DNA Replication Flashcards

1
Q

Nucleic Acids

A

Macromolecules that encode genetic material and direct gene expression

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2
Q

2 nucleic acids used by human cells

A

DNA and RNA

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3
Q

What are the monomers of nucleic acids?

A

Nucleotides

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4
Q

3 parts of nucleotides

A

Phosphate
Sugar
Base

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5
Q

Pentose sugar

A

Sugar used in DNA and RNA
Contains 5 carbons

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6
Q

Sugar used in DNA

A

Deoxyribose

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7
Q

Sugar used in RNA

A

Ribose

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8
Q

Difference between deoxyribose and ribose

A

Ribose has OH on carbon 2
Deoxy has H on carbon 2

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9
Q

Phosphodiester bond

A

C5 of each sugar bonds to phosphate molecule, and can react with OH group on C3 of another nucleotide sugar

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10
Q

What does a phosphodiester bond result in?

A

Sugar-phosphate backbone of DNA

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11
Q

4 DNA bases

A

Adenine
Thymine
Cytosine
Guanine

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12
Q

Primary Structure

A

Sequence of nucleotide bases in a single strand of nucleic acid

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13
Q

2 types bases can be divided into

A

Purines
Pyrimidines

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14
Q

Purines

A

Large bases
Contain 2 rings

Adenine and Guanine

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15
Q

Pyrimidines

A

Smaller bases
Contain only 1 ring

Thymine and cytosine

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16
Q

Complementary base pairing

A

Bases of 1 DNA strand bond to bases of another strand
Each base can only bond with its pairing

Purine must always bond to a Pyrimidine

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17
Q

Hydrogen bonds

A

Types of bonds formed between bases
Hydrogen atom of 1 base is attracted to nitrogen/oxygen atom of another base

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18
Q

Are hydrogen bonds stronger or weaker than ionic/covalent bonds?

A

Weaker (allows bonds to break with ease)

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19
Q

What bases form 2 hydrogen bonds

A

Adenine and thymine

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20
Q

What bases form 3 hydrogen bonds

A

Cytosine and guanine

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21
Q

What’s the secondary structure of DNA?

A

Complementary base pairing

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22
Q

Antiparallel

A

Sugar phosphate backbones face opposite directions

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23
Q

Is sugar phosphate backbone hydrophilic or hydrophobic?

A

Hydrophilic

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24
Q

Are bases hydrophobic or hydrophilic?

A

Hydrophobic

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25
Minor groove
Smallest groove within helix of DNA Occurs where overlapping backbones are closest together
26
Major groove
Occurs where gap btw backbones is greatest Allows easy access for protein attachment
27
Supercoiling
DNA attaches to histone proteins and spools up DNA like fishing rod to keep it compact in nucleus
28
Chromatin
Combination of DNA and histone
29
What is the 4th structure of DNA
Chromatin
30
3 steps in DNA replication
Initiation Elongation Terminator
31
What does DNA replication require?
Pre existing DNA Free nucleotides Enzymes
32
Initiation and what does it involve
First step of DNA replication Involves unwinding of double helix and breaking of hydrogen bonds
33
What does topoisomerase do?
Unwinds double helix of DNA exposing nucleotide bases making it easier for enzymes to attach
34
Helicase
Enzyme that breaks apart hydrogen bonds, separating the 2 strands
35
Where does helicase attach to?
Origins of replication once helicase has unzipped strands
36
Primers
Short sequence of RNA that serve as starting point for DNA synthesis
37
Elongation
Second stage in DNA replication New DNA strands are synthesized
38
Semi conservative
Resulting DNA is a combination of parent strands and daughter strands
39
How do free nucleotides temporarily attach to open DNA strands?
Hydrogen Bonding
40
How does DNA polymerase synthesize daughter strands?
Fuses nucleotides together via sugar phosphate backbone
41
Replication fork
Opening in DNA behind helicase
42
Leading strand
Daughter strand in replication fork being synthesized in 5’ to 3’ direction
43
Lagging strand
Daughter strand in replication fork being synthesized in 3’ to 5’ direction
44
Okazaki fragments
Short sequences of lagging strand DNA
45
What enzyme is used to fuse Okazaki fragments together?
Ligase
46
What’s another job of DNA polymerase?
To proofread daughter strands as they are being produced
47
What happens if DNA polymerase fails to catch when a wrong nucleotide is added?
Mutation
48
Termination
Third and final stage in DNA replication DNA copies are finalized and safe guarded from degradation
49
Termination sites
Found along parent strands Direct helicase and DNA polymerase to detach
50
What do termination sites end in?
Replication fork
51
What occurs before last nucleotide in DNA strand?
Termination sites
52
What are the ends of chromosomes protected by?
Telomeres
53
Telomeres
Long sequences of DNA that protect chromosome from damage
54
What repeating sequence do human telomeres consist of?
TTAGGG
55
When do telomeres add the repeating TTAGGG sequence?
After final replication fork
56
What do telomeres lack?
The ability to code for proteins Don’t contain any hereditary information
57
What happens when telomeres are used up due to excessive replications?
Genetic information is lost severely impacting organism health
58
What happens when telomeres are lost?
Chromosomes can no longer replicate Can’t heal, grow or reproduce
59
Hayflick limit
Number of times DNA can replicate before using up all its telomeres
60
Senescence
Process of shortening your telomeres over time (cellular aging)