gene control eukaryotic Flashcards

(41 cards)

1
Q

transcription control

A

chromatin structure regulation- inactivates 75 percent by changing into chromatid
transcription initiation control- do you let rna polymerase bind or no

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2
Q

post transcription control

A

RNA transcript processing
mRNA degradation- breaking down
Translation initiation- hold mRNA, block it

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3
Q

post translational control

A

allosteric Protein, Protein processing, Protein degradation

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4
Q

chromatin structure control

A

Heterochromatin
acetylation
DNA methylation

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5
Q

Heterochromatin

A

Chromatin that remains tightly compacted even in interphase

genes not transcribed- ex barr bodies

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6
Q

acetylation

A

acetyl group (-COCH3) bonded to histone
loosens up chromatin winding
promotes transcription

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7
Q

DNA methylation

A

. –CH3 bonds to DNA blocking transcription
methylated regions passed on to daughter
cells

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8
Q

which chromatin structure controls are passed on

A

heterochromatin

DNA methylation, acetylation NOT passed on

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9
Q

control elements

A

non-coding DNA up-stream from promotor that bind transcription factor proteins

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10
Q

initiation control

A
control elements (distal and proximal) 
transcription factors
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11
Q

distal control elements

A

are far up-stream

often act as enhancers (DNA),Each enhancer works with only one gene ,

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12
Q

proximal control elements

A

near promotor

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13
Q

transcription factors

A

proteins needed for transcription initiation, regulatory protein binds control elements

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14
Q

general transcription factors (GTF)

A

needed for all transcription of genes
allow slow (repressors) or fast (activators) transcription of genes
One protein of the GTF will bind to a
section of promotor called the TATA box

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15
Q

initiation complex

A

GTFs bind each other & RNA Polym. II to form initiation complex

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16
Q

what does initiation complex bind to

A

Initiation complex binds to control elements near promotor: start transcription

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17
Q

specific transcription factors

A

needed for rapid transcription of gene

18
Q

Things part of DNA

A

control elements
enhancers
TATA box
promotor

19
Q

enhancers

A

distal (far) control elements, can be activated or repressed by transcription factor proteins

20
Q

TATA box

A

section of promotors code

21
Q

promotor

A

just upstream from start of gene, where RNA polymerase binds to start transcription

22
Q

Things that are proteins

A

transcription factors

mediator proteins

23
Q

mediator proteins

A

form link between regulatory proteins and DNA

24
Q

transcription factors called activator proteins bind

A

enhancer control elements

25
fold DNA so that the activator protein/enhancer complex binds to
initiation complex to speed up transcription
26
how do repressors slow transcription
by binding to distal control elements and keeping activators out or By binding to activator proteins
27
GTF go with
proximal
28
STF go with
distal
29
5.coordination of functionally related genes
same DNA sequences in one of their control elements | one general transcription factor can activate all the genes
30
post transcription control
RNA processing mRNA degradation Translation initiation control
31
RNA processing
alternative splicing poly A tail length cap designation
32
Translation initiation control
proteins bond to mRNA prevent initiation egg mRNA global control : lack of initiation factor (egg)
33
Post Translation Control : Protein Processing/degradation
Allosteric control or activation by phosphate protein processing a. inactive form cut to activate (pro-insulin) b. glycoproteins, lipoproteins selective degradation a. ubiquitin
34
ubiquitin
= protein attached to proteins tags them for destruction
35
noncoding RNA
dont code for protein microRNA small interfering RNA ncRNA affect heterochromatin formation
36
microRNAs (miRNAs)
complexes w/ proteins binds to complementary mRNA stops translation or trigger degradation
37
small interfering RNA (siRNA)
turn off gene expression | Used in knock-out experiments
38
monitoring gene expression to see which cells are using a gene to do
in situ hybridization (in situ = in place)
39
Monitoring gene expression
need to detect mRNA made from that gene, he mRNA from the gene of interest = template fluorescent dye added to probe probe added to solution around embryo probe hybridizes to target mRNA & concentrates in cells that are using the gene of interest
40
hybridization
= bonding complementary bases to a template
41
complementary strand
= probe (DNA or RNA