BIOCHEM Flashcards

1
Q

Glycolysis Rate Limiting Enzyme

A

PFK 1

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2
Q

Glycogenesis Rate Limiting Enzyme

A

Glycogensynthase

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3
Q

Glycogenolysis Rate Limiting Enzyme

A

Glycogen Phosphorylase

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4
Q

Gluconeogenesis Rate Limiting Enzyme

A

Fructose 1-6 bisphosphate

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5
Q

PPP Rate Limiting Enzyme

A

Glucose 6 phosphate dehydrogenase

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6
Q

Citric Acid Cycle- Krebs- TCA Cycle Location & Main Function

A

Mito matrix. Purpose: Oxidation of acetyl CoA to CO2 and water. Produces NADH and FADH2.
* Doesnt require O2 but wont occur anaerobically because NADH and FADH2 will inhibit

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7
Q

Acetyl Co-A

A

Contains High energy thioester bond used to drive other rxns upon hydrolysis

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8
Q

Pyruvate dehydrogenase complex location and enzymes

A

Mitochondrial Matrix
1- Conversion of pyruvate to acetyl coA ( pyruvate dehydrogenase, dihydropropyl transacetylase, dihydrolipoyl dehydrogenase)
2 Regualtion of PDH ( pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase)

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9
Q

In the PDH complex, PDH oxidizes ___ to create CO2. it Requires ___ and ____

A

Pyruvate TPP and Mg2+

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10
Q

In the PDH complex, dihydropropyl transacetylase oxidizes ____ using lipoic acid. It transfers the resulting acetyl group to coA

A

remaining two c molecule

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11
Q

In the PDH complex, dihydrolipoyl dehydrogenase uses ____ to reoxidize lipoic acid forming ______ which can later transfer e- to NAD+ , forming NADH that can go into ETC

A

FAD, FAD2

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12
Q

PDH complex:

PDH kinase phosphorylates PDH when ___ and ___ are high to turn it off.

A

ATP or Acetyl CoA

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13
Q

PDH complex:

PDH phosphatase dephosphorylates PDH when ____ is high to turn it on

A

ADP

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14
Q

5 Ways Acetyl CoA can be produced

A
Glycolysis- PDH complex
Fatty acid oxidation (beta oxidation)
Amino Acid Catabolism
Ketones
Alcohol
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15
Q

Glycolysis:

Glucose —-> Glucose 6 Phosphate

A

Enzyme: Hexokinase ( in peripheral tissue) Glucokinase (in liver, insulin responsive). ATP consumed. Mg2 cofactor, Irreversible (traps glucose in the cell)

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16
Q

Glycolysis:

Glucose 6P—-> Fructose 6-P

17
Q

Glycolysis:

Fructose 6P—–> Fructose 2,6 Bisphosphate

A

PFK 2. Insulin up regulates and Glucagon decreases. PFK 2 stimulates PFK1 and ATP is consumed

18
Q

Glycolysis:

Fructose 6P—-> Fructose 1,6 Bisphosphate

A

PFK-1 (upregulated by PFK2 and AMP). Downregulated by ATP and Citrate. ATP is consumed, irreversible and RATE LIMITING STEP

19
Q

Glycolysis

Fructose 1,6 Bisphosphate —> x2

A

Either Glyceraldehyde 3-P or Dihydroxyacetone - P (DHAP)

20
Q

Glycolysis:

Glyceraldehyde 3-P —-> 1,3 Bisphosphoglycerate

A

Glyceraldehyde 3- Phosphate dehydrogenase, adds a phosphate, catalyses oxidation. NAD+ is reduced to NADH which can then go into ETC if oxygen is present

21
Q

Glycolysis :

1,3 Bisphosphoglycerate —-> 2,3 Bisphosphoglycerate

A

Occurs in the Red blood cells. Enzyme is bisphosphoglycerate mutase.. a mutase can move one functional group from 1 position to another. The net here is 2 ATP/ glucose. RBC have anaerobic glycolysis only, no mitochondria. HBA = decreasing affinity for o2 and unloading in tissues

22
Q

Glycolysis:

1,3 Bisphosphoglycerate—-> 3 Phosphoglycerate

A

3 PK (3 phosphoglycerate kinase) * ATP is produced and example of substrate level phosphorylation (not o2 dependent)

23
Q

Glycolysis:

SUbstrate level phosphorylation enzyme

A

3 phosphoglycerate kinase and pyruvate kinase

24
Q

Glycolysis:

3 phosphoglycerate —-> 2 phosphoglycerate

25
Glycolysis | 2 phosphoglycerate ----> PEP
Enolase
26
Glycolysis: | PEP-----> Pyruvate
Pyruvate kinase is enzyme. Activated by Fructose 1,6 BP. ATP and substrate level phosphorylation. Irreversible
27
Glycolysis: | DHAP- dihydroxyacetone phosphate
Used in hepatic and adipose tissue for triacylglycerol synthesis, formed from F 1,6 BP, Can be isomerized to glycerol 3-P to be converted to glycerol
28
3 Irreverible enzymes of Glycolysis
Gluco/hexokinase, PFK Pyruvate kinase
29
During glycolysis, if oxygen or mitochondria are absent NADH is oxidized by
Lactate dehydrogenase
30
Physiological changes that promote right shift of oxygen dissociation curve
Increased 2,3 BPG, low pH, Exercise, High pCO2.
31
Three traits of amino acids
Non polar, non aromatic, non polar