disease with aggressive subtype
Raised LDH, weight loss, HSM, lymph nodes
Leukaemia
Bone marrow biopsy
Renal Cell Carcinoma
20% of cases present with fever, haematuria can occur
Hepatocellular carcinoma or other tumours metastatic to the liver
Microbiology - PUO
List 5 miscellaneous causes of PUO?
Addison Dressler PE Drug fever Habitual hyperthermia Subacute thyroiditis
Microbiology - Zoonoses
What percentage of emerging human infectious diseases come from animals?
> 70%
Eg:
VHF
respiratory diseases; MERS
novel influenza viruses; pH1N1
Microbiology - Zoonoses
Campylobacter
- Reservoir
- Transmission
- Poultry + Cattle + untreated water
- Contaminated food
80% from chicken in UK
Microbiology - Zoonoses
Campylobacter Sx, Ix, Rx
Diarrhoea
Bloating
Cramps
Stool culture
Supportive