c39 lec 6.5 and 7 Flashcards

(78 cards)

1
Q

what is the main function of B cells

A

to produce antibodies

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2
Q

where are antibodies present

A

in the blood, lymph, and extracellular fluids

where they bind to extracellular bacteria and viral particles

also found at mucosal surfaces

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3
Q

how are B cells activated?

A

multiple surface B cell receptors bind to the same antigen and this causes B cell receptors (BCRs) to cluster together … this clustering and CROSS linking sending activation signals into the B cell

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4
Q

antigen interactions with IgM-BCRs on a B cell surface bring multiple BCRs close together

A

cross linking

this allows for signalling cascades to proceed and induce activation

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5
Q

describe the structure of a T cell receptor (TCR)

A

made up of 2 polypeptides, alpha chain and beta chain

have a variable and constant region

(V alpha and B beta, C alpha and C beta)

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6
Q

what type of pathogens are presented on MHC class I to mediate cell killing

A

intracellular pathogens

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7
Q

what type of pathogens are what professional antigen presenting cells uptake, process and present on MHC class II

A

extracellular pathogens

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8
Q

why are CD4 helper T cells called help cells? what help do they provide?

A

they produce cytokines, this helps macrophages degrade the pathogens that they uptake and furthermore they help B cells with the production of antibodies

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9
Q

proteins are degraded into peptides that can be loaded onto MHC molecules

A

antigen processing

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10
Q

pathogens proteins are broken down into peptides (in the cytosol) moved to the ER and then to plasma membrane to be present on MHC class ____

A

MHC class I

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11
Q

protein transports proteasome peptides to the ER for loading of MHC class I proteins

A

TAP: transporter associated with antigen processing

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12
Q

MHC class I is assembled where and then transported to where

A

ER to plasma membrane/cell membrane

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13
Q

where does peptide loading happen for MHC class I

A

in the ER

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14
Q

trims peptides to the right size for MHC class I antigen presentation

A

endoplasmic reticulum aminopeptidase (ERAP)

because peptides must be within a specific size range for MHC class I

  • happens in the ER but it happens after the peptide is loaded
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15
Q

where does MHC class II get made

A

in the ER

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16
Q

how do we ensure that peptides that are supposed to bind to MHC class I don’t bind to MHC class II in the ER

A

CLIP: class II associated invariant chain peptide: MHC class II presentation is carefully regulated by multiple proteins including CLIP

  • CLIP basically takes up MHC II binding pocket in the ER so peptides don’t bind
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17
Q

antigens are brought in through MHC II pathway in professional antigen presenting cells (pAPCs) but presented on MHC class I to activate CD8 T cells

A

cross-presentation : only applies to pAPCS

its when extracellular antigens are presented on MHC class I

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18
Q

white blood cells move from blood into tissues

A

diapedesis/extravasation

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19
Q

if T cells recognize class I in the thymus then is it

A

CD8 cytotoxic T cells

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20
Q

if T cells recognize class II in the thymus then it is

A

CD4 helper T cells

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21
Q

_______proteins are co-receptors to the TCR that also ensure that CD4 helper T cells bind to MHC class II and CD8 cytotoxic T cells bind to MHC class I

A

CD4 and CD8

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22
Q

what are the three signals that T cells require to be activated?

A
  1. TCR and CD4 and CD8 co-receptor recognize a specific peptide presented on MHC class II/I
  2. costimulatory receptor, CD28, binding to B7 on antigen presenting cell (APC) that is presenting antigen
  3. cytokines
  • need all signals for the T cell to be activated
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23
Q

what is the T cell inhibitory co-receptor and what is the T cell activation co- receptor

A

activation: CD28
inhibitory/no activation: CTLA-4

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24
Q

once T cell gets first and second activating signal what happens

A

it starts to produce IL2

the IL2 goes into external environment and acts on the T cell that made it

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25
activated T cells make IL2 for it to act back on those same cells
autocrine action
26
after IL2 binds to T cell what happens
this makes T cell replicate/proliferate many times and produce many clones with same peptide
27
what is IL2
an autocrine cytokine that acts as the third and final signal for T cell activation
28
IL2 acts as a
autocrine cytokine
29
before any of the three signals in T cell activation, what do we need to happen?
dendritic cells break down pathogen into peptides/antigens and then are loaded onto MHC I and II
30
unresponsive to antigen
anergy
31
what is the main role of CD4 t cells
help other immune cells when they are trying to deal with pathogens - can help macrophages, can help activate antibodies etc
32
CD8 T cells cannot do their function unless the first time they interact with MHC
they interact with pAPC
33
forces T cells to interact with things that they are not specific for
superantigens
34
ADAPTIVE IMMUNE cells learn from
first infection...this is called memory
35
what kind of immunity generates memory
adaptive immunity
36
majority of activated B cells that survive the germinal center reaction become
plasma cells some of these become memory cells
37
one _____ helps determine if the B cell is a plasma cell or memory cell
cytokine
38
when our body creates an immune response itself
active immunity
39
when we are given things that help us be immune to things
passive immunity
40
activated CD4 and CD8 T cells both generate
effector (TE) and memory T cells (TM)
41
what are the three types of memory T cells?
central memory t cells and effector memory t cells and tissue resident memory T cells
42
activated T cells that circulate the body and scan our secondary lymphoid tissues for infection
Central memory T cells (T CM)
43
activated T cells that cannot enter our secondary lymphoid organs, only non lymphoid tissues, to scan for infection
Effector memory T cells (T EM)
44
activated T cells that enter the tissues during repair of tissue damage can remain there and become
tissue resident memory T cells (T RM)
45
antigen interactions with IgM-BCRs on a B cell surface bring multiple BCRs close together
cross linking this allows for signalling cascades to proceed and induce activation
46
what gives the first signal for B cell activation
cross-linking
47
what can lower threshold of activation of B cells
co-receptors - can also bind to antigens along with BCRs
48
antigen binding both ______ and ______ increase the signalling of activation of B cells by 1000-10 000 fold
BCRs and co-receptors = increased sensitivity to the antigen
49
what can B cells walk along in lymphoid organs (lymph nodes)
follicular dendritic cells (FDCs) FDC network guides B cells and presents antigens - not actually dendritic cells!
50
B cells that interact with and bind antigen (pathogen) on FDCs receive _____
1st activation signal (recognizing and binding antigen)
51
how many activating signals do B cells have?
2 1. walks along FDC and binds to antigen 2. from T cell
52
when does B cell receive its 2nd activation signal
after the B cell binds to the antigen, the B cell migrates to the T cell zone ( a special part of the lymph node) At the boundary of the B cell follicle and T cell zone it will meet a CD4 helper T cell that recognizes the same antigen The B cell will then present the antigen to the T cell and there it will receive the 2nd activation signal
53
cell-cell interactions
immunological synpase
54
Pairing of T cells and B cells forms an
immunological synpase
55
T dependent B cells require
T cells
56
what kind of T cells help B cells to get that second activation
CD4 helper T cells
57
what forms the germinal centers
when cognate pairs (helper T cells and B cells) move back to the medullary cords and B cells produce short-lived plasma cells then other B cells move back and proliferate in the B cell area creating the germinal centers
58
evolution on a really fast scale
germinal centers
59
what are the two stages that activated B cells go through within germinal centers?
1. B cells proliferate and mutate their BCR (centroblasts in dark zone) 2. undergo testing and selection to see if those mutations were harmful or beneficial (centrocytes in light zone)
60
a process that introduces random point mutations into the variable (V) region of immunoglobulin (Ig) genes- specifically in activated B cells
somatic hypermutation
61
the more cells stay in germinal centers the more _____ they accumulate
mutations
62
affinity of surviving B cells to antigen increases over time (multiple rounds of somatic hypermutation)
affinity maturation
63
the result of somatic hypermutation
affinity maturation
64
changing the class of immunoglobulin protein without changing the antigen specificity
isotype switching
65
________ mediates somatic hypermutation and isotype switching (class switch recombination)
AID: activation-induced cytidine deaminase - involved in both somatic hypermutation and isotype switching
66
immunoglobulins(Ig)/antibodies differ in their
constant region (Fc region)
67
what are the five different classes of immunoglobulins
1. IgG 2. IgM 3. IgD 4. IgA 5. IgE
68
the first BCR and secreted antibody that is made
IgM
69
the second BCR that is made
IgD - dominant BCR on the surface of anergic B cells - no class/isotype switching for IgD - mostly made as a BCR not an antibody
70
the main antibody produced in our associated lymphoid tissues, keep commensal bacteria in check most abundant class of antibody forms dimers
IgA (think most abundant antibody, starts with A, a for abundant: IgA) - typically can only make IgA after the B cell has been activated - helps with gasteroinestinal or mucosal stuff - not free floating, sits on epithelial surfaces etc
71
receptor mediated transport from one side of a cell to the other
transcytosis
72
recruits granuloctes and induces effector functions (degranulation) involved in allergy!!!!
IgE - we cannot phagocytose parasitic pathogens, so IgE helps us evolve methods to eject/eliminate them from our bodies - theres also IgE mediated pathogen killing by granules
73
most abundant immunoglobulin in our body fluids (lymph and blood) most flexible of the immunoglobulin family due to hinge region
IgG
74
IgG is transported from
blood to tissues (transcytosis)
75
NK cells can recognize human cells that are coated with specific IgGs and kill them
ADCC: antibody dependent cell-mediated cytotoxicity
76
which immunoglobulin do we typically not make as an antibody
IgD
77
if we lack AID what kind of antibody will the body primarily produce?
igM antibodies
78
another name for the CLIP chain is
the invariant chain: blocks peptide loading on to MHC Class II in the ER blocks loading of self-peptides instead of foreign peptides